RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 LRFN4Q6PJG9 635 aa9.21□□□□□ -0.94
HERC4-213ENST00000506515 IGF2-ASQ6U949 168 aa9.21□□□□□ -0.94
HERC4-213ENST00000506515 ELMO3Q96BJ8 720 aa9.21□□□□□ -0.94
HERC4-213ENST00000506515 PLPPR2Q96GM1 343 aa9.21□□□□□ -0.94
HERC4-213ENST00000506515 WDR18Q9BV38 432 aa9.21□□□□□ -0.94
HERC4-213ENST00000506515 CSADQ9Y600 493 aa9.21□□□□□ -0.94
HERC4-213ENST00000506515 GRIN3BO60391 1043 aa9.2□□□□□ -0.94
HERC4-213ENST00000506515 SLFN14P0C7P3 912 aa9.2□□□□□ -0.94
HERC4-213ENST00000506515 SOX9P48436 509 aa9.2□□□□□ -0.94
HERC4-213ENST00000506515 COL9A2Q14055 689 aaPredicted RBP9.2□□□□□ -0.94
HERC4-213ENST00000506515 KIF4BQ2VIQ3 1234 aa9.2□□□□□ -0.94
HERC4-213ENST00000506515 AKAP4Q5JQC9 854 aa9.2□□□□□ -0.94
HERC4-213ENST00000506515 SHISA2Q6UWI4 295 aa9.2□□□□□ -0.94
HERC4-213ENST00000506515 GK5Q6ZS86 529 aa9.2□□□□□ -0.94
HERC4-213ENST00000506515 CPLX3Q8WVH0 158 aa9.2□□□□□ -0.94
HERC4-213ENST00000506515 UBXN4Q92575 508 aa9.2□□□□□ -0.94
HERC4-213ENST00000506515 INSM1Q01101 510 aaPredicted RBP9.19□□□□□ -0.94
HERC4-213ENST00000506515 NUTM2GQ5VZR2 741 aa9.19□□□□□ -0.94
HERC4-213ENST00000506515 FBXW10Q5XX13 1052 aa9.19□□□□□ -0.94
HERC4-213ENST00000506515 CCDC81Q6ZN84 652 aa9.19□□□□□ -0.94
HERC4-213ENST00000506515 KIAA1211Q6ZU35 1233 aa9.19□□□□□ -0.94
HERC4-213ENST00000506515 HDXQ7Z353 690 aa9.19□□□□□ -0.94
HERC4-213ENST00000506515 C12orf40Q86WS4 652 aa9.19□□□□□ -0.94
HERC4-213ENST00000506515 MRPL18Q9H0U6 180 aaKnown RBP9.19□□□□□ -0.94
HERC4-213ENST00000506515 PPT2Q9UMR5 302 aa9.19□□□□□ -0.94
HERC4-213ENST00000506515 ZNF165P49910 485 aa9.18□□□□□ -0.94
HERC4-213ENST00000506515 AGGF1Q8N302 714 aaeCLIP9.18□□□□□ -0.94
HERC4-213ENST00000506515 TMPRSS13Q9BYE2 586 aa9.18□□□□□ -0.94
HERC4-213ENST00000506515 RNF208Q9H0X6 261 aa9.18□□□□□ -0.94
HERC4-213ENST00000506515 POLR3KQ9Y2Y1 108 aaPredicted RBP9.18□□□□□ -0.94
HERC4-213ENST00000506515 PCDHB14Q9Y5E9 798 aa9.18□□□□□ -0.94
HERC4-213ENST00000506515 MRVI1Q9Y6F6 885 aa9.18□□□□□ -0.94
HERC4-213ENST00000506515 SNCAIPQ9Y6H5 919 aa9.18□□□□□ -0.94
HERC4-213ENST00000506515 PRAMEF27A3QJZ7 478 aa9.17□□□□□ -0.94
HERC4-213ENST00000506515 GFRA2O00451 464 aa9.17□□□□□ -0.94
HERC4-213ENST00000506515 CLCQ05315 142 aa9.17□□□□□ -0.94
HERC4-213ENST00000506515 ZC3H12AQ5D1E8 599 aaKnown RBP9.17□□□□□ -0.94
HERC4-213ENST00000506515 FERD3LQ96RJ6 166 aa9.17□□□□□ -0.94
HERC4-213ENST00000506515 DNAJC2Q99543 621 aaKnown RBP9.17□□□□□ -0.94
HERC4-213ENST00000506515 CYP4F12Q9HCS2 524 aa9.17□□□□□ -0.94
HERC4-213ENST00000506515 USP21Q9UK80 565 aa9.17□□□□□ -0.94
HERC4-213ENST00000506515 STK10O94804 968 aaKnown RBP9.16□□□□□ -0.94
HERC4-213ENST00000506515 SPATA31C1P0DKV0 1188 aa9.16□□□□□ -0.94
HERC4-213ENST00000506515 ID3Q02535 119 aa9.16□□□□□ -0.94
HERC4-213ENST00000506515 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.16□□□□□ -0.94
HERC4-213ENST00000506515 SCARF2Q96GP6 870 aaPredicted RBP9.16□□□□□ -0.94
HERC4-213ENST00000506515 SRRTQ9BXP5 876 aaKnown RBP9.16□□□□□ -0.94
HERC4-213ENST00000506515 PICK1Q9NRD5 415 aa9.16□□□□□ -0.94
HERC4-213ENST00000506515 PPP1R9AQ9ULJ8 1098 aa9.16□□□□□ -0.94
HERC4-213ENST00000506515 AP4E1Q9UPM8 1137 aa9.16□□□□□ -0.94
HERC4-213ENST00000506515 PCDHGC5Q9Y5F6 944 aa9.16□□□□□ -0.94
HERC4-213ENST00000506515 MEGF11A6BM72 1044 aa9.15□□□□□ -0.94
HERC4-213ENST00000506515 TMPRSS2O15393 492 aa9.15□□□□□ -0.94
HERC4-213ENST00000506515 ALX3O95076 343 aa9.15□□□□□ -0.94
HERC4-213ENST00000506515 DRD2P14416 443 aa9.15□□□□□ -0.94
HERC4-213ENST00000506515 PPM1JQ5JR12 505 aa9.15□□□□□ -0.94
HERC4-213ENST00000506515 REXO1Q8N1G1 1221 aaKnown RBP9.15□□□□□ -0.94
HERC4-213ENST00000506515 C12orf50Q8NA57 414 aaPredicted RBP9.15□□□□□ -0.94
HERC4-213ENST00000506515 ANAPC16Q96DE5 110 aa9.15□□□□□ -0.94
HERC4-213ENST00000506515 STRIP2Q9ULQ0 834 aa9.15□□□□□ -0.94
HERC4-213ENST00000506515 HIF3AQ9Y2N7 669 aa9.15□□□□□ -0.94
HERC4-213ENST00000506515 CORINQ9Y5Q5 1042 aa9.15□□□□□ -0.94
HERC4-213ENST00000506515 F8W735 103 aaPredicted RBP9.14□□□□□ -0.95
HERC4-213ENST00000506515 COL8A1P27658 744 aa9.14□□□□□ -0.95
HERC4-213ENST00000506515 FDX2Q6P4F2 183 aa9.14□□□□□ -0.95
HERC4-213ENST00000506515 CYFIP1Q7L576 1253 aa9.14□□□□□ -0.95
HERC4-213ENST00000506515 ZNF408Q9H9D4 720 aa9.14□□□□□ -0.95
HERC4-213ENST00000506515 ADH5P11766 374 aa9.13□□□□□ -0.95
HERC4-213ENST00000506515 ETFBP38117 255 aa9.13□□□□□ -0.95
HERC4-213ENST00000506515 DYMQ7RTS9 669 aa9.13□□□□□ -0.95
HERC4-213ENST00000506515 SMG8Q8ND04 991 aaKnown RBP9.13□□□□□ -0.95
HERC4-213ENST00000506515 ARMC5Q96C12 935 aa9.13□□□□□ -0.95
HERC4-213ENST00000506515 CRBNQ96SW2 442 aa9.13□□□□□ -0.95
HERC4-213ENST00000506515 SUGCTQ9HAC7 445 aa9.13□□□□□ -0.95
HERC4-213ENST00000506515 CRIM1Q9NZV1 1036 aa9.13□□□□□ -0.95
HERC4-213ENST00000506515 SYNGAP1Q96PV0 1343 aa9.12□□□□□ -0.95
HERC4-213ENST00000506515 HTR3BO95264 441 aa9.12□□□□□ -0.95
HERC4-213ENST00000506515 APBA3O96018 575 aa9.12□□□□□ -0.95
HERC4-213ENST00000506515 PLCG1P19174 1290 aa9.12□□□□□ -0.95
HERC4-213ENST00000506515 GRK4P32298 578 aa9.12□□□□□ -0.95
HERC4-213ENST00000506515 EIF6P56537 245 aaKnown RBP9.12□□□□□ -0.95
HERC4-213ENST00000506515 ETF1P62495 437 aaKnown RBP9.12□□□□□ -0.95
HERC4-213ENST00000506515 ERVK-24P63145 666 aa9.12□□□□□ -0.95
HERC4-213ENST00000506515 SOX4Q06945 474 aaPredicted RBP9.12□□□□□ -0.95
HERC4-213ENST00000506515 TMEM130Q8N3G9 435 aa9.12□□□□□ -0.95
HERC4-213ENST00000506515 PMFBP1Q8TBY8 1022 aa9.12□□□□□ -0.95
HERC4-213ENST00000506515 LENG1Q96BZ8 264 aaPredicted RBP9.12□□□□□ -0.95
HERC4-213ENST00000506515 SHDQ96IW2 340 aa9.12□□□□□ -0.95
HERC4-213ENST00000506515 FANCD2OSQ96PS1 177 aa9.12□□□□□ -0.95
HERC4-213ENST00000506515 AKTIPQ9H8T0 292 aa9.12□□□□□ -0.95
HERC4-213ENST00000506515 EHMT1Q9H9B1 1298 aa9.12□□□□□ -0.95
HERC4-213ENST00000506515 ZNRF3Q9ULT6 936 aa9.12□□□□□ -0.95
HERC4-213ENST00000506515 PDE4BQ07343 736 aa9.11□□□□□ -0.95
HERC4-213ENST00000506515 DISC1Q9NRI5 854 aa9.11□□□□□ -0.95
HERC4-213ENST00000506515 C9orf172C9J069 976 aa9.1□□□□□ -0.95
HERC4-213ENST00000506515 ATE1O95260 518 aa9.1□□□□□ -0.95
HERC4-213ENST00000506515 PGRP06401 933 aa9.1□□□□□ -0.95
HERC4-213ENST00000506515 IMPDH2P12268 514 aa9.1□□□□□ -0.95
HERC4-213ENST00000506515 GLB1P16278 677 aa9.1□□□□□ -0.95
HERC4-213ENST00000506515 RING1Q06587 406 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms