RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 STRBPQ96SI9 672 aaKnown RBP15.96■□□□□ 0.15
PDLIM7-212ENST00000504380 TMEM39BQ9GZU3 492 aa15.96■□□□□ 0.15
PDLIM7-212ENST00000504380 DEFB129Q9H1M3 183 aa15.96■□□□□ 0.15
PDLIM7-212ENST00000504380 IL25Q9H293 177 aa15.96■□□□□ 0.15
PDLIM7-212ENST00000504380 SAP30BPQ9UHR5 308 aaKnown RBP15.96■□□□□ 0.15
PDLIM7-212ENST00000504380 CDK5RAP2Q96SN8 1893 aa15.96■□□□□ 0.15
PDLIM7-212ENST00000504380 RFX7Q2KHR2 1363 aa15.96■□□□□ 0.15
PDLIM7-212ENST00000504380 PITPNM2Q9BZ72 1349 aa15.95■□□□□ 0.14
PDLIM7-212ENST00000504380 PLCG2P16885 1265 aa15.95■□□□□ 0.14
PDLIM7-212ENST00000504380 USP5P45974 858 aa15.95■□□□□ 0.14
PDLIM7-212ENST00000504380 MCMDC2Q4G0Z9 681 aa15.95■□□□□ 0.14
PDLIM7-212ENST00000504380 TMED8Q6PL24 325 aaPredicted RBP15.95■□□□□ 0.14
PDLIM7-212ENST00000504380 ZNF589Q86UQ0 364 aaPredicted RBP15.95■□□□□ 0.14
PDLIM7-212ENST00000504380 IDI2Q9BXS1 227 aa15.95■□□□□ 0.14
PDLIM7-212ENST00000504380 CRNKL1Q9BZJ0 848 aaKnown RBP15.95■□□□□ 0.14
PDLIM7-212ENST00000504380 HELLSQ9NRZ9 838 aa15.95■□□□□ 0.14
PDLIM7-212ENST00000504380 SLC4A4Q9Y6R1 1079 aa15.95■□□□□ 0.14
PDLIM7-212ENST00000504380 ITGBL1O95965 494 aaPredicted RBP15.94■□□□□ 0.14
PDLIM7-212ENST00000504380 SLURP2P0DP57 97 aa15.94■□□□□ 0.14
PDLIM7-212ENST00000504380 VPS53Q5VIR6 699 aa15.94■□□□□ 0.14
PDLIM7-212ENST00000504380 SH3BP5LQ7L8J4 393 aa15.94■□□□□ 0.14
PDLIM7-212ENST00000504380 CDCA5Q96FF9 252 aa15.94■□□□□ 0.14
PDLIM7-212ENST00000504380 ZNF408Q9H9D4 720 aa15.94■□□□□ 0.14
PDLIM7-212ENST00000504380 FLT1P17948 1338 aa15.94■□□□□ 0.14
PDLIM7-212ENST00000504380 DDTLA6NHG4 134 aaPredicted RBP15.93■□□□□ 0.14
PDLIM7-212ENST00000504380 HIP1O00291 1037 aa15.93■□□□□ 0.14
PDLIM7-212ENST00000504380 TNNI2P48788 182 aa15.93■□□□□ 0.14
PDLIM7-212ENST00000504380 EVX2Q03828 476 aa15.93■□□□□ 0.14
PDLIM7-212ENST00000504380 NBPF12Q5TAG4 269 aaPredicted RBP15.93■□□□□ 0.14
PDLIM7-212ENST00000504380 ZSCAN29Q8IWY8 852 aaPredicted RBP15.93■□□□□ 0.14
PDLIM7-212ENST00000504380 FAM151AQ8WW52 585 aa15.93■□□□□ 0.14
PDLIM7-212ENST00000504380 TEPSINQ96N21 525 aa15.93■□□□□ 0.14
PDLIM7-212ENST00000504380 FZD1Q9UP38 647 aa15.93■□□□□ 0.14
PDLIM7-212ENST00000504380 GSG1L2A8MUP6 293 aa15.92■□□□□ 0.14
PDLIM7-212ENST00000504380 ENTPD3O75355 529 aa15.92■□□□□ 0.14
PDLIM7-212ENST00000504380 CYP2D6P10635 497 aa15.92■□□□□ 0.14
PDLIM7-212ENST00000504380 TNFAIP1Q13829 316 aa15.92■□□□□ 0.14
PDLIM7-212ENST00000504380 PRKG1Q13976 671 aa15.92■□□□□ 0.14
PDLIM7-212ENST00000504380 FKBP1CQ5VVH2 108 aa15.92■□□□□ 0.14
PDLIM7-212ENST00000504380 FAM83AQ86UY5 434 aa15.92■□□□□ 0.14
PDLIM7-212ENST00000504380 OSBPL5Q9H0X9 879 aaPredicted RBP15.92■□□□□ 0.14
PDLIM7-212ENST00000504380 PALD1Q9ULE6 856 aa15.92■□□□□ 0.14
PDLIM7-212ENST00000504380 FOCADQ5VW36 1801 aa15.91■□□□□ 0.14
PDLIM7-212ENST00000504380 CYP2D7A0A087X1C5 515 aa15.91■□□□□ 0.14
PDLIM7-212ENST00000504380 SMIM22K7EJ46 135 aa15.91■□□□□ 0.14
PDLIM7-212ENST00000504380 FOXP2O15409 715 aa15.91■□□□□ 0.14
PDLIM7-212ENST00000504380 CDC45O75419 566 aa15.91■□□□□ 0.14
PDLIM7-212ENST00000504380 APPP05067 770 aa15.91■□□□□ 0.14
PDLIM7-212ENST00000504380 EPB41L4AQ9HCS5 686 aaPredicted RBP15.91■□□□□ 0.14
PDLIM7-212ENST00000504380 DCP1AQ9NPI6 582 aaPredicted RBP15.91■□□□□ 0.14
PDLIM7-212ENST00000504380 CCDC171Q6TFL3 1326 aa15.91■□□□□ 0.14
PDLIM7-212ENST00000504380 BAZ2AQ9UIF9 1905 aaKnown RBP15.9■□□□□ 0.14
PDLIM7-212ENST00000504380 MOB2Q70IA6 237 aa15.9■□□□□ 0.14
PDLIM7-212ENST00000504380 TICAM2Q86XR7 235 aa15.9■□□□□ 0.14
PDLIM7-212ENST00000504380 CERS3Q8IU89 383 aa15.9■□□□□ 0.14
PDLIM7-212ENST00000504380 MCM9Q9NXL9 1143 aa15.9■□□□□ 0.14
PDLIM7-212ENST00000504380 MKRN1Q9UHC7 482 aaKnown RBP15.9■□□□□ 0.14
PDLIM7-212ENST00000504380 NAV1Q8NEY1 1877 aa15.9■□□□□ 0.14
PDLIM7-212ENST00000504380 MYH1P12882 1939 aa15.9■□□□□ 0.14
PDLIM7-212ENST00000504380 SSC5DA1L4H1 1573 aa15.89■□□□□ 0.13
PDLIM7-212ENST00000504380 FAM196BA6NMK8 535 aa15.89■□□□□ 0.13
PDLIM7-212ENST00000504380 PATL2C9JE40 543 aaKnown RBP15.89■□□□□ 0.13
PDLIM7-212ENST00000504380 CELF2O95319 508 aaKnown RBP15.89■□□□□ 0.13
PDLIM7-212ENST00000504380 CST9Q5W186 159 aa15.89■□□□□ 0.13
PDLIM7-212ENST00000504380 MIGA2Q7L4E1 593 aa15.89■□□□□ 0.13
PDLIM7-212ENST00000504380 IFNL3Q8IZI9 196 aa15.89■□□□□ 0.13
PDLIM7-212ENST00000504380 STK11IPQ8N1F8 1099 aa15.89■□□□□ 0.13
PDLIM7-212ENST00000504380 RUFY2Q8WXA3 655 aa15.89■□□□□ 0.13
PDLIM7-212ENST00000504380 ESYT1Q9BSJ8 1104 aa15.89■□□□□ 0.13
PDLIM7-212ENST00000504380 PCDH10Q9P2E7 1040 aa15.89■□□□□ 0.13
PDLIM7-212ENST00000504380 PPP2R3BQ9Y5P8 575 aa15.89■□□□□ 0.13
PDLIM7-212ENST00000504380 PASKQ96RG2 1323 aa15.89■□□□□ 0.13
PDLIM7-212ENST00000504380 USP17L12C9JPN9 530 aa15.88■□□□□ 0.13
PDLIM7-212ENST00000504380 USP17L21D6R901 530 aa15.88■□□□□ 0.13
PDLIM7-212ENST00000504380 SGSM2O43147 1006 aa15.88■□□□□ 0.13
PDLIM7-212ENST00000504380 NPM3O75607 178 aaKnown RBP15.88■□□□□ 0.13
PDLIM7-212ENST00000504380 POLR3DP05423 398 aaPredicted RBP15.88■□□□□ 0.13
PDLIM7-212ENST00000504380 HSPD1P10809 573 aaKnown RBP15.88■□□□□ 0.13
PDLIM7-212ENST00000504380 GNAT2P19087 354 aa15.88■□□□□ 0.13
PDLIM7-212ENST00000504380 PLCD1P51178 756 aa15.88■□□□□ 0.13
PDLIM7-212ENST00000504380 PTH1RQ03431 593 aa15.88■□□□□ 0.13
PDLIM7-212ENST00000504380 CTR9Q6PD62 1173 aa15.88■□□□□ 0.13
PDLIM7-212ENST00000504380 CSRNP1Q96S65 589 aa15.88■□□□□ 0.13
PDLIM7-212ENST00000504380 ATP8A2Q9NTI2 1148 aa15.88■□□□□ 0.13
PDLIM7-212ENST00000504380 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.88■□□□□ 0.13
PDLIM7-212ENST00000504380 TDO2P48775 406 aa15.87■□□□□ 0.13
PDLIM7-212ENST00000504380 DDX60LQ5H9U9 1706 aaKnown RBP15.86■□□□□ 0.13
PDLIM7-212ENST00000504380 MINDY4BA8MYZ0 360 aa15.86■□□□□ 0.13
PDLIM7-212ENST00000504380 MFAP1P55081 439 aaKnown RBP15.86■□□□□ 0.13
PDLIM7-212ENST00000504380 TTLL12Q14166 644 aaPredicted RBP15.86■□□□□ 0.13
PDLIM7-212ENST00000504380 SUPT20HL1Q3ZLR7 823 aa15.86■□□□□ 0.13
PDLIM7-212ENST00000504380 DYNLL2Q96FJ2 89 aa15.86■□□□□ 0.13
PDLIM7-212ENST00000504380 DDRGK1Q96HY6 314 aa15.86■□□□□ 0.13
PDLIM7-212ENST00000504380 NAPBQ9H115 298 aa15.86■□□□□ 0.13
PDLIM7-212ENST00000504380 PRDM10Q9NQV6 1147 aa15.86■□□□□ 0.13
PDLIM7-212ENST00000504380 SIPA1L1O43166 1804 aa15.86■□□□□ 0.13
PDLIM7-212ENST00000504380 RAD50Q92878 1312 aa15.86■□□□□ 0.13
PDLIM7-212ENST00000504380 TRPM7Q96QT4 1865 aa15.86■□□□□ 0.13
PDLIM7-212ENST00000504380 ATRNL1Q5VV63 1379 aa15.86■□□□□ 0.13
PDLIM7-212ENST00000504380 RPAP1Q9BWH6 1393 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms