RNA–Protein interactions for RNA: ENST00000498347.1

FAM3D-205, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 2

Gene FAM3D, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-205ENST00000498347 GRIN2CQ14957 1233 aa11.46□□□□□ -0.57
FAM3D-205ENST00000498347 C9orf50Q5SZB4 431 aa11.46□□□□□ -0.57
FAM3D-205ENST00000498347 APOBEC3HQ6NTF7 200 aaKnown RBP11.46□□□□□ -0.57
FAM3D-205ENST00000498347 TRMT44Q8IYL2 757 aaKnown RBP11.46□□□□□ -0.57
FAM3D-205ENST00000498347 PI4KAP1Q8N8J0 262 aa11.46□□□□□ -0.57
FAM3D-205ENST00000498347 IL27Q8NEV9 243 aa11.46□□□□□ -0.57
FAM3D-205ENST00000498347 PICK1Q9NRD5 415 aa11.46□□□□□ -0.57
FAM3D-205ENST00000498347 MUC3AQ02505 3323 aa11.45□□□□□ -0.58
FAM3D-205ENST00000498347 NEURL1BA8MQ27 555 aa11.45□□□□□ -0.58
FAM3D-205ENST00000498347 XRCC5P13010 732 aaKnown RBP11.45□□□□□ -0.58
FAM3D-205ENST00000498347 PTPRAP18433 802 aa11.45□□□□□ -0.58
FAM3D-205ENST00000498347 GCLCP48506 637 aaPredicted RBP11.45□□□□□ -0.58
FAM3D-205ENST00000498347 GRIK5Q16478 980 aa11.45□□□□□ -0.58
FAM3D-205ENST00000498347 CWF19L2Q2TBE0 894 aaKnown RBP11.45□□□□□ -0.58
FAM3D-205ENST00000498347 ALYREFQ86V81 257 aaKnown RBP11.45□□□□□ -0.58
FAM3D-205ENST00000498347 TBC1D22AQ8WUA7 517 aa11.45□□□□□ -0.58
FAM3D-205ENST00000498347 TRIB2Q92519 343 aa11.45□□□□□ -0.58
FAM3D-205ENST00000498347 PNMA3Q9UL41 463 aa11.45□□□□□ -0.58
FAM3D-205ENST00000498347 DDX60LQ5H9U9 1706 aaKnown RBP11.45□□□□□ -0.58
FAM3D-205ENST00000498347 EYSQ5T1H1 3165 aa11.44□□□□□ -0.58
FAM3D-205ENST00000498347 LAMA2P24043 3122 aaKnown RBP11.44□□□□□ -0.58
FAM3D-205ENST00000498347 ELL2O00472 640 aaPredicted RBP11.44□□□□□ -0.58
FAM3D-205ENST00000498347 CYP2B6P20813 491 aa11.44□□□□□ -0.58
FAM3D-205ENST00000498347 GYG1P46976 350 aa11.44□□□□□ -0.58
FAM3D-205ENST00000498347 CACNB2Q08289 660 aaPredicted RBP11.44□□□□□ -0.58
FAM3D-205ENST00000498347 UBE4AQ14139 1066 aa11.44□□□□□ -0.58
FAM3D-205ENST00000498347 HHIPL2Q6UWX4 724 aa11.44□□□□□ -0.58
FAM3D-205ENST00000498347 PPM1EQ8WY54 764 aa11.44□□□□□ -0.58
FAM3D-205ENST00000498347 LRFN3Q9BTN0 628 aa11.44□□□□□ -0.58
FAM3D-205ENST00000498347 THEGQ9P2T0 379 aa11.44□□□□□ -0.58
FAM3D-205ENST00000498347 TRIM35Q9UPQ4 493 aa11.44□□□□□ -0.58
FAM3D-205ENST00000498347 AGTPBP1Q9UPW5 1226 aa11.44□□□□□ -0.58
FAM3D-205ENST00000498347 ARAP2Q8WZ64 1704 aa11.43□□□□□ -0.58
FAM3D-205ENST00000498347 RPAP1Q9BWH6 1393 aaPredicted RBP11.43□□□□□ -0.58
FAM3D-205ENST00000498347 GCKRQ14397 625 aa11.43□□□□□ -0.58
FAM3D-205ENST00000498347 AKNAD1Q5T1N1 836 aa11.43□□□□□ -0.58
FAM3D-205ENST00000498347 CCDC30Q5VVM6 783 aa11.43□□□□□ -0.58
FAM3D-205ENST00000498347 LDHAL6AQ6ZMR3 332 aa11.43□□□□□ -0.58
FAM3D-205ENST00000498347 SCYL3Q8IZE3 742 aa11.43□□□□□ -0.58
FAM3D-205ENST00000498347 SPEF2Q9C093 1822 aa11.43□□□□□ -0.58
FAM3D-205ENST00000498347 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.42□□□□□ -0.58
FAM3D-205ENST00000498347 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.42□□□□□ -0.58
FAM3D-205ENST00000498347 PHF20L1A8MW92 1017 aa11.42□□□□□ -0.58
FAM3D-205ENST00000498347 FRAT2O75474 233 aaPredicted RBP11.42□□□□□ -0.58
FAM3D-205ENST00000498347 ATN1P54259 1190 aaPredicted RBP11.42□□□□□ -0.58
FAM3D-205ENST00000498347 TCP10Q12799 353 aa11.42□□□□□ -0.58
FAM3D-205ENST00000498347 BADQ92934 168 aa11.42□□□□□ -0.58
FAM3D-205ENST00000498347 GAS2L1Q99501 681 aaPredicted RBP11.42□□□□□ -0.58
FAM3D-205ENST00000498347 NUDT12Q9BQG2 462 aa11.42□□□□□ -0.58
FAM3D-205ENST00000498347 ZNF576Q9H609 170 aa11.42□□□□□ -0.58
FAM3D-205ENST00000498347 CNNM1Q9NRU3 951 aa11.42□□□□□ -0.58
FAM3D-205ENST00000498347 MBIPQ9NS73 344 aa11.42□□□□□ -0.58
FAM3D-205ENST00000498347 SUGT1Q9Y2Z0 365 aa11.42□□□□□ -0.58
FAM3D-205ENST00000498347 MYO9BQ13459 2157 aa11.41□□□□□ -0.58
FAM3D-205ENST00000498347 MAST3O60307 1309 aa11.41□□□□□ -0.58
FAM3D-205ENST00000498347 MYH3P11055 1940 aa11.41□□□□□ -0.58
FAM3D-205ENST00000498347 CCND3P30281 292 aaPredicted RBP11.41□□□□□ -0.58
FAM3D-205ENST00000498347 CASP7P55210 303 aa11.41□□□□□ -0.58
FAM3D-205ENST00000498347 RTP1P59025 263 aa11.41□□□□□ -0.58
FAM3D-205ENST00000498347 CHAF1AQ13111 956 aaPredicted RBP11.41□□□□□ -0.58
FAM3D-205ENST00000498347 PABPC4Q13310 644 aaKnown RBP eCLIP11.41□□□□□ -0.58
FAM3D-205ENST00000498347 FBXO33Q7Z6M2 555 aa11.41□□□□□ -0.58
FAM3D-205ENST00000498347 VPS37DQ86XT2 251 aa11.41□□□□□ -0.58
FAM3D-205ENST00000498347 LRRFIP2Q9Y608 721 aaKnown RBP11.41□□□□□ -0.58
FAM3D-205ENST00000498347 TRIM75PA6NK02 468 aa11.4□□□□□ -0.58
FAM3D-205ENST00000498347 CTNND1O60716 968 aaKnown RBP11.4□□□□□ -0.58
FAM3D-205ENST00000498347 CCDC57Q2TAC2 916 aa11.4□□□□□ -0.58
FAM3D-205ENST00000498347 TAF7LQ5H9L4 462 aa11.4□□□□□ -0.58
FAM3D-205ENST00000498347 TMEM31Q5JXX7 168 aa11.4□□□□□ -0.58
FAM3D-205ENST00000498347 PROCA1Q8NCQ7 364 aaPredicted RBP11.4□□□□□ -0.58
FAM3D-205ENST00000498347 MYH16Q9H6N6 1097 aa11.4□□□□□ -0.58
FAM3D-205ENST00000498347 SPINK5Q9NQ38 1064 aaPredicted RBP11.4□□□□□ -0.58
FAM3D-205ENST00000498347 ATP11BQ9Y2G3 1177 aa11.4□□□□□ -0.58
FAM3D-205ENST00000498347 CHMP3Q9Y3E7 222 aa11.4□□□□□ -0.58
FAM3D-205ENST00000498347 MUC6Q6W4X9 2439 aa11.4□□□□□ -0.58
FAM3D-205ENST00000498347 FANCIQ9NVI1 1328 aa11.39□□□□□ -0.59
FAM3D-205ENST00000498347 ZNF853P0CG23 659 aa11.39□□□□□ -0.59
FAM3D-205ENST00000498347 BMP1P13497 986 aa11.39□□□□□ -0.59
FAM3D-205ENST00000498347 ZKSCAN1P17029 563 aaPredicted RBP11.39□□□□□ -0.59
FAM3D-205ENST00000498347 FOXO4P98177 505 aa11.39□□□□□ -0.59
FAM3D-205ENST00000498347 MAP3K10Q02779 954 aa11.39□□□□□ -0.59
FAM3D-205ENST00000498347 TREML2Q5T2D2 321 aa11.39□□□□□ -0.59
FAM3D-205ENST00000498347 POTEEQ6S8J3 1075 aa11.39□□□□□ -0.59
FAM3D-205ENST00000498347 SLC39A5Q6ZMH5 540 aa11.39□□□□□ -0.59
FAM3D-205ENST00000498347 SOCS4Q8WXH5 440 aa11.39□□□□□ -0.59
FAM3D-205ENST00000498347 RNPC3Q96LT9 517 aaKnown RBP11.39□□□□□ -0.59
FAM3D-205ENST00000498347 TSPYL2Q9H2G4 693 aaPredicted RBP11.39□□□□□ -0.59
FAM3D-205ENST00000498347 MORF4L1Q9UBU8 362 aa11.39□□□□□ -0.59
FAM3D-205ENST00000498347 IQSEC3Q9UPP2 1182 aaPredicted RBP11.39□□□□□ -0.59
FAM3D-205ENST00000498347 DNAJB2P25686 324 aa11.38□□□□□ -0.59
FAM3D-205ENST00000498347 CAVIN4Q5BKX8 364 aa11.38□□□□□ -0.59
FAM3D-205ENST00000498347 CDC42EP5Q6NZY7 148 aa11.38□□□□□ -0.59
FAM3D-205ENST00000498347 LPAR1Q92633 364 aa11.38□□□□□ -0.59
FAM3D-205ENST00000498347 ZNF594Q96JF6 807 aaPredicted RBP11.38□□□□□ -0.59
FAM3D-205ENST00000498347 P2RX7Q99572 595 aaKnown RBP11.38□□□□□ -0.59
FAM3D-205ENST00000498347 EPHX3Q9H6B9 360 aa11.38□□□□□ -0.59
FAM3D-205ENST00000498347 PRDM5Q9NQX1 630 aaPredicted RBP11.38□□□□□ -0.59
FAM3D-205ENST00000498347 RBM19Q9Y4C8 960 aaKnown RBP11.38□□□□□ -0.59
FAM3D-205ENST00000498347 AK9Q5TCS8 1911 aa11.38□□□□□ -0.59
FAM3D-205ENST00000498347 DNM1LO00429 736 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms