RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 TIAM2Q8IVF5 1701 aa11.98□□□□□ -0.49
DDX41-203ENST00000504781 POTECB2RU33 542 aa11.98□□□□□ -0.49
DDX41-203ENST00000504781 USP5P45974 858 aa11.98□□□□□ -0.49
DDX41-203ENST00000504781 HAND2P61296 217 aa11.98□□□□□ -0.49
DDX41-203ENST00000504781 FGD1P98174 961 aa11.98□□□□□ -0.49
DDX41-203ENST00000504781 TOB2Q14106 344 aaPredicted RBP11.98□□□□□ -0.49
DDX41-203ENST00000504781 GRIK5Q16478 980 aa11.98□□□□□ -0.49
DDX41-203ENST00000504781 DACT2Q5SW24 774 aa11.98□□□□□ -0.49
DDX41-203ENST00000504781 CTR9Q6PD62 1173 aa11.98□□□□□ -0.49
DDX41-203ENST00000504781 Q6ZUG5 572 aa11.98□□□□□ -0.49
DDX41-203ENST00000504781 TMEM87BQ96K49 555 aa11.98□□□□□ -0.49
DDX41-203ENST00000504781 EPB41L4AQ9HCS5 686 aaPredicted RBP11.98□□□□□ -0.49
DDX41-203ENST00000504781 DCP1AQ9NPI6 582 aaPredicted RBP11.98□□□□□ -0.49
DDX41-203ENST00000504781 MKRN1Q9UHC7 482 aaKnown RBP11.98□□□□□ -0.49
DDX41-203ENST00000504781 TTF2Q9UNY4 1162 aaKnown RBP11.98□□□□□ -0.49
DDX41-203ENST00000504781 MYH2Q9UKX2 1941 aa11.98□□□□□ -0.49
DDX41-203ENST00000504781 MYO3BQ8WXR4 1341 aa11.97□□□□□ -0.49
DDX41-203ENST00000504781 USP17L12C9JPN9 530 aa11.97□□□□□ -0.49
DDX41-203ENST00000504781 USP17L21D6R901 530 aa11.97□□□□□ -0.49
DDX41-203ENST00000504781 VIL1P09327 827 aaKnown RBP11.97□□□□□ -0.49
DDX41-203ENST00000504781 NUCB2P80303 420 aa11.97□□□□□ -0.49
DDX41-203ENST00000504781 PPARAQ07869 468 aa11.97□□□□□ -0.49
DDX41-203ENST00000504781 AMOTL1Q8IY63 956 aa11.97□□□□□ -0.49
DDX41-203ENST00000504781 MB21D2Q8IYB1 491 aaPredicted RBP11.97□□□□□ -0.49
DDX41-203ENST00000504781 LARGE2Q8N3Y3 721 aa11.97□□□□□ -0.49
DDX41-203ENST00000504781 CERS5Q8N5B7 392 aa11.97□□□□□ -0.49
DDX41-203ENST00000504781 SPRYD3Q8NCJ5 442 aa11.97□□□□□ -0.49
DDX41-203ENST00000504781 SDR42E1Q8WUS8 393 aa11.97□□□□□ -0.49
DDX41-203ENST00000504781 TEKT1Q969V4 418 aa11.97□□□□□ -0.49
DDX41-203ENST00000504781 ZDHHC15Q96MV8 337 aa11.97□□□□□ -0.49
DDX41-203ENST00000504781 ZSWIM5Q9P217 1185 aa11.97□□□□□ -0.49
DDX41-203ENST00000504781 ARPP21Q9UBL0 812 aaPredicted RBP11.97□□□□□ -0.49
DDX41-203ENST00000504781 TAOK2Q9UL54 1235 aa11.97□□□□□ -0.49
DDX41-203ENST00000504781 ZNRF3Q9ULT6 936 aa11.97□□□□□ -0.49
DDX41-203ENST00000504781 FER1L6Q2WGJ9 1857 aa11.97□□□□□ -0.49
DDX41-203ENST00000504781 MINDY4BA8MYZ0 360 aa11.96□□□□□ -0.49
DDX41-203ENST00000504781 NPM3O75607 178 aaKnown RBP11.96□□□□□ -0.49
DDX41-203ENST00000504781 IARSP41252 1262 aaKnown RBP11.96□□□□□ -0.49
DDX41-203ENST00000504781 BTDP43251 543 aa11.96□□□□□ -0.49
DDX41-203ENST00000504781 DIXDC1Q155Q3 683 aa11.96□□□□□ -0.49
DDX41-203ENST00000504781 C12orf60Q5U649 245 aa11.96□□□□□ -0.49
DDX41-203ENST00000504781 SH3RF3Q8TEJ3 882 aaPredicted RBP11.96□□□□□ -0.49
DDX41-203ENST00000504781 FBXW7Q969H0 707 aa11.96□□□□□ -0.49
DDX41-203ENST00000504781 KLRG1Q96E93 195 aa11.96□□□□□ -0.49
DDX41-203ENST00000504781 NBPF3Q9H094 633 aa11.96□□□□□ -0.49
DDX41-203ENST00000504781 ZNF287Q9HBT7 754 aa11.96□□□□□ -0.49
DDX41-203ENST00000504781 KCNQ5Q9NR82 932 aa11.96□□□□□ -0.49
DDX41-203ENST00000504781 SERPINA10Q9UK55 444 aa11.96□□□□□ -0.49
DDX41-203ENST00000504781 TPCN1Q9ULQ1 816 aa11.96□□□□□ -0.49
DDX41-203ENST00000504781 MAST2Q6P0Q8 1798 aa11.95□□□□□ -0.5
DDX41-203ENST00000504781 PRC1O43663 620 aa11.95□□□□□ -0.5
DDX41-203ENST00000504781 ORC4O43929 436 aa11.95□□□□□ -0.5
DDX41-203ENST00000504781 LIFRP42702 1097 aa11.95□□□□□ -0.5
DDX41-203ENST00000504781 RHBDL3P58872 404 aa11.95□□□□□ -0.5
DDX41-203ENST00000504781 CTDSPL2Q05D32 466 aa11.95□□□□□ -0.5
DDX41-203ENST00000504781 PDE4BQ07343 736 aa11.95□□□□□ -0.5
DDX41-203ENST00000504781 ME3Q16798 604 aa11.95□□□□□ -0.5
DDX41-203ENST00000504781 NIM1KQ8IY84 436 aa11.95□□□□□ -0.5
DDX41-203ENST00000504781 AGBL3Q8NEM8 1001 aa11.95□□□□□ -0.5
DDX41-203ENST00000504781 IGDCC4Q8TDY8 1250 aa11.95□□□□□ -0.5
DDX41-203ENST00000504781 TGFBRAP1Q8WUH2 860 aa11.95□□□□□ -0.5
DDX41-203ENST00000504781 JDP2Q8WYK2 163 aa11.95□□□□□ -0.5
DDX41-203ENST00000504781 ESR2Q92731 530 aa11.95□□□□□ -0.5
DDX41-203ENST00000504781 SLKQ9H2G2 1235 aaPredicted RBP11.95□□□□□ -0.5
DDX41-203ENST00000504781 MCM9Q9NXL9 1143 aa11.95□□□□□ -0.5
DDX41-203ENST00000504781 DAGLAQ9Y4D2 1042 aa11.95□□□□□ -0.5
DDX41-203ENST00000504781 WDR90Q96KV7 1748 aa11.94□□□□□ -0.5
DDX41-203ENST00000504781 IQCA1LA6NCM1 817 aa11.94□□□□□ -0.5
DDX41-203ENST00000504781 YDJCA8MPS7 323 aa11.94□□□□□ -0.5
DDX41-203ENST00000504781 B4E1Z4 1266 aa11.94□□□□□ -0.5
DDX41-203ENST00000504781 POTEIP0CG38 1075 aa11.94□□□□□ -0.5
DDX41-203ENST00000504781 POTEJP0CG39 1038 aa11.94□□□□□ -0.5
DDX41-203ENST00000504781 CRKP46108 304 aa11.94□□□□□ -0.5
DDX41-203ENST00000504781 SART3Q15020 963 aaKnown RBP11.94□□□□□ -0.5
DDX41-203ENST00000504781 TNIP1Q15025 636 aa11.94□□□□□ -0.5
DDX41-203ENST00000504781 EAPPQ56P03 285 aaPredicted RBP11.94□□□□□ -0.5
DDX41-203ENST00000504781 CCDC178Q5BJE1 867 aa11.94□□□□□ -0.5
DDX41-203ENST00000504781 IFFO2Q5TF58 517 aa11.94□□□□□ -0.5
DDX41-203ENST00000504781 CHADLQ6NUI6 762 aa11.94□□□□□ -0.5
DDX41-203ENST00000504781 RSBN1LQ6PCB5 846 aaPredicted RBP11.94□□□□□ -0.5
DDX41-203ENST00000504781 TBC1D10CQ8IV04 446 aa11.94□□□□□ -0.5
DDX41-203ENST00000504781 TEX11Q8IYF3 940 aa11.94□□□□□ -0.5
DDX41-203ENST00000504781 BRF1Q92994 677 aa11.94□□□□□ -0.5
DDX41-203ENST00000504781 GMLQ99445 158 aa11.94□□□□□ -0.5
DDX41-203ENST00000504781 LLPHQ9BRT6 129 aaKnown RBP11.94□□□□□ -0.5
DDX41-203ENST00000504781 USP40Q9NVE5 1235 aa11.94□□□□□ -0.5
DDX41-203ENST00000504781 HDAC9Q9UKV0 1011 aa11.94□□□□□ -0.5
DDX41-203ENST00000504781 CLEC11AQ9Y240 323 aa11.94□□□□□ -0.5
DDX41-203ENST00000504781 LAMA4Q16363 1823 aa11.94□□□□□ -0.5
DDX41-203ENST00000504781 ZNF541Q9H0D2 1346 aa11.93□□□□□ -0.5
DDX41-203ENST00000504781 ERICH2A1L162 156 aa11.93□□□□□ -0.5
DDX41-203ENST00000504781 DHX16O60231 1041 aaKnown RBP11.93□□□□□ -0.5
DDX41-203ENST00000504781 PFKFB2O60825 505 aa11.93□□□□□ -0.5
DDX41-203ENST00000504781 POLR3DP05423 398 aaPredicted RBP11.93□□□□□ -0.5
DDX41-203ENST00000504781 PDIA3P30101 505 aaKnown RBP11.93□□□□□ -0.5
DDX41-203ENST00000504781 PPP2R5BQ15173 497 aa11.93□□□□□ -0.5
DDX41-203ENST00000504781 APOBEC3HQ6NTF7 200 aaKnown RBP11.93□□□□□ -0.5
DDX41-203ENST00000504781 TTC6Q86TZ1 520 aa11.93□□□□□ -0.5
DDX41-203ENST00000504781 OGFOD1Q8N543 542 aa11.93□□□□□ -0.5
DDX41-203ENST00000504781 LARP6Q9BRS8 491 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms