RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 USHBP1Q8N6Y0 703 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 LILRB1Q8NHL6 650 aaPredicted RBP4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 C17orf50Q8WW18 174 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 RABGGTAQ92696 567 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 C16orf45Q96MC5 204 aaPredicted RBP4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 C8orf37Q96NL8 207 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 BRD8Q9H0E9 1235 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 GOPCQ9HD26 462 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 RABL2BQ9UNT1 228 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 FRMD4BQ9Y2L6 1034 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 SPATA31A3Q5VYP0 1347 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 PEX19P40855 299 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 ABL2P42684 1182 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 DNA2P51530 1060 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 IQCB1Q15051 598 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 SLC27A3Q5K4L6 730 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 LDLRAD1Q5T700 205 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 OLFM4Q6UX06 510 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 SMYD1Q8NB12 490 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 TESK2Q96S53 571 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 TSGA10Q9BZW7 698 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 B3GNT4Q9C0J1 378 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 ZSWIM4Q9H7M6 989 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 LRRFIP2Q9Y608 721 aaKnown RBP4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 U3KPZ7 1027 aaPredicted RBP4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 NPHP3Q7Z494 1330 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 ARHGEF10O15013 1369 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 SHANK3Q9BYB0 1731 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 ANKRD65E5RJM6 399 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 PDLIM1O00151 329 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 LRRC37A3O60309 1634 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 TPPPO94811 219 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 PNMA6AP0CW24 399 aaPredicted RBP4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 CCDC192P0DO97 292 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 BLMP54132 1417 aaPredicted RBP4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 MVPQ14764 893 aaKnown RBP4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 TTC31Q49AM3 519 aaPredicted RBP4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 SBF2Q86WG5 1849 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 CCDC83Q8IWF9 413 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 TRIM42Q8IWZ5 723 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 LILRB2Q8N423 598 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 MAB21L3Q8N8X9 362 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 ARHGAP45Q92619 1136 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 C1orf74Q96LT6 269 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 JAKMIP1Q96N16 626 aaKnown RBP4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 PAIP2Q9BPZ3 127 aaKnown RBP4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 TANGO6Q9C0B7 1094 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 KLF15Q9UIH9 416 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 F6X3S4 739 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 H3BQF6 201 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 HDAC4P56524 1084 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 MKRN4PQ13434 485 aaPredicted RBP4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 CRYMQ14894 314 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 TOM1L2Q6ZVM7 507 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 CNTROBQ8N137 903 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 CCDC102AQ96A19 550 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 LRRC59Q96AG4 307 aaKnown RBP4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 SH3GL3Q99963 347 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 RBM42Q9BTD8 480 aaKnown RBP4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 NACA2Q9H009 215 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 TTC12Q9H892 705 aaPredicted RBP4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 EMILIN1Q9Y6C2 1016 aa4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 V9GYY5 206 aaPredicted RBP4.2□□□□□ -1.74
PCDH11X-208ENST00000504220 RGS12O14924 1447 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 ERICH2A1L162 156 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 M0R2C6 588 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 FOXD2O60548 495 aaPredicted RBP4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 TBC1D8O95759 1140 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 NBPF7P0C2Y1 421 aaPredicted RBP4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 MYL6BP14649 208 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 PHEXP78562 749 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 BTBD6Q96KE9 485 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 TACO1Q9BSH4 297 aaKnown RBP4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 FUCA2Q9BTY2 467 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 ZHX3Q9H4I2 956 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 PLEKHG3A1L390 1219 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 BIN1O00499 593 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 IKBKBO14920 756 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 SRGAP3O43295 1099 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 DDX58O95786 925 aaKnown RBP4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 ZNF132P52740 706 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 KRT85P78386 507 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 MECOMQ03112 1051 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 HSP90AA4PQ58FG1 418 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 THEMIS2Q5TEJ8 643 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 KLHL10Q6JEL2 608 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 TAX1BP1Q86VP1 789 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 FNBP4Q8N3X1 1017 aaPredicted RBP4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 GOLGA5Q8TBA6 731 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 SSH1Q8WYL5 1049 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 AK7Q96M32 723 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 TCEANC2Q96MN5 208 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 NAT10Q9H0A0 1025 aaKnown RBP4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 UTP6Q9NYH9 597 aaKnown RBP4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 TUBGCP4Q9UGJ1 667 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 USP6P35125 1406 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 CPDO75976 1380 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 RAB11FIP3O75154 756 aa4.19□□□□□ -1.74
PCDH11X-208ENST00000504220 RNF8O76064 485 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms