RNA–Protein interactions for RNA: ENST00000505119.1

NEK1-202, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-202ENST00000505119 MSMPQ1L6U9 139 aa9.6□□□□□ -0.87
NEK1-202ENST00000505119 LLGL2Q6P1M3 1020 aa9.6□□□□□ -0.87
NEK1-202ENST00000505119 DNAJC14Q6Y2X3 702 aaPredicted RBP9.6□□□□□ -0.87
NEK1-202ENST00000505119 NPAS4Q8IUM7 802 aa9.6□□□□□ -0.87
NEK1-202ENST00000505119 TTF2Q9UNY4 1162 aaKnown RBP9.6□□□□□ -0.87
NEK1-202ENST00000505119 CYP26A1O43174 497 aa9.59□□□□□ -0.87
NEK1-202ENST00000505119 HCLS1P14317 486 aaPredicted RBP9.59□□□□□ -0.87
NEK1-202ENST00000505119 DUSP27Q5VZP5 1158 aa9.59□□□□□ -0.87
NEK1-202ENST00000505119 PCNX4Q63HM2 1172 aa9.59□□□□□ -0.87
NEK1-202ENST00000505119 ZNF765Q7L2R6 523 aa9.59□□□□□ -0.87
NEK1-202ENST00000505119 GRIN3AQ8TCU5 1115 aa9.59□□□□□ -0.87
NEK1-202ENST00000505119 DUSP9Q99956 384 aaKnown RBP9.59□□□□□ -0.87
NEK1-202ENST00000505119 MPRIPQ6WCQ1 1025 aa9.58□□□□□ -0.88
NEK1-202ENST00000505119 LGR6Q9HBX8 967 aa9.58□□□□□ -0.88
NEK1-202ENST00000505119 CYP8B1Q9UNU6 501 aa9.58□□□□□ -0.88
NEK1-202ENST00000505119 AK5Q9Y6K8 562 aa9.58□□□□□ -0.88
NEK1-202ENST00000505119 NEFMP07197 916 aa9.57□□□□□ -0.88
NEK1-202ENST00000505119 GP2P55259 537 aaKnown RBP9.57□□□□□ -0.88
NEK1-202ENST00000505119 RASIP1Q5U651 963 aa9.57□□□□□ -0.88
NEK1-202ENST00000505119 OGFOD3Q6PK18 319 aa9.57□□□□□ -0.88
NEK1-202ENST00000505119 SV2BQ7L1I2 683 aa9.57□□□□□ -0.88
NEK1-202ENST00000505119 RNF214Q8ND24 703 aa9.57□□□□□ -0.88
NEK1-202ENST00000505119 RNGTTO60942 597 aaKnown RBP9.56□□□□□ -0.88
NEK1-202ENST00000505119 ADAMTS4O75173 837 aa9.56□□□□□ -0.88
NEK1-202ENST00000505119 WNT11O96014 354 aa9.56□□□□□ -0.88
NEK1-202ENST00000505119 CDK5R2Q13319 367 aa9.56□□□□□ -0.88
NEK1-202ENST00000505119 ISL2Q96A47 359 aa9.56□□□□□ -0.88
NEK1-202ENST00000505119 PCOLCE2Q9UKZ9 415 aa9.56□□□□□ -0.88
NEK1-202ENST00000505119 PRNPP04156 253 aa9.55□□□□□ -0.88
NEK1-202ENST00000505119 CYP27C1Q4G0S4 372 aa9.55□□□□□ -0.88
NEK1-202ENST00000505119 LRRC4CQ9HCJ2 640 aa9.55□□□□□ -0.88
NEK1-202ENST00000505119 RNF19AQ9NV58 838 aa9.54□□□□□ -0.88
NEK1-202ENST00000505119 ANGEL1Q9UNK9 670 aaKnown RBP9.54□□□□□ -0.88
NEK1-202ENST00000505119 OAS3Q9Y6K5 1087 aaKnown RBP9.54□□□□□ -0.88
NEK1-202ENST00000505119 FAM87AP0C7U9 286 aa9.53□□□□□ -0.88
NEK1-202ENST00000505119 VSIG10LQ86VR7 867 aa9.53□□□□□ -0.88
NEK1-202ENST00000505119 BSDC1Q9NW68 430 aaPredicted RBP9.53□□□□□ -0.88
NEK1-202ENST00000505119 PCDHA4Q9UN74 947 aa9.53□□□□□ -0.88
NEK1-202ENST00000505119 NTF4P34130 210 aa9.52□□□□□ -0.89
NEK1-202ENST00000505119 CCDC85BQ15834 202 aaPredicted RBP9.52□□□□□ -0.89
NEK1-202ENST00000505119 CCDC27Q2M243 656 aa9.52□□□□□ -0.89
NEK1-202ENST00000505119 PPM1JQ5JR12 505 aa9.52□□□□□ -0.89
NEK1-202ENST00000505119 TTBK2Q6IQ55 1244 aa9.52□□□□□ -0.89
NEK1-202ENST00000505119 FBXO33Q7Z6M2 555 aa9.52□□□□□ -0.89
NEK1-202ENST00000505119 SSU72Q9NP77 194 aaKnown RBP9.52□□□□□ -0.89
NEK1-202ENST00000505119 CCDC39Q9UFE4 941 aa9.52□□□□□ -0.89
NEK1-202ENST00000505119 PARP2Q9UGN5 583 aa9.52□□□□□ -0.89
NEK1-202ENST00000505119 DCDC2CA8MYV0 355 aa9.51□□□□□ -0.89
NEK1-202ENST00000505119 FANCGO15287 622 aa9.51□□□□□ -0.89
NEK1-202ENST00000505119 ERCC3P19447 782 aa9.51□□□□□ -0.89
NEK1-202ENST00000505119 DAB2P98082 770 aa9.51□□□□□ -0.89
NEK1-202ENST00000505119 RING1Q06587 406 aa9.51□□□□□ -0.89
NEK1-202ENST00000505119 PSMD2Q13200 908 aa9.51□□□□□ -0.89
NEK1-202ENST00000505119 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.51□□□□□ -0.89
NEK1-202ENST00000505119 GAL3ST3Q96A11 431 aa9.51□□□□□ -0.89
NEK1-202ENST00000505119 PSMG3-AS1Q96PY0 264 aa9.51□□□□□ -0.89
NEK1-202ENST00000505119 PICK1Q9NRD5 415 aa9.51□□□□□ -0.89
NEK1-202ENST00000505119 ZC3H7BQ9UGR2 993 aaKnown RBP9.51□□□□□ -0.89
NEK1-202ENST00000505119 RPS26P62854 115 aaKnown RBP9.5□□□□□ -0.89
NEK1-202ENST00000505119 ZBTB37Q5TC79 503 aa9.5□□□□□ -0.89
NEK1-202ENST00000505119 ELMO3Q96BJ8 720 aa9.5□□□□□ -0.89
NEK1-202ENST00000505119 DUSP23Q9BVJ7 150 aa9.5□□□□□ -0.89
NEK1-202ENST00000505119 CSADQ9Y600 493 aa9.5□□□□□ -0.89
NEK1-202ENST00000505119 TMC4Q7Z404 712 aa9.49□□□□□ -0.89
NEK1-202ENST00000505119 C12orf40Q86WS4 652 aa9.49□□□□□ -0.89
NEK1-202ENST00000505119 GZF1Q9H116 711 aaPredicted RBP9.49□□□□□ -0.89
NEK1-202ENST00000505119 IRAK1P51617 712 aa9.48□□□□□ -0.89
NEK1-202ENST00000505119 XPCQ01831 940 aaPredicted RBP9.48□□□□□ -0.89
NEK1-202ENST00000505119 FBXL18Q96ME1 805 aa9.48□□□□□ -0.89
NEK1-202ENST00000505119 LEFTY1O75610 366 aa9.47□□□□□ -0.89
NEK1-202ENST00000505119 LMNB1P20700 586 aa9.47□□□□□ -0.89
NEK1-202ENST00000505119 ST13P50502 369 aaKnown RBP9.47□□□□□ -0.89
NEK1-202ENST00000505119 PTPN11Q06124 597 aaPredicted RBP9.47□□□□□ -0.89
NEK1-202ENST00000505119 MEI1Q5TIA1 1274 aa9.47□□□□□ -0.89
NEK1-202ENST00000505119 MCTP1Q6DN14 999 aa9.47□□□□□ -0.89
NEK1-202ENST00000505119 LRFN4Q6PJG9 635 aa9.47□□□□□ -0.89
NEK1-202ENST00000505119 NFXL1Q6ZNB6 911 aa9.47□□□□□ -0.89
NEK1-202ENST00000505119 TOP6BLQ8N6T0 577 aa9.47□□□□□ -0.89
NEK1-202ENST00000505119 KCT2Q8NC54 265 aa9.47□□□□□ -0.89
NEK1-202ENST00000505119 LIG3P49916 1009 aa9.46□□□□□ -0.9
NEK1-202ENST00000505119 INPP5AQ14642 412 aa9.46□□□□□ -0.9
NEK1-202ENST00000505119 CYFIP1Q7L576 1253 aa9.46□□□□□ -0.9
NEK1-202ENST00000505119 HDXQ7Z353 690 aa9.46□□□□□ -0.9
NEK1-202ENST00000505119 PLPPR2Q96GM1 343 aa9.46□□□□□ -0.9
NEK1-202ENST00000505119 MKNK2Q9HBH9 465 aa9.46□□□□□ -0.9
NEK1-202ENST00000505119 PRAMEF27A3QJZ7 478 aa9.45□□□□□ -0.9
NEK1-202ENST00000505119 RLBP1P12271 317 aa9.45□□□□□ -0.9
NEK1-202ENST00000505119 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.45□□□□□ -0.9
NEK1-202ENST00000505119 AGMOQ6ZNB7 445 aa9.45□□□□□ -0.9
NEK1-202ENST00000505119 CDC37L1Q7L3B6 337 aa9.45□□□□□ -0.9
NEK1-202ENST00000505119 UBE3DQ7Z6J8 389 aa9.45□□□□□ -0.9
NEK1-202ENST00000505119 CRELD1Q96HD1 420 aa9.45□□□□□ -0.9
NEK1-202ENST00000505119 NOC4LQ9BVI4 516 aaKnown RBP9.45□□□□□ -0.9
NEK1-202ENST00000505119 SNCAIPQ9Y6H5 919 aa9.45□□□□□ -0.9
NEK1-202ENST00000505119 COL17A1Q9UMD9 1497 aaPredicted RBP9.45□□□□□ -0.9
NEK1-202ENST00000505119 TAF1CQ15572 869 aaPredicted RBP9.44□□□□□ -0.9
NEK1-202ENST00000505119 WIPI1Q5MNZ9 446 aaPredicted RBP9.44□□□□□ -0.9
NEK1-202ENST00000505119 ABI1Q8IZP0 508 aa9.44□□□□□ -0.9
NEK1-202ENST00000505119 STK11IPQ8N1F8 1099 aa9.44□□□□□ -0.9
NEK1-202ENST00000505119 FAM181AQ8N9Y4 354 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms