RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 ZKSCAN2Q63HK3 967 aa13.62□□□□□ -0.23
LSAMP-206ENST00000498645 TBC1D9Q6ZT07 1266 aa13.62□□□□□ -0.23
LSAMP-206ENST00000498645 TMEM57Q8N5G2 664 aa13.62□□□□□ -0.23
LSAMP-206ENST00000498645 SPATA5Q8NB90 893 aa13.62□□□□□ -0.23
LSAMP-206ENST00000498645 ARMC5Q96C12 935 aa13.62□□□□□ -0.23
LSAMP-206ENST00000498645 IDI2Q9BXS1 227 aa13.62□□□□□ -0.23
LSAMP-206ENST00000498645 DDX4Q9NQI0 724 aaKnown RBP13.62□□□□□ -0.23
LSAMP-206ENST00000498645 HMG20BQ9P0W2 317 aa13.62□□□□□ -0.23
LSAMP-206ENST00000498645 ATRNL1Q5VV63 1379 aa13.61□□□□□ -0.23
LSAMP-206ENST00000498645 DDTLA6NHG4 134 aaPredicted RBP13.61□□□□□ -0.23
LSAMP-206ENST00000498645 SLURP2P0DP57 97 aa13.61□□□□□ -0.23
LSAMP-206ENST00000498645 EN2P19622 333 aaPredicted RBP13.61□□□□□ -0.23
LSAMP-206ENST00000498645 SH3BP5LQ7L8J4 393 aa13.61□□□□□ -0.23
LSAMP-206ENST00000498645 ANKRD23Q86SG2 305 aa13.61□□□□□ -0.23
LSAMP-206ENST00000498645 NBPF11Q86T75 865 aa13.61□□□□□ -0.23
LSAMP-206ENST00000498645 SCYL3Q8IZE3 742 aa13.61□□□□□ -0.23
LSAMP-206ENST00000498645 TMEM106CQ9BVX2 250 aa13.61□□□□□ -0.23
LSAMP-206ENST00000498645 C1orf115Q9H7X2 142 aa13.61□□□□□ -0.23
LSAMP-206ENST00000498645 PICK1Q9NRD5 415 aa13.61□□□□□ -0.23
LSAMP-206ENST00000498645 RAI14Q9P0K7 980 aa13.61□□□□□ -0.23
LSAMP-206ENST00000498645 KCNH4Q9UQ05 1017 aa13.61□□□□□ -0.23
LSAMP-206ENST00000498645 BRCA2P51587 3418 aa13.61□□□□□ -0.23
LSAMP-206ENST00000498645 PTPRFP10586 1907 aa13.6□□□□□ -0.23
LSAMP-206ENST00000498645 SLC4A8Q2Y0W8 1093 aa13.6□□□□□ -0.23
LSAMP-206ENST00000498645 GADL1Q6ZQY3 521 aa13.6□□□□□ -0.23
LSAMP-206ENST00000498645 FTSJ3Q8IY81 847 aaKnown RBP13.6□□□□□ -0.23
LSAMP-206ENST00000498645 SH3TC2Q8TF17 1288 aa13.6□□□□□ -0.23
LSAMP-206ENST00000498645 ZNF333Q96JL9 665 aa13.6□□□□□ -0.23
LSAMP-206ENST00000498645 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.6□□□□□ -0.23
LSAMP-206ENST00000498645 ZHX2Q9Y6X8 837 aa13.6□□□□□ -0.23
LSAMP-206ENST00000498645 PHIPQ8WWQ0 1821 aa13.6□□□□□ -0.23
LSAMP-206ENST00000498645 ATAD5Q96QE3 1844 aa13.6□□□□□ -0.23
LSAMP-206ENST00000498645 MAST2Q6P0Q8 1798 aa13.59□□□□□ -0.23
LSAMP-206ENST00000498645 FAM196BA6NMK8 535 aa13.59□□□□□ -0.23
LSAMP-206ENST00000498645 PHF20L1A8MW92 1017 aa13.59□□□□□ -0.23
LSAMP-206ENST00000498645 ZBTB22O15209 634 aa13.59□□□□□ -0.23
LSAMP-206ENST00000498645 CYP2C8P10632 490 aa13.59□□□□□ -0.23
LSAMP-206ENST00000498645 PTPRAP18433 802 aa13.59□□□□□ -0.23
LSAMP-206ENST00000498645 ARID4AP29374 1257 aaPredicted RBP13.59□□□□□ -0.23
LSAMP-206ENST00000498645 GSTO1P78417 241 aa13.59□□□□□ -0.23
LSAMP-206ENST00000498645 ITPRIPQ8IWB1 547 aa13.59□□□□□ -0.23
LSAMP-206ENST00000498645 MIER1Q8N108 512 aa13.59□□□□□ -0.23
LSAMP-206ENST00000498645 ZNF384Q8TF68 577 aa13.59□□□□□ -0.23
LSAMP-206ENST00000498645 FAM163AQ96GL9 167 aaPredicted RBP13.59□□□□□ -0.23
LSAMP-206ENST00000498645 PARK7Q99497 189 aaKnown RBP13.59□□□□□ -0.23
LSAMP-206ENST00000498645 LRP2BPQ9P2M1 347 aa13.59□□□□□ -0.23
LSAMP-206ENST00000498645 MGAMO43451 1857 aa13.59□□□□□ -0.23
LSAMP-206ENST00000498645 MYO5AQ9Y4I1 1855 aaKnown RBP13.59□□□□□ -0.23
LSAMP-206ENST00000498645 GPR75-ASB3A0A0A6YYF3 556 aa13.58□□□□□ -0.24
LSAMP-206ENST00000498645 FMNL1O95466 1100 aaPredicted RBP13.58□□□□□ -0.24
LSAMP-206ENST00000498645 LDHCP07864 332 aa13.58□□□□□ -0.24
LSAMP-206ENST00000498645 UQCRFS1P1P0C7P4 283 aa13.58□□□□□ -0.24
LSAMP-206ENST00000498645 MCAMP43121 646 aa13.58□□□□□ -0.24
LSAMP-206ENST00000498645 PSMC4P43686 418 aa13.58□□□□□ -0.24
LSAMP-206ENST00000498645 RHBDL3P58872 404 aa13.58□□□□□ -0.24
LSAMP-206ENST00000498645 MOGSQ13724 837 aa13.58□□□□□ -0.24
LSAMP-206ENST00000498645 TTC39AQ5SRH9 613 aa13.58□□□□□ -0.24
LSAMP-206ENST00000498645 C17orf99Q6UX52 265 aa13.58□□□□□ -0.24
LSAMP-206ENST00000498645 CCDC84Q86UT8 332 aaPredicted RBP13.58□□□□□ -0.24
LSAMP-206ENST00000498645 NSUN4Q96CB9 384 aaKnown RBP13.58□□□□□ -0.24
LSAMP-206ENST00000498645 NOL10Q9BSC4 688 aaKnown RBP13.58□□□□□ -0.24
LSAMP-206ENST00000498645 SNRKQ9NRH2 765 aa13.58□□□□□ -0.24
LSAMP-206ENST00000498645 TRIM75PA6NK02 468 aa13.57□□□□□ -0.24
LSAMP-206ENST00000498645 CXCL11O14625 94 aa13.57□□□□□ -0.24
LSAMP-206ENST00000498645 SURF6O75683 361 aaKnown RBP13.57□□□□□ -0.24
LSAMP-206ENST00000498645 GNRH1P01148 92 aa13.57□□□□□ -0.24
LSAMP-206ENST00000498645 CTGFP29279 349 aa13.57□□□□□ -0.24
LSAMP-206ENST00000498645 TNNI3KQ59H18 835 aa13.57□□□□□ -0.24
LSAMP-206ENST00000498645 GPAT2Q6NUI2 795 aa13.57□□□□□ -0.24
LSAMP-206ENST00000498645 TRIM47Q96LD4 638 aa13.57□□□□□ -0.24
LSAMP-206ENST00000498645 DBNDD2Q9BQY9 259 aa13.57□□□□□ -0.24
LSAMP-206ENST00000498645 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.57□□□□□ -0.24
LSAMP-206ENST00000498645 FPGT-TNNI3KV9GXZ4 949 aa13.57□□□□□ -0.24
LSAMP-206ENST00000498645 ADGRA2Q96PE1 1338 aa13.57□□□□□ -0.24
LSAMP-206ENST00000498645 CDK5RAP2Q96SN8 1893 aa13.57□□□□□ -0.24
LSAMP-206ENST00000498645 A0A0G2JLL6 359 aaPredicted RBP13.56□□□□□ -0.24
LSAMP-206ENST00000498645 CTNND1O60716 968 aaKnown RBP13.56□□□□□ -0.24
LSAMP-206ENST00000498645 OSBPP22059 807 aa13.56□□□□□ -0.24
LSAMP-206ENST00000498645 POLA2Q14181 598 aa13.56□□□□□ -0.24
LSAMP-206ENST00000498645 CCDC158Q5M9N0 1113 aa13.56□□□□□ -0.24
LSAMP-206ENST00000498645 FASTKD5Q7L8L6 764 aaKnown RBP13.56□□□□□ -0.24
LSAMP-206ENST00000498645 PRRT2Q7Z6L0 340 aaPredicted RBP13.56□□□□□ -0.24
LSAMP-206ENST00000498645 TEX11Q8IYF3 940 aa13.56□□□□□ -0.24
LSAMP-206ENST00000498645 RAET1EQ8TD07 263 aa13.56□□□□□ -0.24
LSAMP-206ENST00000498645 AFG3L2Q9Y4W6 797 aa13.56□□□□□ -0.24
LSAMP-206ENST00000498645 RLBP1P12271 317 aa13.55□□□□□ -0.24
LSAMP-206ENST00000498645 HOXD10P28358 340 aa13.55□□□□□ -0.24
LSAMP-206ENST00000498645 PRMT2P55345 433 aa13.55□□□□□ -0.24
LSAMP-206ENST00000498645 ATP8B2P98198 1209 aa13.55□□□□□ -0.24
LSAMP-206ENST00000498645 DIEXFQ68CQ4 756 aaKnown RBP13.55□□□□□ -0.24
LSAMP-206ENST00000498645 NAA16Q6N069 864 aaPredicted RBP13.55□□□□□ -0.24
LSAMP-206ENST00000498645 SH3RF3Q8TEJ3 882 aaPredicted RBP13.55□□□□□ -0.24
LSAMP-206ENST00000498645 OSBPL5Q9H0X9 879 aaPredicted RBP13.55□□□□□ -0.24
LSAMP-206ENST00000498645 AATFQ9NY61 560 aaKnown RBP eCLIP13.55□□□□□ -0.24
LSAMP-206ENST00000498645 SRRDQ9UH36 339 aa13.55□□□□□ -0.24
LSAMP-206ENST00000498645 MYPNQ86TC9 1320 aa13.55□□□□□ -0.24
LSAMP-206ENST00000498645 FCGRTP55899 365 aa13.54□□□□□ -0.24
LSAMP-206ENST00000498645 MAP3K10Q02779 954 aa13.54□□□□□ -0.24
LSAMP-206ENST00000498645 SSH3Q8TE77 659 aa13.54□□□□□ -0.24
LSAMP-206ENST00000498645 SMCR8Q8TEV9 937 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms