RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 LRRFIP1Q32MZ4 808 aaKnown RBP30.32■■■□□ 2.44
LSM6-202ENST00000502781 MOB2Q70IA6 237 aa30.32■■■□□ 2.44
LSM6-202ENST00000502781 FSD1Q9BTV5 496 aa30.32■■■□□ 2.44
LSM6-202ENST00000502781 MYH7P12883 1935 aa30.32■■■□□ 2.44
LSM6-202ENST00000502781 PPP1R12BO60237 982 aaPredicted RBP30.31■■■□□ 2.44
LSM6-202ENST00000502781 TGFBRAP1Q8WUH2 860 aa30.31■■■□□ 2.44
LSM6-202ENST00000502781 PUS7LQ9H0K6 701 aaKnown RBP30.31■■■□□ 2.44
LSM6-202ENST00000502781 DDTLA6NHG4 134 aaPredicted RBP30.3■■■□□ 2.44
LSM6-202ENST00000502781 USP2O75604 605 aaPredicted RBP30.3■■■□□ 2.44
LSM6-202ENST00000502781 LDLRAD1Q5T700 205 aa30.3■■■□□ 2.44
LSM6-202ENST00000502781 LCORLQ8N3X6 602 aa30.3■■■□□ 2.44
LSM6-202ENST00000502781 APPBP2Q92624 585 aa30.3■■■□□ 2.44
LSM6-202ENST00000502781 HOOK2Q96ED9 719 aa30.3■■■□□ 2.44
LSM6-202ENST00000502781 PPP4R2Q9NY27 417 aa30.3■■■□□ 2.44
LSM6-202ENST00000502781 FZD1Q9UP38 647 aa30.3■■■□□ 2.44
LSM6-202ENST00000502781 FLT1P17948 1338 aa30.3■■■□□ 2.44
LSM6-202ENST00000502781 DEFB115Q30KQ5 88 aa30.29■■■□□ 2.44
LSM6-202ENST00000502781 ARMC9Q7Z3E5 817 aa30.29■■■□□ 2.44
LSM6-202ENST00000502781 OSBP2Q969R2 916 aa30.29■■■□□ 2.44
LSM6-202ENST00000502781 MKRN1Q9UHC7 482 aaKnown RBP30.29■■■□□ 2.44
LSM6-202ENST00000502781 UBE2Q2LH0YL09 131 aa30.28■■■□□ 2.44
LSM6-202ENST00000502781 MBD4O95243 580 aa30.28■■■□□ 2.44
LSM6-202ENST00000502781 PRKG1Q13976 671 aa30.28■■■□□ 2.44
LSM6-202ENST00000502781 MAPKAPK5Q8IW41 473 aa30.28■■■□□ 2.44
LSM6-202ENST00000502781 ARMT1Q9H993 441 aa30.28■■■□□ 2.44
LSM6-202ENST00000502781 ANGEL1Q9UNK9 670 aaKnown RBP30.28■■■□□ 2.44
LSM6-202ENST00000502781 MAP3K10Q02779 954 aa30.28■■■□□ 2.44
LSM6-202ENST00000502781 TTLL12Q14166 644 aaPredicted RBP30.28■■■□□ 2.44
LSM6-202ENST00000502781 CSRNP1Q96S65 589 aa30.28■■■□□ 2.44
LSM6-202ENST00000502781 CRNKL1Q9BZJ0 848 aaKnown RBP30.28■■■□□ 2.44
LSM6-202ENST00000502781 UNCXA6NJT0 531 aa30.27■■■□□ 2.44
LSM6-202ENST00000502781 ZMYM1Q5SVZ6 1142 aa30.27■■■□□ 2.44
LSM6-202ENST00000502781 TTC22Q5TAA0 569 aa30.27■■■□□ 2.44
LSM6-202ENST00000502781 CDK5RAP2Q96SN8 1893 aa30.27■■■□□ 2.44
LSM6-202ENST00000502781 FOCADQ5VW36 1801 aa30.26■■■□□ 2.43
LSM6-202ENST00000502781 DCAF15Q66K64 600 aa30.26■■■□□ 2.43
LSM6-202ENST00000502781 ZSCAN29Q8IWY8 852 aaPredicted RBP30.26■■■□□ 2.43
LSM6-202ENST00000502781 AIDAQ96BJ3 306 aa30.26■■■□□ 2.43
LSM6-202ENST00000502781 KLRG1Q96E93 195 aa30.26■■■□□ 2.43
LSM6-202ENST00000502781 DHX36Q9H2U1 1008 aaKnown RBP30.26■■■□□ 2.43
LSM6-202ENST00000502781 TRIM6-TRIM34B2RNG4 842 aa30.25■■■□□ 2.43
LSM6-202ENST00000502781 GSPT1P15170 499 aaKnown RBP30.25■■■□□ 2.43
LSM6-202ENST00000502781 IREB2P48200 963 aaKnown RBP30.25■■■□□ 2.43
LSM6-202ENST00000502781 RGMBQ6NW40 437 aa30.25■■■□□ 2.43
LSM6-202ENST00000502781 USP5P45974 858 aa30.24■■■□□ 2.43
LSM6-202ENST00000502781 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.24■■■□□ 2.432e-6■■■□□ 15.6
LSM6-202ENST00000502781 STRBPQ96SI9 672 aaKnown RBP30.24■■■□□ 2.43
LSM6-202ENST00000502781 CEP350Q5VT06 3117 aa30.24■■■□□ 2.43
LSM6-202ENST00000502781 MIGA2Q7L4E1 593 aa30.23■■■□□ 2.43
LSM6-202ENST00000502781 RILPL2Q969X0 211 aa30.23■■■□□ 2.43
LSM6-202ENST00000502781 ZNF112Q9UJU3 913 aa30.23■■■□□ 2.43
LSM6-202ENST00000502781 PRKAB2O43741 272 aa30.22■■■□□ 2.43
LSM6-202ENST00000502781 TBC1D12O60347 775 aa30.22■■■□□ 2.43
LSM6-202ENST00000502781 VEGFBP49765 207 aa30.22■■■□□ 2.43
LSM6-202ENST00000502781 CYP4F22Q6NT55 531 aa30.22■■■□□ 2.43
LSM6-202ENST00000502781 SDR42E1Q8WUS8 393 aa30.22■■■□□ 2.43
LSM6-202ENST00000502781 ZNF341Q9BYN7 854 aa30.22■■■□□ 2.43
LSM6-202ENST00000502781 DCP1AQ9NPI6 582 aaPredicted RBP30.22■■■□□ 2.43
LSM6-202ENST00000502781 M0R2C6 588 aa30.21■■■□□ 2.43
LSM6-202ENST00000502781 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.21■■■□□ 2.43
LSM6-202ENST00000502781 METTL16Q86W50 562 aaKnown RBP30.21■■■□□ 2.43
LSM6-202ENST00000502781 CAPNS2Q96L46 248 aa30.21■■■□□ 2.43
LSM6-202ENST00000502781 SEC62Q99442 399 aaKnown RBP30.21■■■□□ 2.43
LSM6-202ENST00000502781 PI4KBQ9UBF8 816 aa30.21■■■□□ 2.43
LSM6-202ENST00000502781 PALD1Q9ULE6 856 aa30.21■■■□□ 2.43
LSM6-202ENST00000502781 GPAA1O43292 621 aa30.2■■■□□ 2.43
LSM6-202ENST00000502781 ANKRD13AQ8IZ07 590 aa30.2■■■□□ 2.43
LSM6-202ENST00000502781 ATP8A2Q9NTI2 1148 aa30.2■■■□□ 2.43
LSM6-202ENST00000502781 FAM155AB1AL88 458 aaPredicted RBP30.19■■■□□ 2.42
LSM6-202ENST00000502781 ECE1P42892 770 aa30.19■■■□□ 2.42
LSM6-202ENST00000502781 ZNF157P51786 506 aaPredicted RBP30.19■■■□□ 2.42
LSM6-202ENST00000502781 MAP3K9P80192 1104 aa30.19■■■□□ 2.42
LSM6-202ENST00000502781 AK9Q5TCS8 1911 aa30.19■■■□□ 2.42
LSM6-202ENST00000502781 WDR33Q9C0J8 1336 aaKnown RBP30.19■■■□□ 2.42
LSM6-202ENST00000502781 DDX60LQ5H9U9 1706 aaKnown RBP30.18■■■□□ 2.42
LSM6-202ENST00000502781 PHF20L1A8MW92 1017 aa30.18■■■□□ 2.42
LSM6-202ENST00000502781 SLURP2P0DP57 97 aa30.18■■■□□ 2.42
LSM6-202ENST00000502781 SDSP20132 328 aa30.18■■■□□ 2.42
LSM6-202ENST00000502781 SKAP1Q86WV1 359 aa30.18■■■□□ 2.42
LSM6-202ENST00000502781 CCDC102AQ96A19 550 aa30.18■■■□□ 2.42
LSM6-202ENST00000502781 CLMNQ96JQ2 1002 aa30.18■■■□□ 2.42
LSM6-202ENST00000502781 WRNIP1Q96S55 665 aa30.18■■■□□ 2.42
LSM6-202ENST00000502781 HELLSQ9NRZ9 838 aa30.18■■■□□ 2.42
LSM6-202ENST00000502781 SAP30BPQ9UHR5 308 aaKnown RBP30.18■■■□□ 2.42
LSM6-202ENST00000502781 SLC4A4Q9Y6R1 1079 aa30.18■■■□□ 2.42
LSM6-202ENST00000502781 SLC10A3P09131 477 aa30.17■■■□□ 2.42
LSM6-202ENST00000502781 RASAL3Q86YV0 1011 aa30.17■■■□□ 2.42
LSM6-202ENST00000502781 FOXP4Q8IVH2 680 aaPredicted RBP30.17■■■□□ 2.42
LSM6-202ENST00000502781 HERC5Q9UII4 1024 aaKnown RBP30.17■■■□□ 2.42
LSM6-202ENST00000502781 GNAT2P19087 354 aa30.16■■■□□ 2.42
LSM6-202ENST00000502781 PAXIP1Q6ZW49 1069 aaPredicted RBP30.16■■■□□ 2.42
LSM6-202ENST00000502781 FAM227BQ96M60 508 aa30.16■■■□□ 2.42
LSM6-202ENST00000502781 SIPA1L1O43166 1804 aa30.16■■■□□ 2.42
LSM6-202ENST00000502781 A0A0D9SFI3 127 aa30.15■■■□□ 2.42
LSM6-202ENST00000502781 GSG1L2A8MUP6 293 aa30.15■■■□□ 2.42
LSM6-202ENST00000502781 VGLL4Q14135 290 aa30.15■■■□□ 2.42
LSM6-202ENST00000502781 EHD4Q9H223 541 aa30.15■■■□□ 2.42
LSM6-202ENST00000502781 DNAJC18Q9H819 358 aa30.15■■■□□ 2.42
LSM6-202ENST00000502781 MCM9Q9NXL9 1143 aa30.15■■■□□ 2.42
LSM6-202ENST00000502781 OTOFQ9HC10 1997 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms