RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 NBPF12Q5TAG4 269 aaPredicted RBP10.82□□□□□ -0.68
CDH6-202ENST00000504835 FAM198AQ9UFP1 575 aa10.82□□□□□ -0.68
CDH6-202ENST00000504835 IFIT5Q13325 482 aaKnown RBP10.81□□□□□ -0.68
CDH6-202ENST00000504835 LMBR1LQ6UX01 489 aa10.81□□□□□ -0.68
CDH6-202ENST00000504835 ZNF775Q96BV0 537 aaPredicted RBP10.81□□□□□ -0.68
CDH6-202ENST00000504835 PPP2R3BQ9Y5P8 575 aa10.81□□□□□ -0.68
CDH6-202ENST00000504835 MANSC4A6NHS7 340 aaPredicted RBP10.8□□□□□ -0.68
CDH6-202ENST00000504835 USP2O75604 605 aaPredicted RBP10.8□□□□□ -0.68
CDH6-202ENST00000504835 ZBTB48P10074 688 aaPredicted RBP10.8□□□□□ -0.68
CDH6-202ENST00000504835 SLC4A3P48751 1232 aa10.8□□□□□ -0.68
CDH6-202ENST00000504835 ZNF804AQ7Z570 1209 aa10.8□□□□□ -0.68
CDH6-202ENST00000504835 SLC10A4Q96EP9 437 aa10.8□□□□□ -0.68
CDH6-202ENST00000504835 RBM27Q9P2N5 1060 aaKnown RBP10.8□□□□□ -0.68
CDH6-202ENST00000504835 CHMP3Q9Y3E7 222 aa10.8□□□□□ -0.68
CDH6-202ENST00000504835 SALL2Q9Y467 1007 aaPredicted RBP10.8□□□□□ -0.68
CDH6-202ENST00000504835 FAM205AQ6ZU69 1335 aa10.8□□□□□ -0.68
CDH6-202ENST00000504835 PLIN1O60240 522 aa10.79□□□□□ -0.68
CDH6-202ENST00000504835 ALDH1A1P00352 501 aa10.79□□□□□ -0.68
CDH6-202ENST00000504835 OTOP1Q7RTM1 612 aa10.79□□□□□ -0.68
CDH6-202ENST00000504835 KAZALD1Q96I82 304 aa10.79□□□□□ -0.68
CDH6-202ENST00000504835 PTPN18Q99952 460 aa10.79□□□□□ -0.68
CDH6-202ENST00000504835 VEZTQ9HBM0 779 aa10.79□□□□□ -0.68
CDH6-202ENST00000504835 GRM8O00222 908 aa10.78□□□□□ -0.68
CDH6-202ENST00000504835 PPP1R12BO60237 982 aaPredicted RBP10.78□□□□□ -0.68
CDH6-202ENST00000504835 INHBEP58166 350 aa10.78□□□□□ -0.68
CDH6-202ENST00000504835 RASA3Q14644 834 aa10.78□□□□□ -0.68
CDH6-202ENST00000504835 GRIK5Q16478 980 aa10.78□□□□□ -0.68
CDH6-202ENST00000504835 NUDT18Q6ZVK8 323 aa10.78□□□□□ -0.68
CDH6-202ENST00000504835 WDR63Q8IWG1 891 aa10.78□□□□□ -0.68
CDH6-202ENST00000504835 SLF2Q8IX21 1173 aa10.78□□□□□ -0.68
CDH6-202ENST00000504835 TDRD7Q8NHU6 1098 aaKnown RBP10.78□□□□□ -0.68
CDH6-202ENST00000504835 NKX2-3Q8TAU0 364 aa10.78□□□□□ -0.68
CDH6-202ENST00000504835 TEPSINQ96N21 525 aa10.78□□□□□ -0.68
CDH6-202ENST00000504835 PUS3Q9BZE2 481 aaKnown RBP10.78□□□□□ -0.68
CDH6-202ENST00000504835 TRIM17Q9Y577 477 aa10.78□□□□□ -0.68
CDH6-202ENST00000504835 AK9Q5TCS8 1911 aa10.78□□□□□ -0.68
CDH6-202ENST00000504835 TESPA1A2RU30 521 aaPredicted RBP10.77□□□□□ -0.68
CDH6-202ENST00000504835 UNCXA6NJT0 531 aa10.77□□□□□ -0.68
CDH6-202ENST00000504835 GYG1P46976 350 aa10.77□□□□□ -0.68
CDH6-202ENST00000504835 CRHR2Q13324 411 aa10.77□□□□□ -0.68
CDH6-202ENST00000504835 LDHAL6AQ6ZMR3 332 aa10.77□□□□□ -0.68
CDH6-202ENST00000504835 CD99L2Q8TCZ2 262 aa10.77□□□□□ -0.68
CDH6-202ENST00000504835 ZNF70Q9UC06 446 aaPredicted RBP10.77□□□□□ -0.68
CDH6-202ENST00000504835 MGAMO43451 1857 aa10.77□□□□□ -0.69
CDH6-202ENST00000504835 MYO1BO43795 1136 aa10.77□□□□□ -0.69
CDH6-202ENST00000504835 CCDC57Q2TAC2 916 aa10.77□□□□□ -0.69
CDH6-202ENST00000504835 SUPT20HL1Q3ZLR7 823 aa10.77□□□□□ -0.69
CDH6-202ENST00000504835 SUCLG2Q96I99 432 aa10.77□□□□□ -0.69
CDH6-202ENST00000504835 FAM84BQ96KN1 310 aaPredicted RBP10.77□□□□□ -0.69
CDH6-202ENST00000504835 TDRD3Q9H7E2 651 aaKnown RBP10.77□□□□□ -0.69
CDH6-202ENST00000504835 CNNM1Q9NRU3 951 aa10.77□□□□□ -0.69
CDH6-202ENST00000504835 IREB2P48200 963 aaKnown RBP10.76□□□□□ -0.69
CDH6-202ENST00000504835 RBM5P52756 815 aaKnown RBP eCLIP10.76□□□□□ -0.69
CDH6-202ENST00000504835 COPS2P61201 443 aa10.76□□□□□ -0.69
CDH6-202ENST00000504835 UBE4AQ14139 1066 aa10.76□□□□□ -0.69
CDH6-202ENST00000504835 TMEM132AQ24JP5 1023 aa10.76□□□□□ -0.69
CDH6-202ENST00000504835 MFSD14BQ5SR56 506 aa10.76□□□□□ -0.69
CDH6-202ENST00000504835 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.76□□□□□ -0.69
CDH6-202ENST00000504835 ANKRD13AQ8IZ07 590 aa10.76□□□□□ -0.69
CDH6-202ENST00000504835 PRR14Q9BWN1 585 aa10.76□□□□□ -0.69
CDH6-202ENST00000504835 ELP3Q9H9T3 547 aa10.76□□□□□ -0.69
CDH6-202ENST00000504835 MRS2Q9HD23 443 aa10.76□□□□□ -0.69
CDH6-202ENST00000504835 SERPINA10Q9UK55 444 aa10.76□□□□□ -0.69
CDH6-202ENST00000504835 TTF2Q9UNY4 1162 aaKnown RBP10.76□□□□□ -0.69
CDH6-202ENST00000504835 PTPN22Q9Y2R2 807 aa10.76□□□□□ -0.69
CDH6-202ENST00000504835 RIPOR2Q9Y4F9 1068 aa10.76□□□□□ -0.69
CDH6-202ENST00000504835 GRXCR2A6NFK2 248 aa10.75□□□□□ -0.69
CDH6-202ENST00000504835 C3orf80F5H4A9 247 aa10.75□□□□□ -0.69
CDH6-202ENST00000504835 ALDH1L1O75891 902 aa10.75□□□□□ -0.69
CDH6-202ENST00000504835 NBPF7P0C2Y1 421 aaPredicted RBP10.75□□□□□ -0.69
CDH6-202ENST00000504835 TAF7LQ5H9L4 462 aa10.75□□□□□ -0.69
CDH6-202ENST00000504835 DZIP1LQ8IYY4 767 aaKnown RBP10.75□□□□□ -0.69
CDH6-202ENST00000504835 BRI3BPQ8WY22 251 aa10.75□□□□□ -0.69
CDH6-202ENST00000504835 OPTNQ96CV9 577 aa10.75□□□□□ -0.69
CDH6-202ENST00000504835 TMEM39BQ9GZU3 492 aa10.75□□□□□ -0.69
CDH6-202ENST00000504835 PTPRFP10586 1907 aa10.75□□□□□ -0.69
CDH6-202ENST00000504835 TCP10L2B9ZVM9 353 aa10.74□□□□□ -0.69
CDH6-202ENST00000504835 HIBADHP31937 336 aaKnown RBP10.74□□□□□ -0.69
CDH6-202ENST00000504835 CRKP46108 304 aa10.74□□□□□ -0.69
CDH6-202ENST00000504835 ARMC5Q96C12 935 aa10.74□□□□□ -0.69
CDH6-202ENST00000504835 ERO1AQ96HE7 468 aa10.74□□□□□ -0.69
CDH6-202ENST00000504835 TSHZ2Q9NRE2 1034 aa10.74□□□□□ -0.69
CDH6-202ENST00000504835 C9orf78Q9NZ63 289 aaPredicted RBP10.74□□□□□ -0.69
CDH6-202ENST00000504835 IQSEC3Q9UPP2 1182 aaPredicted RBP10.74□□□□□ -0.69
CDH6-202ENST00000504835 UTYO14607 1347 aa10.74□□□□□ -0.69
CDH6-202ENST00000504835 DOCK2Q92608 1830 aa10.74□□□□□ -0.69
CDH6-202ENST00000504835 SP3Q02447 781 aa10.73□□□□□ -0.69
CDH6-202ENST00000504835 VGLL4Q14135 290 aa10.73□□□□□ -0.69
CDH6-202ENST00000504835 PKDCCQ504Y2 493 aa10.73□□□□□ -0.69
CDH6-202ENST00000504835 LRRC24Q50LG9 513 aa10.73□□□□□ -0.69
CDH6-202ENST00000504835 SLC4A10Q6U841 1118 aa10.73□□□□□ -0.69
CDH6-202ENST00000504835 FBXO33Q7Z6M2 555 aa10.73□□□□□ -0.69
CDH6-202ENST00000504835 ANKRD44Q8N8A2 993 aa10.73□□□□□ -0.69
CDH6-202ENST00000504835 VGLL2Q8N8G2 317 aa10.73□□□□□ -0.69
CDH6-202ENST00000504835 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.73□□□□□ -0.69
CDH6-202ENST00000504835 SRCIN1Q9C0H9 1055 aa10.73□□□□□ -0.69
CDH6-202ENST00000504835 MYH2Q9UKX2 1941 aa10.73□□□□□ -0.69
CDH6-202ENST00000504835 EN2P19622 333 aaPredicted RBP10.73□□□□□ -0.69
CDH6-202ENST00000504835 CACNB3P54284 484 aa10.73□□□□□ -0.69
CDH6-202ENST00000504835 TNFAIP1Q13829 316 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms