RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 FMR1Q06787 632 aaKnown RBP eCLIP8.86□□□□□ -0.99
GYPB-206ENST00000506516 HDAC1Q13547 482 aaPredicted RBP8.86□□□□□ -0.99
GYPB-206ENST00000506516 DEFB115Q30KQ5 88 aa8.86□□□□□ -0.99
GYPB-206ENST00000506516 CDCA5Q96FF9 252 aa8.86□□□□□ -0.99
GYPB-206ENST00000506516 DEFB129Q9H1M3 183 aa8.86□□□□□ -0.99
GYPB-206ENST00000506516 SNRKQ9NRH2 765 aa8.86□□□□□ -0.99
GYPB-206ENST00000506516 TLR7Q9NYK1 1049 aaKnown RBP8.86□□□□□ -0.99
GYPB-206ENST00000506516 RAI14Q9P0K7 980 aa8.86□□□□□ -0.99
GYPB-206ENST00000506516 ZNF70Q9UC06 446 aaPredicted RBP8.86□□□□□ -0.99
GYPB-206ENST00000506516 PCDHAC2Q9Y5I4 1007 aa8.86□□□□□ -0.99
GYPB-206ENST00000506516 PPP2R3BQ9Y5P8 575 aa8.86□□□□□ -0.99
GYPB-206ENST00000506516 PSME4Q14997 1843 aa8.86□□□□□ -0.99
GYPB-206ENST00000506516 SMARCA5O60264 1052 aaPredicted RBP8.85□□□□□ -0.99
GYPB-206ENST00000506516 CYP2E1P05181 493 aaPredicted RBP8.85□□□□□ -0.99
GYPB-206ENST00000506516 MECOMQ03112 1051 aa8.85□□□□□ -0.99
GYPB-206ENST00000506516 RASA3Q14644 834 aa8.85□□□□□ -0.99
GYPB-206ENST00000506516 TTF1Q15361 905 aaPredicted RBP8.85□□□□□ -0.99
GYPB-206ENST00000506516 SUPT20HL1Q3ZLR7 823 aa8.85□□□□□ -0.99
GYPB-206ENST00000506516 APOBEC3HQ6NTF7 200 aaKnown RBP8.85□□□□□ -0.99
GYPB-206ENST00000506516 TBC1D9Q6ZT07 1266 aa8.85□□□□□ -0.99
GYPB-206ENST00000506516 GPIHBP1Q8IV16 184 aa8.85□□□□□ -0.99
GYPB-206ENST00000506516 DNAJC5GQ8N7S2 189 aa8.85□□□□□ -0.99
GYPB-206ENST00000506516 GPATCH3Q96I76 525 aa8.85□□□□□ -0.99
GYPB-206ENST00000506516 USP40Q9NVE5 1235 aa8.85□□□□□ -0.99
GYPB-206ENST00000506516 SCAF8Q9UPN6 1271 aaKnown RBP8.85□□□□□ -0.99
GYPB-206ENST00000506516 TCP10L2B9ZVM9 353 aa8.84□□□□□ -0.99
GYPB-206ENST00000506516 BAG3O95817 575 aa8.84□□□□□ -0.99
GYPB-206ENST00000506516 MAP4K4O95819 1239 aaPredicted RBP8.84□□□□□ -0.99
GYPB-206ENST00000506516 ATP5JP18859 108 aa8.84□□□□□ -0.99
GYPB-206ENST00000506516 ECE1P42892 770 aa8.84□□□□□ -0.99
GYPB-206ENST00000506516 ZAP70P43403 619 aa8.84□□□□□ -0.99
GYPB-206ENST00000506516 FKBP1BP68106 108 aa8.84□□□□□ -0.99
GYPB-206ENST00000506516 MAP3K12Q12852 859 aa8.84□□□□□ -0.99
GYPB-206ENST00000506516 TTLL12Q14166 644 aaPredicted RBP8.84□□□□□ -0.99
GYPB-206ENST00000506516 DIXDC1Q155Q3 683 aa8.84□□□□□ -0.99
GYPB-206ENST00000506516 ANKRD45Q5TZF3 282 aa8.84□□□□□ -0.99
GYPB-206ENST00000506516 FKBP1CQ5VVH2 108 aa8.84□□□□□ -0.99
GYPB-206ENST00000506516 PRAMEF18Q5VWM3 479 aa8.84□□□□□ -0.99
GYPB-206ENST00000506516 NAA16Q6N069 864 aaPredicted RBP8.84□□□□□ -0.99
GYPB-206ENST00000506516 TMED8Q6PL24 325 aaPredicted RBP8.84□□□□□ -0.99
GYPB-206ENST00000506516 PI16Q6UXB8 463 aa8.84□□□□□ -0.99
GYPB-206ENST00000506516 DLK2Q6UY11 383 aa8.84□□□□□ -0.99
GYPB-206ENST00000506516 SAPCD2Q86UD0 394 aa8.84□□□□□ -0.99
GYPB-206ENST00000506516 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.84□□□□□ -0.99
GYPB-206ENST00000506516 DDX12PQ92771 950 aa8.84□□□□□ -0.99
GYPB-206ENST00000506516 NSUN4Q96CB9 384 aaKnown RBP8.84□□□□□ -0.99
GYPB-206ENST00000506516 KLRG1Q96E93 195 aa8.84□□□□□ -0.99
GYPB-206ENST00000506516 HHIPL1Q96JK4 782 aa8.84□□□□□ -0.99
GYPB-206ENST00000506516 NOL10Q9BSC4 688 aaKnown RBP8.84□□□□□ -0.99
GYPB-206ENST00000506516 GBA2Q9HCG7 927 aaPredicted RBP8.84□□□□□ -0.99
GYPB-206ENST00000506516 MKRN1Q9UHC7 482 aaKnown RBP8.84□□□□□ -0.99
GYPB-206ENST00000506516 DAGLAQ9Y4D2 1042 aa8.84□□□□□ -0.99
GYPB-206ENST00000506516 TLL2Q9Y6L7 1015 aa8.84□□□□□ -0.99
GYPB-206ENST00000506516 COL1A1P02452 1464 aaPredicted RBP8.83□□□□□ -1
GYPB-206ENST00000506516 RASSF10A6NK89 507 aa8.83□□□□□ -1
GYPB-206ENST00000506516 PPP1R12BO60237 982 aaPredicted RBP8.83□□□□□ -1
GYPB-206ENST00000506516 HOXB3P14651 431 aaPredicted RBP8.83□□□□□ -1
GYPB-206ENST00000506516 HUNKP57058 714 aa8.83□□□□□ -1
GYPB-206ENST00000506516 CDC42EP5Q6NZY7 148 aa8.83□□□□□ -1
GYPB-206ENST00000506516 ARMC9Q7Z3E5 817 aa8.83□□□□□ -1
GYPB-206ENST00000506516 FAM83AQ86UY5 434 aa8.83□□□□□ -1
GYPB-206ENST00000506516 HOOK2Q96ED9 719 aa8.83□□□□□ -1
GYPB-206ENST00000506516 BOLA2Q9H3K6 86 aa8.83□□□□□ -1
GYPB-206ENST00000506516 ECHDC1Q9NTX5 307 aa8.83□□□□□ -1
GYPB-206ENST00000506516 PCDHGA4Q9Y5G9 962 aa8.83□□□□□ -1
GYPB-206ENST00000506516 MROH7-TTC4A0A0A0MT08 1334 aa8.82□□□□□ -1
GYPB-206ENST00000506516 GAKO14976 1311 aa8.82□□□□□ -1
GYPB-206ENST00000506516 GPR75-ASB3A0A0A6YYF3 556 aa8.82□□□□□ -1
GYPB-206ENST00000506516 IDH1O75874 414 aaKnown RBP8.82□□□□□ -1
GYPB-206ENST00000506516 BTDP43251 543 aa8.82□□□□□ -1
GYPB-206ENST00000506516 IRX6P78412 446 aaPredicted RBP8.82□□□□□ -1
GYPB-206ENST00000506516 FAM151AQ8WW52 585 aa8.82□□□□□ -1
GYPB-206ENST00000506516 CCDC102AQ96A19 550 aa8.82□□□□□ -1
GYPB-206ENST00000506516 DNAJC2Q99543 621 aaKnown RBP8.82□□□□□ -1
GYPB-206ENST00000506516 HAUS7Q99871 368 aa8.82□□□□□ -1
GYPB-206ENST00000506516 CNTNAP1P78357 1384 aa8.82□□□□□ -1
GYPB-206ENST00000506516 ARAP2Q8WZ64 1704 aa8.82□□□□□ -1
GYPB-206ENST00000506516 AOX1Q06278 1338 aa8.81□□□□□ -1
GYPB-206ENST00000506516 UNCXA6NJT0 531 aa8.81□□□□□ -1
GYPB-206ENST00000506516 GOLIM4O00461 696 aa8.81□□□□□ -1
GYPB-206ENST00000506516 ERC2O15083 957 aa8.81□□□□□ -1
GYPB-206ENST00000506516 CYP7A1P22680 504 aa8.81□□□□□ -1
GYPB-206ENST00000506516 VEGFBP49765 207 aa8.81□□□□□ -1
GYPB-206ENST00000506516 ZNF157P51786 506 aaPredicted RBP8.81□□□□□ -1
GYPB-206ENST00000506516 CACNB3P54284 484 aa8.81□□□□□ -1
GYPB-206ENST00000506516 TCP10Q12799 353 aa8.81□□□□□ -1
GYPB-206ENST00000506516 PRKG1Q13976 671 aa8.81□□□□□ -1
GYPB-206ENST00000506516 NBPF12Q5TAG4 269 aaPredicted RBP8.81□□□□□ -1
GYPB-206ENST00000506516 ZSCAN25Q6NSZ9 544 aa8.81□□□□□ -1
GYPB-206ENST00000506516 RGMBQ6NW40 437 aa8.81□□□□□ -1
GYPB-206ENST00000506516 CERS3Q8IU89 383 aa8.81□□□□□ -1
GYPB-206ENST00000506516 IDI2Q9BXS1 227 aa8.81□□□□□ -1
GYPB-206ENST00000506516 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.81□□□□□ -1
GYPB-206ENST00000506516 TMEM39BQ9GZU3 492 aa8.81□□□□□ -1
GYPB-206ENST00000506516 ANTXR1Q9H6X2 564 aa8.81□□□□□ -1
GYPB-206ENST00000506516 PIH1D3Q9NQM4 214 aaKnown RBP8.81□□□□□ -1
GYPB-206ENST00000506516 PAG1Q9NWQ8 432 aa8.81□□□□□ -1
GYPB-206ENST00000506516 ANGEL1Q9UNK9 670 aaKnown RBP8.81□□□□□ -1
GYPB-206ENST00000506516 NDUFB9Q9Y6M9 179 aa8.81□□□□□ -1
GYPB-206ENST00000506516 ZNF646O15015 1829 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms