RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 MAP3K9P80192 1104 aa13.66□□□□□ -0.22
UBE3D-206ENST00000505226 DHX8Q14562 1220 aaKnown RBP13.66□□□□□ -0.22
UBE3D-206ENST00000505226 CCDC102BQ68D86 513 aa13.66□□□□□ -0.22
UBE3D-206ENST00000505226 KIFC2Q96AC6 838 aa13.66□□□□□ -0.22
UBE3D-206ENST00000505226 IRX2Q9BZI1 471 aaPredicted RBP13.66□□□□□ -0.22
UBE3D-206ENST00000505226 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.66□□□□□ -0.22
UBE3D-206ENST00000505226 MAN1B1Q9UKM7 699 aa13.66□□□□□ -0.22
UBE3D-206ENST00000505226 AKAP2Q9Y2D5 859 aa13.66□□□□□ -0.22
UBE3D-206ENST00000505226 KCPQ6ZWJ8 1503 aa13.66□□□□□ -0.22
UBE3D-206ENST00000505226 RIC1Q4ADV7 1423 aa13.66□□□□□ -0.22
UBE3D-206ENST00000505226 ADAMTSL3P82987 1691 aa13.66□□□□□ -0.22
UBE3D-206ENST00000505226 MYH7P12883 1935 aa13.66□□□□□ -0.22
UBE3D-206ENST00000505226 A0A0U1RQJ8 604 aa13.66□□□□□ -0.22
UBE3D-206ENST00000505226 ARHGAP6O43182 974 aa13.66□□□□□ -0.22
UBE3D-206ENST00000505226 ZNF18P17022 549 aa13.66□□□□□ -0.22
UBE3D-206ENST00000505226 MTF1Q14872 753 aa13.66□□□□□ -0.22
UBE3D-206ENST00000505226 ATRIPQ8WXE1 791 aa13.66□□□□□ -0.22
UBE3D-206ENST00000505226 BAG1Q99933 345 aaPredicted RBP13.66□□□□□ -0.22
UBE3D-206ENST00000505226 DESI2Q9BSY9 194 aa13.66□□□□□ -0.22
UBE3D-206ENST00000505226 LY9Q9HBG7 655 aa13.66□□□□□ -0.22
UBE3D-206ENST00000505226 CCP110O43303 1012 aa13.66□□□□□ -0.22
UBE3D-206ENST00000505226 CUTAO60888 179 aa13.66□□□□□ -0.22
UBE3D-206ENST00000505226 GNG11P61952 73 aa13.66□□□□□ -0.22
UBE3D-206ENST00000505226 OLFM4Q6UX06 510 aa13.66□□□□□ -0.22
UBE3D-206ENST00000505226 PROSER2Q86WR7 435 aaPredicted RBP13.66□□□□□ -0.22
UBE3D-206ENST00000505226 PDILTQ8N807 584 aa13.66□□□□□ -0.22
UBE3D-206ENST00000505226 BTBD18B2RXH4 712 aa13.65□□□□□ -0.22
UBE3D-206ENST00000505226 GNL2Q13823 731 aaKnown RBP13.65□□□□□ -0.22
UBE3D-206ENST00000505226 ZNF330Q9Y3S2 320 aaPredicted RBP13.65□□□□□ -0.22
UBE3D-206ENST00000505226 RIPOR2Q9Y4F9 1068 aa13.65□□□□□ -0.22
UBE3D-206ENST00000505226 APPP05067 770 aa13.65□□□□□ -0.22
UBE3D-206ENST00000505226 ST5P78524 1137 aa13.65□□□□□ -0.22
UBE3D-206ENST00000505226 TRDNQ13061 729 aa13.65□□□□□ -0.22
UBE3D-206ENST00000505226 TCIRG1Q13488 830 aa13.65□□□□□ -0.22
UBE3D-206ENST00000505226 USP49Q70CQ1 688 aa13.65□□□□□ -0.22
UBE3D-206ENST00000505226 FCHSD1Q86WN1 690 aa13.65□□□□□ -0.22
UBE3D-206ENST00000505226 JMYQ8N9B5 988 aa13.65□□□□□ -0.22
UBE3D-206ENST00000505226 SAMSN1Q9NSI8 373 aaKnown RBP13.65□□□□□ -0.22
UBE3D-206ENST00000505226 TMEM51Q9NW97 253 aa13.65□□□□□ -0.22
UBE3D-206ENST00000505226 NFE2L3Q9Y4A8 694 aa13.65□□□□□ -0.22
UBE3D-206ENST00000505226 MRFAP1Q9Y605 127 aa13.65□□□□□ -0.22
UBE3D-206ENST00000505226 ZBTB43O43298 467 aa13.65□□□□□ -0.23
UBE3D-206ENST00000505226 CSF1RP07333 972 aa13.65□□□□□ -0.23
UBE3D-206ENST00000505226 IARSP41252 1262 aaKnown RBP13.65□□□□□ -0.23
UBE3D-206ENST00000505226 CC2D1AQ6P1N0 951 aaPredicted RBP13.65□□□□□ -0.23
UBE3D-206ENST00000505226 RSRC2Q7L4I2 434 aaKnown RBP13.65□□□□□ -0.23
UBE3D-206ENST00000505226 SRRTQ9BXP5 876 aaKnown RBP13.65□□□□□ -0.23
UBE3D-206ENST00000505226 MRPL44Q9H9J2 332 aaKnown RBP13.65□□□□□ -0.23
UBE3D-206ENST00000505226 WWC3Q9ULE0 1092 aa13.65□□□□□ -0.23
UBE3D-206ENST00000505226 KCNJ14Q9UNX9 436 aa13.65□□□□□ -0.23
UBE3D-206ENST00000505226 UBR2Q8IWV8 1755 aa13.64□□□□□ -0.23
UBE3D-206ENST00000505226 ZSCAN12O43309 604 aa13.64□□□□□ -0.23
UBE3D-206ENST00000505226 HNRNPH2P55795 449 aaKnown RBP13.64□□□□□ -0.23
UBE3D-206ENST00000505226 SLC26A6Q9BXS9 759 aa13.64□□□□□ -0.23
UBE3D-206ENST00000505226 TEX13AQ9BXU3 409 aaPredicted RBP13.64□□□□□ -0.23
UBE3D-206ENST00000505226 ZNF532Q9HCE3 1301 aa13.64□□□□□ -0.23
UBE3D-206ENST00000505226 CCDC66A2RUB6 948 aa13.64□□□□□ -0.23
UBE3D-206ENST00000505226 POLR2DO15514 142 aaKnown RBP13.64□□□□□ -0.23
UBE3D-206ENST00000505226 IDH1O75874 414 aaKnown RBP13.64□□□□□ -0.23
UBE3D-206ENST00000505226 SARSP49591 514 aaKnown RBP13.64□□□□□ -0.23
UBE3D-206ENST00000505226 IRX5P78411 483 aaPredicted RBP13.64□□□□□ -0.23
UBE3D-206ENST00000505226 CMTR1Q8N1G2 835 aaKnown RBP13.64□□□□□ -0.23
UBE3D-206ENST00000505226 KRI1Q8N9T8 703 aaKnown RBP13.64□□□□□ -0.23
UBE3D-206ENST00000505226 RGS22Q8NE09 1264 aa13.64□□□□□ -0.23
UBE3D-206ENST00000505226 MPHOSPH8Q99549 860 aa13.64□□□□□ -0.23
UBE3D-206ENST00000505226 ZSWIM5Q9P217 1185 aa13.64□□□□□ -0.23
UBE3D-206ENST00000505226 SERTAD1Q9UHV2 236 aa13.64□□□□□ -0.23
UBE3D-206ENST00000505226 FBXO2Q9UK22 296 aaPredicted RBP13.64□□□□□ -0.23
UBE3D-206ENST00000505226 CASQ1P31415 396 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 CTDSPL2Q05D32 466 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 KARSQ15046 597 aaKnown RBP13.63□□□□□ -0.23
UBE3D-206ENST00000505226 SPECC1LQ69YQ0 1117 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 DHX58Q96C10 678 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 TCRBV5S4A2TA0A5A2 114 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 GOLGA8AA7E2F4 631 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 STX10O60499 249 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 CDKL5O76039 1030 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 PPP2R3AQ06190 1150 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 IFIT5Q13325 482 aaKnown RBP13.63□□□□□ -0.23
UBE3D-206ENST00000505226 POSTNQ15063 836 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 NT5DC1Q5TFE4 455 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 NFXL1Q6ZNB6 911 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 NOSTRINQ8IVI9 506 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 NEK11Q8NG66 645 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 CCDC34Q96HJ3 373 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 PARD6BQ9BYG5 372 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 GREM2Q9H772 168 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 ARGLU1Q9NWB6 273 aaPredicted RBP13.63□□□□□ -0.23
UBE3D-206ENST00000505226 TAF7LQ5H9L4 462 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 TMEM67Q5HYA8 995 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 METTL24Q5JXM2 366 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 TEX35Q5T0J7 233 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 SGMS1Q86VZ5 419 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 EPB41L4AQ9HCS5 686 aaPredicted RBP13.63□□□□□ -0.23
UBE3D-206ENST00000505226 PCDHB6Q9Y5E3 794 aa13.63□□□□□ -0.23
UBE3D-206ENST00000505226 TEX33O43247 280 aa13.62□□□□□ -0.23
UBE3D-206ENST00000505226 FAM193AP78312 1265 aa13.62□□□□□ -0.23
UBE3D-206ENST00000505226 NR5A1Q13285 461 aa13.62□□□□□ -0.23
UBE3D-206ENST00000505226 MORC3Q14149 939 aa13.62□□□□□ -0.23
UBE3D-206ENST00000505226 CCDC82Q8N4S0 544 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms