RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 HP1BP3Q5SSJ5 553 aaPredicted RBP12.46□□□□□ -0.41
EXOSC9-203ENST00000503139 WDR18Q9BV38 432 aa12.46□□□□□ -0.41
EXOSC9-203ENST00000503139 ZNRF3Q9ULT6 936 aa12.46□□□□□ -0.41
EXOSC9-203ENST00000503139 MRVI1Q9Y6F6 885 aa12.46□□□□□ -0.41
EXOSC9-203ENST00000503139 SNCAIPQ9Y6H5 919 aa12.46□□□□□ -0.41
EXOSC9-203ENST00000503139 SYNGAP1Q96PV0 1343 aa12.45□□□□□ -0.42
EXOSC9-203ENST00000503139 PRR36Q9H6K5 1346 aa12.45□□□□□ -0.42
EXOSC9-203ENST00000503139 ATE1O95260 518 aa12.45□□□□□ -0.42
EXOSC9-203ENST00000503139 CPLX3Q8WVH0 158 aa12.45□□□□□ -0.42
EXOSC9-203ENST00000503139 PLVAPQ9BX97 442 aa12.45□□□□□ -0.42
EXOSC9-203ENST00000503139 GNB5O14775 395 aa12.44□□□□□ -0.42
EXOSC9-203ENST00000503139 AOC2O75106 756 aa12.44□□□□□ -0.42
EXOSC9-203ENST00000503139 WISP1O95388 367 aa12.44□□□□□ -0.42
EXOSC9-203ENST00000503139 HNRNPUQ00839 825 aaKnown RBP eCLIP12.44□□□□□ -0.42
EXOSC9-203ENST00000503139 ZC3H12AQ5D1E8 599 aaKnown RBP12.44□□□□□ -0.42
EXOSC9-203ENST00000503139 GK5Q6ZS86 529 aa12.44□□□□□ -0.42
EXOSC9-203ENST00000503139 FERD3LQ96RJ6 166 aa12.44□□□□□ -0.42
EXOSC9-203ENST00000503139 PCDHB14Q9Y5E9 798 aa12.44□□□□□ -0.42
EXOSC9-203ENST00000503139 SHROOM4Q9ULL8 1493 aa12.43□□□□□ -0.42
EXOSC9-203ENST00000503139 WIPF1O43516 503 aa12.43□□□□□ -0.42
EXOSC9-203ENST00000503139 GRIN3BO60391 1043 aa12.43□□□□□ -0.42
EXOSC9-203ENST00000503139 LORP23490 312 aaPredicted RBP12.43□□□□□ -0.42
EXOSC9-203ENST00000503139 GIPRP48546 466 aa12.43□□□□□ -0.42
EXOSC9-203ENST00000503139 SOGA3Q5TF21 947 aa12.43□□□□□ -0.42
EXOSC9-203ENST00000503139 CYFIP1Q7L576 1253 aa12.43□□□□□ -0.42
EXOSC9-203ENST00000503139 TMPRSS13Q9BYE2 586 aa12.43□□□□□ -0.42
EXOSC9-203ENST00000503139 DUOXA2Q1HG44 320 aa12.42□□□□□ -0.42
EXOSC9-203ENST00000503139 HDXQ7Z353 690 aa12.42□□□□□ -0.42
EXOSC9-203ENST00000503139 PMFBP1Q8TBY8 1022 aa12.42□□□□□ -0.42
EXOSC9-203ENST00000503139 ANAPC16Q96DE5 110 aa12.42□□□□□ -0.42
EXOSC9-203ENST00000503139 TACC3Q9Y6A5 838 aa12.42□□□□□ -0.42
EXOSC9-203ENST00000503139 IMPDH2P12268 514 aa12.41□□□□□ -0.42
EXOSC9-203ENST00000503139 EIF6P56537 245 aaKnown RBP12.41□□□□□ -0.42
EXOSC9-203ENST00000503139 RING1Q06587 406 aa12.41□□□□□ -0.42
EXOSC9-203ENST00000503139 EXOSC6Q5RKV6 272 aaKnown RBP12.41□□□□□ -0.42
EXOSC9-203ENST00000503139 NBPF6Q5VWK0 638 aa12.41□□□□□ -0.42
EXOSC9-203ENST00000503139 KIAA1211Q6ZU35 1233 aa12.41□□□□□ -0.42
EXOSC9-203ENST00000503139 CKAP2LQ8IYA6 745 aa12.41□□□□□ -0.42
EXOSC9-203ENST00000503139 FAM169BQ8N8A8 192 aa12.41□□□□□ -0.42
EXOSC9-203ENST00000503139 RBBP8NLQ8NC74 664 aaPredicted RBP12.41□□□□□ -0.42
EXOSC9-203ENST00000503139 NBPF4Q96M43 638 aa12.41□□□□□ -0.42
EXOSC9-203ENST00000503139 PRKAG3Q9UGI9 489 aa12.41□□□□□ -0.42
EXOSC9-203ENST00000503139 MKL2Q9ULH7 1088 aa12.41□□□□□ -0.42
EXOSC9-203ENST00000503139 DCDC2CA8MYV0 355 aa12.4□□□□□ -0.42
EXOSC9-203ENST00000503139 FAM229AH3BQW9 127 aa12.4□□□□□ -0.42
EXOSC9-203ENST00000503139 ELMO3Q96BJ8 720 aa12.4□□□□□ -0.42
EXOSC9-203ENST00000503139 CORINQ9Y5Q5 1042 aa12.4□□□□□ -0.42
EXOSC9-203ENST00000503139 MEGF11A6BM72 1044 aa12.39□□□□□ -0.43
EXOSC9-203ENST00000503139 SPDYE3A6NKU9 549 aa12.39□□□□□ -0.43
EXOSC9-203ENST00000503139 KLF4O43474 513 aa12.39□□□□□ -0.43
EXOSC9-203ENST00000503139 CCDC144BQ3MJ40 725 aa12.39□□□□□ -0.43
EXOSC9-203ENST00000503139 ANKS3Q6ZW76 656 aa12.39□□□□□ -0.43
EXOSC9-203ENST00000503139 HTR3BO95264 441 aa12.38□□□□□ -0.43
EXOSC9-203ENST00000503139 SLFN14P0C7P3 912 aa12.38□□□□□ -0.43
EXOSC9-203ENST00000503139 ELNP15502 786 aa12.38□□□□□ -0.43
EXOSC9-203ENST00000503139 ERVK-24P63145 666 aa12.38□□□□□ -0.43
EXOSC9-203ENST00000503139 SERINC3Q13530 473 aa12.38□□□□□ -0.43
EXOSC9-203ENST00000503139 FBXW10Q5XX13 1052 aa12.38□□□□□ -0.43
EXOSC9-203ENST00000503139 IGF2-ASQ6U949 168 aa12.38□□□□□ -0.43
EXOSC9-203ENST00000503139 LSRQ86X29 649 aaPredicted RBP12.38□□□□□ -0.43
EXOSC9-203ENST00000503139 OR6P1Q8NGX9 317 aa12.38□□□□□ -0.43
EXOSC9-203ENST00000503139 RUSC1Q9BVN2 902 aa12.38□□□□□ -0.43
EXOSC9-203ENST00000503139 PPP1R9AQ9ULJ8 1098 aa12.38□□□□□ -0.43
EXOSC9-203ENST00000503139 PIK3R2O00459 728 aa12.37□□□□□ -0.43
EXOSC9-203ENST00000503139 SMAD7O15105 426 aaKnown RBP12.37□□□□□ -0.43
EXOSC9-203ENST00000503139 TMPRSS2O15393 492 aa12.37□□□□□ -0.43
EXOSC9-203ENST00000503139 ID3Q02535 119 aa12.37□□□□□ -0.43
EXOSC9-203ENST00000503139 TRIM28Q13263 835 aaKnown RBP12.37□□□□□ -0.43
EXOSC9-203ENST00000503139 ACAD11Q709F0 780 aa12.37□□□□□ -0.43
EXOSC9-203ENST00000503139 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.37□□□□□ -0.43
EXOSC9-203ENST00000503139 C12orf40Q86WS4 652 aa12.37□□□□□ -0.43
EXOSC9-203ENST00000503139 OSBPL2Q9H1P3 480 aa12.37□□□□□ -0.43
EXOSC9-203ENST00000503139 SUGCTQ9HAC7 445 aa12.37□□□□□ -0.43
EXOSC9-203ENST00000503139 HIF3AQ9Y2N7 669 aa12.37□□□□□ -0.43
EXOSC9-203ENST00000503139 CSADQ9Y600 493 aa12.37□□□□□ -0.43
EXOSC9-203ENST00000503139 MEIS3P2A8K0S8 358 aa12.36□□□□□ -0.43
EXOSC9-203ENST00000503139 HNRNPLLQ8WVV9 542 aaKnown RBP12.36□□□□□ -0.43
EXOSC9-203ENST00000503139 CRBNQ96SW2 442 aa12.36□□□□□ -0.43
EXOSC9-203ENST00000503139 MRPL18Q9H0U6 180 aaKnown RBP12.36□□□□□ -0.43
EXOSC9-203ENST00000503139 RNF208Q9H0X6 261 aa12.36□□□□□ -0.43
EXOSC9-203ENST00000503139 RAD18Q9NS91 495 aa12.36□□□□□ -0.43
EXOSC9-203ENST00000503139 CRIM1Q9NZV1 1036 aa12.36□□□□□ -0.43
EXOSC9-203ENST00000503139 TNNI3KQ59H18 835 aa12.35□□□□□ -0.43
EXOSC9-203ENST00000503139 SMG8Q8ND04 991 aaKnown RBP12.35□□□□□ -0.43
EXOSC9-203ENST00000503139 ANTXR1Q9H6X2 564 aa12.35□□□□□ -0.43
EXOSC9-203ENST00000503139 REV1Q9UBZ9 1251 aa12.35□□□□□ -0.43
EXOSC9-203ENST00000503139 PRAMEF27A3QJZ7 478 aa12.34□□□□□ -0.43
EXOSC9-203ENST00000503139 NTF4P34130 210 aa12.34□□□□□ -0.43
EXOSC9-203ENST00000503139 RAB33AQ14088 237 aa12.34□□□□□ -0.43
EXOSC9-203ENST00000503139 AKAP4Q5JQC9 854 aa12.34□□□□□ -0.43
EXOSC9-203ENST00000503139 TMEM201Q5SNT2 666 aa12.34□□□□□ -0.43
EXOSC9-203ENST00000503139 WNT10AQ9GZT5 417 aa12.34□□□□□ -0.43
EXOSC9-203ENST00000503139 NOP53Q9NZM5 478 aaKnown RBP12.34□□□□□ -0.43
EXOSC9-203ENST00000503139 ADH5P11766 374 aa12.33□□□□□ -0.44
EXOSC9-203ENST00000503139 GRK4P32298 578 aa12.33□□□□□ -0.44
EXOSC9-203ENST00000503139 PDE4BQ07343 736 aa12.33□□□□□ -0.44
EXOSC9-203ENST00000503139 PPM1JQ5JR12 505 aa12.33□□□□□ -0.44
EXOSC9-203ENST00000503139 PIF1Q9H611 641 aa12.33□□□□□ -0.44
EXOSC9-203ENST00000503139 DISC1Q9NRI5 854 aa12.33□□□□□ -0.44
EXOSC9-203ENST00000503139 DNAJA2O60884 412 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms