RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 TMEM106CQ9BVX2 250 aa7.32□□□□□ -1.24
GYPB-205ENST00000505583 ZNF341Q9BYN7 854 aa7.32□□□□□ -1.24
GYPB-205ENST00000505583 TSPYL2Q9H2G4 693 aaPredicted RBP7.32□□□□□ -1.24
GYPB-205ENST00000505583 PA2G4Q9UQ80 394 aaKnown RBP7.32□□□□□ -1.24
GYPB-205ENST00000505583 SUGT1Q9Y2Z0 365 aa7.32□□□□□ -1.24
GYPB-205ENST00000505583 MAST3O60307 1309 aa7.31□□□□□ -1.24
GYPB-205ENST00000505583 PHF20L1A8MW92 1017 aa7.31□□□□□ -1.24
GYPB-205ENST00000505583 E9PSI1 815 aa7.31□□□□□ -1.24
GYPB-205ENST00000505583 PDHXO00330 501 aa7.31□□□□□ -1.24
GYPB-205ENST00000505583 CYP2C8P10632 490 aa7.31□□□□□ -1.24
GYPB-205ENST00000505583 DOCK1Q14185 1865 aa7.31□□□□□ -1.24
GYPB-205ENST00000505583 ATP2B3Q16720 1220 aa7.31□□□□□ -1.24
GYPB-205ENST00000505583 SLC4A8Q2Y0W8 1093 aa7.31□□□□□ -1.24
GYPB-205ENST00000505583 DCAF15Q66K64 600 aa7.31□□□□□ -1.24
GYPB-205ENST00000505583 GPAT2Q6NUI2 795 aa7.31□□□□□ -1.24
GYPB-205ENST00000505583 TRMT2AQ8IZ69 625 aaKnown RBP7.31□□□□□ -1.24
GYPB-205ENST00000505583 SHISA4Q96DD7 197 aa7.31□□□□□ -1.24
GYPB-205ENST00000505583 ZCCHC17Q9NP64 241 aaKnown RBP7.31□□□□□ -1.24
GYPB-205ENST00000505583 SMC4Q9NTJ3 1288 aa7.31□□□□□ -1.24
GYPB-205ENST00000505583 USP40Q9NVE5 1235 aa7.31□□□□□ -1.24
GYPB-205ENST00000505583 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.31□□□□□ -1.24
GYPB-205ENST00000505583 KCNH4Q9UQ05 1017 aa7.31□□□□□ -1.24
GYPB-205ENST00000505583 COLQQ9Y215 455 aaPredicted RBP7.31□□□□□ -1.24
GYPB-205ENST00000505583 LRRFIP2Q9Y608 721 aaKnown RBP7.31□□□□□ -1.24
GYPB-205ENST00000505583 RFX7Q2KHR2 1363 aa7.31□□□□□ -1.24
GYPB-205ENST00000505583 ATAD5Q96QE3 1844 aa7.3□□□□□ -1.24
GYPB-205ENST00000505583 H0YGN5 161 aa7.3□□□□□ -1.24
GYPB-205ENST00000505583 CIAO1O76071 339 aa7.3□□□□□ -1.24
GYPB-205ENST00000505583 LDHBP07195 334 aaKnown RBP7.3□□□□□ -1.24
GYPB-205ENST00000505583 UBTFL1P0CB47 393 aaPredicted RBP7.3□□□□□ -1.24
GYPB-205ENST00000505583 OSBPP22059 807 aa7.3□□□□□ -1.24
GYPB-205ENST00000505583 PSMC4P43686 418 aa7.3□□□□□ -1.24
GYPB-205ENST00000505583 RGS3P49796 1198 aa7.3□□□□□ -1.24
GYPB-205ENST00000505583 FXR1P51114 621 aaKnown RBP eCLIP7.3□□□□□ -1.24
GYPB-205ENST00000505583 TIMM10P62072 90 aa7.3□□□□□ -1.24
GYPB-205ENST00000505583 ALDH1L2Q3SY69 923 aa7.3□□□□□ -1.24
GYPB-205ENST00000505583 NOL9Q5SY16 702 aaKnown RBP7.3□□□□□ -1.24
GYPB-205ENST00000505583 CCDC102BQ68D86 513 aa7.3□□□□□ -1.24
GYPB-205ENST00000505583 ANKRD23Q86SG2 305 aa7.3□□□□□ -1.24
GYPB-205ENST00000505583 NBPF11Q86T75 865 aa7.3□□□□□ -1.24
GYPB-205ENST00000505583 CCDC84Q86UT8 332 aaPredicted RBP7.3□□□□□ -1.24
GYPB-205ENST00000505583 ZNF384Q8TF68 577 aa7.3□□□□□ -1.24
GYPB-205ENST00000505583 GCC1Q96CN9 775 aa7.3□□□□□ -1.24
GYPB-205ENST00000505583 HOOK2Q96ED9 719 aa7.3□□□□□ -1.24
GYPB-205ENST00000505583 MEIS3Q99687 375 aa7.3□□□□□ -1.24
GYPB-205ENST00000505583 CEP126Q9P2H0 1117 aa7.3□□□□□ -1.24
GYPB-205ENST00000505583 SRRDQ9UH36 339 aa7.3□□□□□ -1.24
GYPB-205ENST00000505583 NOB1Q9ULX3 412 aaKnown RBP7.3□□□□□ -1.24
GYPB-205ENST00000505583 GAKO14976 1311 aa7.29□□□□□ -1.24
GYPB-205ENST00000505583 SALL1Q9NSC2 1324 aa7.29□□□□□ -1.24
GYPB-205ENST00000505583 DDTLA6NHG4 134 aaPredicted RBP7.29□□□□□ -1.24
GYPB-205ENST00000505583 FAM196BA6NMK8 535 aa7.29□□□□□ -1.24
GYPB-205ENST00000505583 WDHD1O75717 1129 aaPredicted RBP7.29□□□□□ -1.24
GYPB-205ENST00000505583 BCRP11274 1271 aa7.29□□□□□ -1.24
GYPB-205ENST00000505583 ZEB1P37275 1124 aaPredicted RBP7.29□□□□□ -1.24
GYPB-205ENST00000505583 PRKCZQ05513 592 aa7.29□□□□□ -1.24
GYPB-205ENST00000505583 RASGRF1Q13972 1273 aa7.29□□□□□ -1.24
GYPB-205ENST00000505583 KIF22Q14807 665 aa7.29□□□□□ -1.24
GYPB-205ENST00000505583 ARHGEF6Q15052 776 aa7.29□□□□□ -1.24
GYPB-205ENST00000505583 COPRSQ9NQ92 184 aa7.29□□□□□ -1.24
GYPB-205ENST00000505583 DDX4Q9NQI0 724 aaKnown RBP7.29□□□□□ -1.24
GYPB-205ENST00000505583 GABRQQ9UN88 632 aa7.29□□□□□ -1.24
GYPB-205ENST00000505583 TNNQ9UQP3 1299 aa7.29□□□□□ -1.24
GYPB-205ENST00000505583 ZHX2Q9Y6X8 837 aa7.29□□□□□ -1.24
GYPB-205ENST00000505583 MYO5AQ9Y4I1 1855 aaKnown RBP7.29□□□□□ -1.24
GYPB-205ENST00000505583 SIPA1L1O43166 1804 aa7.29□□□□□ -1.24
GYPB-205ENST00000505583 DOCK3Q8IZD9 2030 aa7.28□□□□□ -1.24
GYPB-205ENST00000505583 MYPNQ86TC9 1320 aa7.28□□□□□ -1.24
GYPB-205ENST00000505583 CDK5RAP2Q96SN8 1893 aa7.28□□□□□ -1.24
GYPB-205ENST00000505583 STK25O00506 426 aa7.28□□□□□ -1.24
GYPB-205ENST00000505583 FMNL1O95466 1100 aaPredicted RBP7.28□□□□□ -1.24
GYPB-205ENST00000505583 GNRH1P01148 92 aa7.28□□□□□ -1.24
GYPB-205ENST00000505583 CCL5P13501 91 aa7.28□□□□□ -1.24
GYPB-205ENST00000505583 PTPRAP18433 802 aa7.28□□□□□ -1.24
GYPB-205ENST00000505583 GRK4P32298 578 aa7.28□□□□□ -1.24
GYPB-205ENST00000505583 IL15P40933 162 aaPredicted RBP7.28□□□□□ -1.24
GYPB-205ENST00000505583 MAP3K10Q02779 954 aa7.28□□□□□ -1.24
GYPB-205ENST00000505583 PI16Q6UXB8 463 aa7.28□□□□□ -1.24
GYPB-205ENST00000505583 UBE2Q1Q7Z7E8 422 aa7.28□□□□□ -1.24
GYPB-205ENST00000505583 SCYL3Q8IZE3 742 aa7.28□□□□□ -1.24
GYPB-205ENST00000505583 IDI2Q9BXS1 227 aa7.28□□□□□ -1.24
GYPB-205ENST00000505583 GNL3LQ9NVN8 582 aaKnown RBP7.28□□□□□ -1.24
GYPB-205ENST00000505583 ABCF2Q9UG63 623 aa7.28□□□□□ -1.24
GYPB-205ENST00000505583 DENND2AQ9ULE3 1009 aa7.28□□□□□ -1.24
GYPB-205ENST00000505583 AFG3L2Q9Y4W6 797 aa7.28□□□□□ -1.24
GYPB-205ENST00000505583 ALPK3Q96L96 1907 aa7.28□□□□□ -1.24
GYPB-205ENST00000505583 LOC285556D6RIA3 1793 aa7.28□□□□□ -1.24
GYPB-205ENST00000505583 A0A0G2JLL6 359 aaPredicted RBP7.27□□□□□ -1.25
GYPB-205ENST00000505583 A0A1B0GUL7 405 aa7.27□□□□□ -1.25
GYPB-205ENST00000505583 CXCL11O14625 94 aa7.27□□□□□ -1.25
GYPB-205ENST00000505583 SEMA3EO15041 775 aa7.27□□□□□ -1.25
GYPB-205ENST00000505583 ENTPD3O75355 529 aa7.27□□□□□ -1.25
GYPB-205ENST00000505583 ELNP15502 786 aa7.27□□□□□ -1.25
GYPB-205ENST00000505583 BTDP43251 543 aa7.27□□□□□ -1.25
GYPB-205ENST00000505583 PRMT2P55345 433 aa7.27□□□□□ -1.25
GYPB-205ENST00000505583 RHBDL3P58872 404 aa7.27□□□□□ -1.25
GYPB-205ENST00000505583 MECOMQ03112 1051 aa7.27□□□□□ -1.25
GYPB-205ENST00000505583 TFCP2Q12800 502 aa7.27□□□□□ -1.25
GYPB-205ENST00000505583 PICALMQ13492 652 aa7.27□□□□□ -1.25
GYPB-205ENST00000505583 RRP1BQ14684 758 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms