RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 ATP8B2P98198 1209 aa17.79■□□□□ 0.44
HDLBP-247ENST00000498595 POLA2Q14181 598 aa17.79■□□□□ 0.44
HDLBP-247ENST00000498595 SCYL3Q8IZE3 742 aa17.79■□□□□ 0.44
HDLBP-247ENST00000498595 KCNH4Q9UQ05 1017 aa17.79■□□□□ 0.44
HDLBP-247ENST00000498595 PDHXO00330 501 aa17.78■□□□□ 0.44
HDLBP-247ENST00000498595 CXCL11O14625 94 aa17.78■□□□□ 0.44
HDLBP-247ENST00000498595 SLC9C1Q4G0N8 1177 aa17.78■□□□□ 0.44
HDLBP-247ENST00000498595 TBC1D9Q6ZT07 1266 aa17.78■□□□□ 0.44
HDLBP-247ENST00000498595 SSH3Q8TE77 659 aa17.78■□□□□ 0.44
HDLBP-247ENST00000498595 C1orf115Q9H7X2 142 aa17.78■□□□□ 0.44
HDLBP-247ENST00000498595 ZBED9Q6R2W3 1325 aa17.77■□□□□ 0.44
HDLBP-247ENST00000498595 CTNND1O60716 968 aaKnown RBP17.77■□□□□ 0.44
HDLBP-247ENST00000498595 GNRH1P01148 92 aa17.77■□□□□ 0.44
HDLBP-247ENST00000498595 MS4A1P11836 297 aa17.77■□□□□ 0.44
HDLBP-247ENST00000498595 LACTBP83111 547 aaPredicted RBP17.77■□□□□ 0.44
HDLBP-247ENST00000498595 TNNI3KQ59H18 835 aa17.77■□□□□ 0.44
HDLBP-247ENST00000498595 PI16Q6UXB8 463 aa17.77■□□□□ 0.44
HDLBP-247ENST00000498595 FASTKD5Q7L8L6 764 aaKnown RBP17.77■□□□□ 0.44
HDLBP-247ENST00000498595 ARMC5Q96C12 935 aa17.77■□□□□ 0.44
HDLBP-247ENST00000498595 NSUN4Q96CB9 384 aaKnown RBP17.77■□□□□ 0.44
HDLBP-247ENST00000498595 PARK7Q99497 189 aaKnown RBP17.77■□□□□ 0.44
HDLBP-247ENST00000498595 TMEM106CQ9BVX2 250 aa17.77■□□□□ 0.44
HDLBP-247ENST00000498595 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.77■□□□□ 0.44
HDLBP-247ENST00000498595 ZHX2Q9Y6X8 837 aa17.77■□□□□ 0.44
HDLBP-247ENST00000498595 FPGT-TNNI3KV9GXZ4 949 aa17.77■□□□□ 0.44
HDLBP-247ENST00000498595 RFX7Q2KHR2 1363 aa17.77■□□□□ 0.43
HDLBP-247ENST00000498595 NPM3O75607 178 aaKnown RBP17.76■□□□□ 0.43
HDLBP-247ENST00000498595 BAG3O95817 575 aa17.76■□□□□ 0.43
HDLBP-247ENST00000498595 PLCG2P16885 1265 aa17.76■□□□□ 0.43
HDLBP-247ENST00000498595 MCAMP43121 646 aa17.76■□□□□ 0.43
HDLBP-247ENST00000498595 PRMT2P55345 433 aa17.76■□□□□ 0.43
HDLBP-247ENST00000498595 NAA16Q6N069 864 aaPredicted RBP17.76■□□□□ 0.43
HDLBP-247ENST00000498595 TEX11Q8IYF3 940 aa17.76■□□□□ 0.43
HDLBP-247ENST00000498595 DDX4Q9NQI0 724 aaKnown RBP17.76■□□□□ 0.43
HDLBP-247ENST00000498595 AK9Q5TCS8 1911 aa17.76■□□□□ 0.43
HDLBP-247ENST00000498595 MYH2Q9UKX2 1941 aa17.75■□□□□ 0.43
HDLBP-247ENST00000498595 DDTLA6NHG4 134 aaPredicted RBP17.75■□□□□ 0.43
HDLBP-247ENST00000498595 PHF20L1A8MW92 1017 aa17.75■□□□□ 0.43
HDLBP-247ENST00000498595 PTPRAP18433 802 aa17.75■□□□□ 0.43
HDLBP-247ENST00000498595 RHBDL3P58872 404 aa17.75■□□□□ 0.43
HDLBP-247ENST00000498595 SH3BP5LQ7L8J4 393 aa17.75■□□□□ 0.43
HDLBP-247ENST00000498595 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.75■□□□□ 0.433e-9■□□□□ 8.7
HDLBP-247ENST00000498595 SNRKQ9NRH2 765 aa17.75■□□□□ 0.43
HDLBP-247ENST00000498595 ATRNL1Q5VV63 1379 aa17.75■□□□□ 0.43
HDLBP-247ENST00000498595 ZBTB7BO15156 539 aaPredicted RBP17.74■□□□□ 0.43
HDLBP-247ENST00000498595 HOXD10P28358 340 aa17.74■□□□□ 0.43
HDLBP-247ENST00000498595 MAP3K10Q02779 954 aa17.74■□□□□ 0.43
HDLBP-247ENST00000498595 C17orf99Q6UX52 265 aa17.74■□□□□ 0.43
HDLBP-247ENST00000498595 GADL1Q6ZQY3 521 aa17.74■□□□□ 0.43
HDLBP-247ENST00000498595 DBNDD2Q9BQY9 259 aa17.74■□□□□ 0.43
HDLBP-247ENST00000498595 CPA4Q9UI42 421 aa17.74■□□□□ 0.43
HDLBP-247ENST00000498595 PTCH2Q9Y6C5 1203 aa17.74■□□□□ 0.43
HDLBP-247ENST00000498595 TBC1D12O60347 775 aa17.73■□□□□ 0.43
HDLBP-247ENST00000498595 IGSF3O75054 1194 aa17.73■□□□□ 0.43
HDLBP-247ENST00000498595 FMNL1O95466 1100 aaPredicted RBP17.73■□□□□ 0.43
HDLBP-247ENST00000498595 RLBP1P12271 317 aa17.73■□□□□ 0.43
HDLBP-247ENST00000498595 SLC4A8Q2Y0W8 1093 aa17.73■□□□□ 0.43
HDLBP-247ENST00000498595 PRPF38BQ5VTL8 546 aaKnown RBP17.73■□□□□ 0.43
HDLBP-247ENST00000498595 ERC1Q8IUD2 1116 aa17.73■□□□□ 0.43
HDLBP-247ENST00000498595 ZNF384Q8TF68 577 aa17.73■□□□□ 0.43
HDLBP-247ENST00000498595 TRIM34Q9BYJ4 488 aa17.73■□□□□ 0.43
HDLBP-247ENST00000498595 OSBPL5Q9H0X9 879 aaPredicted RBP17.73■□□□□ 0.43
HDLBP-247ENST00000498595 NOP58Q9Y2X3 529 aaKnown RBP17.73■□□□□ 0.43
HDLBP-247ENST00000498595 DOCK2Q92608 1830 aa17.72■□□□□ 0.43
HDLBP-247ENST00000498595 A0A0G2JLL6 359 aaPredicted RBP17.72■□□□□ 0.43
HDLBP-247ENST00000498595 PSMC4P43686 418 aa17.72■□□□□ 0.43
HDLBP-247ENST00000498595 PRRT2Q7Z6L0 340 aaPredicted RBP17.72■□□□□ 0.43
HDLBP-247ENST00000498595 ZNF512BQ96KM6 892 aaPredicted RBP17.72■□□□□ 0.43
HDLBP-247ENST00000498595 ARHGAP39Q9C0H5 1083 aa17.72■□□□□ 0.43
HDLBP-247ENST00000498595 AFG3L2Q9Y4W6 797 aa17.72■□□□□ 0.43
HDLBP-247ENST00000498595 COL2A1P02458 1487 aaPredicted RBP17.71■□□□□ 0.43
HDLBP-247ENST00000498595 POTEFA5A3E0 1075 aa17.71■□□□□ 0.43
HDLBP-247ENST00000498595 TRIM75PA6NK02 468 aa17.71■□□□□ 0.43
HDLBP-247ENST00000498595 ECM2O94769 699 aaPredicted RBP17.71■□□□□ 0.43
HDLBP-247ENST00000498595 CAP1Q01518 475 aa17.71■□□□□ 0.43
HDLBP-247ENST00000498595 HSP90AB4PQ58FF6 505 aa17.71■□□□□ 0.43
HDLBP-247ENST00000498595 SH3RF3Q8TEJ3 882 aaPredicted RBP17.71■□□□□ 0.43
HDLBP-247ENST00000498595 SMCR8Q8TEV9 937 aaPredicted RBP17.71■□□□□ 0.43
HDLBP-247ENST00000498595 ZNF333Q96JL9 665 aa17.71■□□□□ 0.43
HDLBP-247ENST00000498595 DHX36Q9H2U1 1008 aaKnown RBP17.71■□□□□ 0.43
HDLBP-247ENST00000498595 AATFQ9NY61 560 aaKnown RBP eCLIP17.71■□□□□ 0.43
HDLBP-247ENST00000498595 HERC5Q9UII4 1024 aaKnown RBP17.71■□□□□ 0.43
HDLBP-247ENST00000498595 FCGRTP55899 365 aa17.7■□□□□ 0.42
HDLBP-247ENST00000498595 MOGSQ13724 837 aa17.7■□□□□ 0.42
HDLBP-247ENST00000498595 CEP85Q6P2H3 762 aa17.7■□□□□ 0.42
HDLBP-247ENST00000498595 RAET1EQ8TD07 263 aa17.7■□□□□ 0.42
HDLBP-247ENST00000498595 PANK1Q8TE04 598 aa17.7■□□□□ 0.42
HDLBP-247ENST00000498595 TBC1D2Q9BYX2 928 aa17.7■□□□□ 0.42
HDLBP-247ENST00000498595 CCDC8Q9H0W5 538 aaPredicted RBP17.7■□□□□ 0.42
HDLBP-247ENST00000498595 PI4KBQ9UBF8 816 aa17.7■□□□□ 0.42
HDLBP-247ENST00000498595 SLC45A1Q9Y2W3 748 aa17.7■□□□□ 0.42
HDLBP-247ENST00000498595 CYP2E1P05181 493 aaPredicted RBP17.69■□□□□ 0.42
HDLBP-247ENST00000498595 CYP2C8P10632 490 aa17.69■□□□□ 0.42
HDLBP-247ENST00000498595 ZAP70P43403 619 aa17.69■□□□□ 0.42
HDLBP-247ENST00000498595 GPAT2Q6NUI2 795 aa17.69■□□□□ 0.42
HDLBP-247ENST00000498595 CERS3Q8IU89 383 aa17.69■□□□□ 0.42
HDLBP-247ENST00000498595 CRACR2BQ8N4Y2 399 aaPredicted RBP17.69■□□□□ 0.42
HDLBP-247ENST00000498595 CHMP4BQ9H444 224 aaKnown RBP17.69■□□□□ 0.42
HDLBP-247ENST00000498595 AS3MTQ9HBK9 375 aa17.69■□□□□ 0.42
HDLBP-247ENST00000498595 SRRDQ9UH36 339 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms