RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 ZSWIM8A7E2V4 1837 aa14.7□□□□□ -0.06
MED28-203ENST00000503945 AK9Q5TCS8 1911 aa14.69□□□□□ -0.06
MED28-203ENST00000503945 BTBD19C9JJ37 291 aa14.69□□□□□ -0.06
MED28-203ENST00000503945 RLBP1P12271 317 aa14.69□□□□□ -0.06
MED28-203ENST00000503945 PPATQ06203 517 aa14.69□□□□□ -0.06
MED28-203ENST00000503945 TTC39AQ5SRH9 613 aa14.69□□□□□ -0.06
MED28-203ENST00000503945 TBC1D9Q6ZT07 1266 aa14.69□□□□□ -0.06
MED28-203ENST00000503945 ZFPM1Q8IX07 1006 aa14.69□□□□□ -0.06
MED28-203ENST00000503945 ARHGAP39Q9C0H5 1083 aa14.69□□□□□ -0.06
MED28-203ENST00000503945 C1orf115Q9H7X2 142 aa14.69□□□□□ -0.06
MED28-203ENST00000503945 ZNF112Q9UJU3 913 aa14.69□□□□□ -0.06
MED28-203ENST00000503945 GPR75-ASB3A0A0A6YYF3 556 aa14.68□□□□□ -0.06
MED28-203ENST00000503945 IRF6O14896 467 aa14.68□□□□□ -0.06
MED28-203ENST00000503945 TLR2O60603 784 aa14.68□□□□□ -0.06
MED28-203ENST00000503945 MAP4K4O95819 1239 aaPredicted RBP14.68□□□□□ -0.06
MED28-203ENST00000503945 ARID4AP29374 1257 aaPredicted RBP14.68□□□□□ -0.06
MED28-203ENST00000503945 BTDP43251 543 aa14.68□□□□□ -0.06
MED28-203ENST00000503945 RGS3P49796 1198 aa14.68□□□□□ -0.06
MED28-203ENST00000503945 SLC9C1Q4G0N8 1177 aa14.68□□□□□ -0.06
MED28-203ENST00000503945 TNNI3KQ59H18 835 aa14.68□□□□□ -0.06
MED28-203ENST00000503945 NBPF11Q86T75 865 aa14.68□□□□□ -0.06
MED28-203ENST00000503945 NOP58Q9Y2X3 529 aaKnown RBP14.68□□□□□ -0.06
MED28-203ENST00000503945 FPGT-TNNI3KV9GXZ4 949 aa14.68□□□□□ -0.06
MED28-203ENST00000503945 GAKO14976 1311 aa14.67□□□□□ -0.06
MED28-203ENST00000503945 MYCP01106 439 aaPredicted RBP14.67□□□□□ -0.06
MED28-203ENST00000503945 INPP5BP32019 993 aa14.67□□□□□ -0.06
MED28-203ENST00000503945 PPIL2Q13356 520 aa14.67□□□□□ -0.06
MED28-203ENST00000503945 SLC4A8Q2Y0W8 1093 aa14.67□□□□□ -0.06
MED28-203ENST00000503945 PANK1Q8TE04 598 aa14.67□□□□□ -0.06
MED28-203ENST00000503945 NOL10Q9BSC4 688 aaKnown RBP14.67□□□□□ -0.06
MED28-203ENST00000503945 RPAP1Q9BWH6 1393 aaPredicted RBP14.66□□□□□ -0.06
MED28-203ENST00000503945 MCAMP43121 646 aa14.66□□□□□ -0.06
MED28-203ENST00000503945 PICALMQ13492 652 aa14.66□□□□□ -0.06
MED28-203ENST00000503945 PI16Q6UXB8 463 aa14.66□□□□□ -0.06
MED28-203ENST00000503945 SH3TC2Q8TF17 1288 aa14.66□□□□□ -0.06
MED28-203ENST00000503945 NSUN4Q96CB9 384 aaKnown RBP14.66□□□□□ -0.06
MED28-203ENST00000503945 CHMP4BQ9H444 224 aaKnown RBP14.66□□□□□ -0.06
MED28-203ENST00000503945 ZCCHC17Q9NP64 241 aaKnown RBP14.66□□□□□ -0.06
MED28-203ENST00000503945 MYH13Q9UKX3 1938 aa14.66□□□□□ -0.06
MED28-203ENST00000503945 MROH7-TTC4A0A0A0MT08 1334 aa14.66□□□□□ -0.06
MED28-203ENST00000503945 NPM3O75607 178 aaKnown RBP14.65□□□□□ -0.06
MED28-203ENST00000503945 ECM2O94769 699 aaPredicted RBP14.65□□□□□ -0.06
MED28-203ENST00000503945 BAG3O95817 575 aa14.65□□□□□ -0.06
MED28-203ENST00000503945 LACTBP83111 547 aaPredicted RBP14.65□□□□□ -0.06
MED28-203ENST00000503945 KIF22Q14807 665 aa14.65□□□□□ -0.06
MED28-203ENST00000503945 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.65□□□□□ -0.06
MED28-203ENST00000503945 DBNDD2Q9BQY9 259 aa14.65□□□□□ -0.06
MED28-203ENST00000503945 PICK1Q9NRD5 415 aa14.65□□□□□ -0.06
MED28-203ENST00000503945 SNRKQ9NRH2 765 aa14.65□□□□□ -0.06
MED28-203ENST00000503945 BRCA2P51587 3418 aa14.65□□□□□ -0.06
MED28-203ENST00000503945 DDTLA6NHG4 134 aaPredicted RBP14.64□□□□□ -0.07
MED28-203ENST00000503945 PHF20L1A8MW92 1017 aa14.64□□□□□ -0.07
MED28-203ENST00000503945 CXCL11O14625 94 aa14.64□□□□□ -0.07
MED28-203ENST00000503945 CTNND1O60716 968 aaKnown RBP14.64□□□□□ -0.07
MED28-203ENST00000503945 IGSF3O75054 1194 aa14.64□□□□□ -0.07
MED28-203ENST00000503945 CTGFP29279 349 aa14.64□□□□□ -0.07
MED28-203ENST00000503945 MAP3K10Q02779 954 aa14.64□□□□□ -0.07
MED28-203ENST00000503945 HSP90AB4PQ58FF6 505 aa14.64□□□□□ -0.07
MED28-203ENST00000503945 NAA16Q6N069 864 aaPredicted RBP14.64□□□□□ -0.07
MED28-203ENST00000503945 C17orf99Q6UX52 265 aa14.64□□□□□ -0.07
MED28-203ENST00000503945 ERC1Q8IUD2 1116 aa14.64□□□□□ -0.07
MED28-203ENST00000503945 ZNF512BQ96KM6 892 aaPredicted RBP14.64□□□□□ -0.07
MED28-203ENST00000503945 CCDC8Q9H0W5 538 aaPredicted RBP14.64□□□□□ -0.07
MED28-203ENST00000503945 ZHX2Q9Y6X8 837 aa14.64□□□□□ -0.07
MED28-203ENST00000503945 PLCG2P16885 1265 aa14.63□□□□□ -0.07
MED28-203ENST00000503945 RHBDL3P58872 404 aa14.63□□□□□ -0.07
MED28-203ENST00000503945 NOL9Q5SY16 702 aaKnown RBP14.63□□□□□ -0.07
MED28-203ENST00000503945 CEP85Q6P2H3 762 aa14.63□□□□□ -0.07
MED28-203ENST00000503945 SH3BP5LQ7L8J4 393 aa14.63□□□□□ -0.07
MED28-203ENST00000503945 RPAP2Q8IXW5 612 aaPredicted RBP14.63□□□□□ -0.07
MED28-203ENST00000503945 CPA4Q9UI42 421 aa14.63□□□□□ -0.07
MED28-203ENST00000503945 TBC1D12O60347 775 aa14.62□□□□□ -0.07
MED28-203ENST00000503945 GNRH1P01148 92 aa14.62□□□□□ -0.07
MED28-203ENST00000503945 CYP2E1P05181 493 aaPredicted RBP14.62□□□□□ -0.07
MED28-203ENST00000503945 FASTKD5Q7L8L6 764 aaKnown RBP14.62□□□□□ -0.07
MED28-203ENST00000503945 ANKRD23Q86SG2 305 aa14.62□□□□□ -0.07
MED28-203ENST00000503945 SCYL3Q8IZE3 742 aa14.62□□□□□ -0.07
MED28-203ENST00000503945 ZNF384Q8TF68 577 aa14.62□□□□□ -0.07
MED28-203ENST00000503945 EAF2Q96CJ1 260 aaPredicted RBP14.62□□□□□ -0.07
MED28-203ENST00000503945 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.62□□□□□ -0.07
MED28-203ENST00000503945 DDX4Q9NQI0 724 aaKnown RBP14.62□□□□□ -0.07
MED28-203ENST00000503945 RCAN3Q9UKA8 241 aa14.62□□□□□ -0.07
MED28-203ENST00000503945 DDX19BQ9UMR2 479 aa14.62□□□□□ -0.07
MED28-203ENST00000503945 KCNH4Q9UQ05 1017 aa14.62□□□□□ -0.07
MED28-203ENST00000503945 COLQQ9Y215 455 aaPredicted RBP14.62□□□□□ -0.07
MED28-203ENST00000503945 PDHXO00330 501 aa14.61□□□□□ -0.07
MED28-203ENST00000503945 HMMRO75330 724 aa14.61□□□□□ -0.07
MED28-203ENST00000503945 PTPRAP18433 802 aa14.61□□□□□ -0.07
MED28-203ENST00000503945 PSMC4P43686 418 aa14.61□□□□□ -0.07
MED28-203ENST00000503945 FXR1P51114 621 aaKnown RBP eCLIP14.61□□□□□ -0.07
MED28-203ENST00000503945 PRMT2P55345 433 aa14.61□□□□□ -0.07
MED28-203ENST00000503945 PPP4CP60510 307 aa14.61□□□□□ -0.07
MED28-203ENST00000503945 MOGSQ13724 837 aa14.61□□□□□ -0.07
MED28-203ENST00000503945 MTFR1Q15390 333 aa14.61□□□□□ -0.07
MED28-203ENST00000503945 TEX11Q8IYF3 940 aa14.61□□□□□ -0.07
MED28-203ENST00000503945 DBNLQ9UJU6 430 aaKnown RBP14.61□□□□□ -0.07
MED28-203ENST00000503945 COG6Q9Y2V7 657 aa14.61□□□□□ -0.07
MED28-203ENST00000503945 ZAP70P43403 619 aa14.6□□□□□ -0.07
MED28-203ENST00000503945 TRIM47Q96LD4 638 aa14.6□□□□□ -0.07
MED28-203ENST00000503945 DHX36Q9H2U1 1008 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms