RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 C11orf16Q9NQ32 467 aa7.18□□□□□ -1.26
HMGXB4-208ENST00000498325 TRAK1Q9UPV9 953 aa7.18□□□□□ -1.26
HMGXB4-208ENST00000498325 CENPJQ9HC77 1338 aaPredicted RBP7.18□□□□□ -1.26
HMGXB4-208ENST00000498325 ARSDP51689 593 aa7.17□□□□□ -1.26
HMGXB4-208ENST00000498325 GDF6Q6KF10 455 aaPredicted RBP7.17□□□□□ -1.26
HMGXB4-208ENST00000498325 KRT28Q7Z3Y7 464 aa7.17□□□□□ -1.26
HMGXB4-208ENST00000498325 AGGF1Q8N302 714 aaeCLIP7.17□□□□□ -1.26
HMGXB4-208ENST00000498325 IL22RA1Q8N6P7 574 aa7.17□□□□□ -1.26
HMGXB4-208ENST00000498325 PLD4Q96BZ4 506 aa7.17□□□□□ -1.26
HMGXB4-208ENST00000498325 PRKRIP1Q9H875 184 aaPredicted RBP7.17□□□□□ -1.26
HMGXB4-208ENST00000498325 LRPPRCP42704 1394 aaKnown RBP7.17□□□□□ -1.26
HMGXB4-208ENST00000498325 SBNO2Q9Y2G9 1366 aa7.17□□□□□ -1.26
HMGXB4-208ENST00000498325 ATP9BO43861 1147 aa7.16□□□□□ -1.26
HMGXB4-208ENST00000498325 GRIK1P39086 918 aa7.16□□□□□ -1.26
HMGXB4-208ENST00000498325 INTS5Q6P9B9 1019 aaKnown RBP7.16□□□□□ -1.26
HMGXB4-208ENST00000498325 MAP4K3Q8IVH8 894 aa7.16□□□□□ -1.26
HMGXB4-208ENST00000498325 ADAMTS19Q8TE59 1207 aa7.16□□□□□ -1.26
HMGXB4-208ENST00000498325 ZNF526Q8TF50 670 aaPredicted RBP7.16□□□□□ -1.26
HMGXB4-208ENST00000498325 ARXQ96QS3 562 aa7.16□□□□□ -1.26
HMGXB4-208ENST00000498325 KLK14Q9P0G3 267 aa7.16□□□□□ -1.26
HMGXB4-208ENST00000498325 KTN1Q86UP2 1357 aaKnown RBP7.16□□□□□ -1.26
HMGXB4-208ENST00000498325 ADGRB1O14514 1584 aa7.16□□□□□ -1.26
HMGXB4-208ENST00000498325 GOLGB1Q14789 3259 aaKnown RBP7.16□□□□□ -1.26
HMGXB4-208ENST00000498325 DHX15O43143 795 aaKnown RBP7.15□□□□□ -1.26
HMGXB4-208ENST00000498325 ADAMTS4O75173 837 aa7.15□□□□□ -1.26
HMGXB4-208ENST00000498325 SPINK2P20155 84 aa7.15□□□□□ -1.26
HMGXB4-208ENST00000498325 RASA1P20936 1047 aa7.15□□□□□ -1.26
HMGXB4-208ENST00000498325 SETDB1Q15047 1291 aa7.15□□□□□ -1.26
HMGXB4-208ENST00000498325 PTF1AQ7RTS3 328 aa7.15□□□□□ -1.26
HMGXB4-208ENST00000498325 ZDHHC13Q8IUH4 622 aa7.15□□□□□ -1.26
HMGXB4-208ENST00000498325 YTHDC1Q96MU7 727 aaKnown RBP7.15□□□□□ -1.26
HMGXB4-208ENST00000498325 PUS7Q96PZ0 661 aaKnown RBP7.15□□□□□ -1.26
HMGXB4-208ENST00000498325 TLR7Q9NYK1 1049 aaKnown RBP7.15□□□□□ -1.26
HMGXB4-208ENST00000498325 POGKQ9P215 609 aa7.15□□□□□ -1.26
HMGXB4-208ENST00000498325 SPATA31A1Q5TZJ5 1347 aa7.15□□□□□ -1.26
HMGXB4-208ENST00000498325 MAP3K5Q99683 1374 aa7.15□□□□□ -1.26
HMGXB4-208ENST00000498325 LOC102724428A0A0B4J2F2 783 aa7.14□□□□□ -1.27
HMGXB4-208ENST00000498325 J3QW42 95 aa7.14□□□□□ -1.27
HMGXB4-208ENST00000498325 SEC13P55735 322 aa7.14□□□□□ -1.27
HMGXB4-208ENST00000498325 SIK1P57059 783 aa7.14□□□□□ -1.27
HMGXB4-208ENST00000498325 RALBP1Q15311 655 aa7.14□□□□□ -1.27
HMGXB4-208ENST00000498325 TNS3Q68CZ2 1445 aa7.14□□□□□ -1.27
HMGXB4-208ENST00000498325 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.14□□□□□ -1.27
HMGXB4-208ENST00000498325 EVC2Q86UK5 1308 aa7.14□□□□□ -1.27
HMGXB4-208ENST00000498325 UCN2Q96RP3 112 aa7.14□□□□□ -1.27
HMGXB4-208ENST00000498325 UBL7Q96S82 380 aaPredicted RBP7.14□□□□□ -1.27
HMGXB4-208ENST00000498325 HINFPQ9BQA5 517 aa7.14□□□□□ -1.27
HMGXB4-208ENST00000498325 MTFR1LQ9H019 292 aa7.14□□□□□ -1.27
HMGXB4-208ENST00000498325 YTHDC2Q9H6S0 1430 aaKnown RBP7.14□□□□□ -1.27
HMGXB4-208ENST00000498325 PANK3Q9H999 370 aa7.14□□□□□ -1.27
HMGXB4-208ENST00000498325 STK26Q9P289 416 aa7.14□□□□□ -1.27
HMGXB4-208ENST00000498325 ABCA3Q99758 1704 aa7.13□□□□□ -1.27
HMGXB4-208ENST00000498325 GHRHP01286 108 aa7.13□□□□□ -1.27
HMGXB4-208ENST00000498325 HTRA3P83110 453 aa7.13□□□□□ -1.27
HMGXB4-208ENST00000498325 NFIAQ12857 509 aa7.13□□□□□ -1.27
HMGXB4-208ENST00000498325 JMYQ8N9B5 988 aa7.13□□□□□ -1.27
HMGXB4-208ENST00000498325 WWC3Q9ULE0 1092 aa7.13□□□□□ -1.27
HMGXB4-208ENST00000498325 KNSTRNQ9Y448 316 aa7.13□□□□□ -1.27
HMGXB4-208ENST00000498325 CDC42BPGQ6DT37 1551 aa7.12□□□□□ -1.27
HMGXB4-208ENST00000498325 ABCC11Q96J66 1382 aa7.12□□□□□ -1.27
HMGXB4-208ENST00000498325 PLSCR1O15162 318 aa7.12□□□□□ -1.27
HMGXB4-208ENST00000498325 MICAL2O94851 1124 aa7.12□□□□□ -1.27
HMGXB4-208ENST00000498325 WNT11O96014 354 aa7.12□□□□□ -1.27
HMGXB4-208ENST00000498325 PSAPP07602 524 aa7.12□□□□□ -1.27
HMGXB4-208ENST00000498325 PDE3BQ13370 1112 aa7.12□□□□□ -1.27
HMGXB4-208ENST00000498325 DGKZQ13574 1117 aa7.12□□□□□ -1.27
HMGXB4-208ENST00000498325 NLGN2Q8NFZ4 835 aa7.12□□□□□ -1.27
HMGXB4-208ENST00000498325 CEP41Q9BYV8 373 aa7.12□□□□□ -1.27
HMGXB4-208ENST00000498325 RBSNQ9H1K0 784 aa7.12□□□□□ -1.27
HMGXB4-208ENST00000498325 ARHGEF28Q8N1W1 1705 aaKnown RBP7.12□□□□□ -1.27
HMGXB4-208ENST00000498325 QRICH2Q9H0J4 1663 aa7.12□□□□□ -1.27
HMGXB4-208ENST00000498325 TECPR2O15040 1411 aa7.11□□□□□ -1.27
HMGXB4-208ENST00000498325 ADCY9O60503 1353 aa7.11□□□□□ -1.27
HMGXB4-208ENST00000498325 POM121CA8CG34 1229 aa7.11□□□□□ -1.27
HMGXB4-208ENST00000498325 SLC15A2Q16348 729 aa7.11□□□□□ -1.27
HMGXB4-208ENST00000498325 DTX1Q86Y01 620 aa7.11□□□□□ -1.27
HMGXB4-208ENST00000498325 ARMC10Q8N2F6 343 aa7.11□□□□□ -1.27
HMGXB4-208ENST00000498325 UTP4Q969X6 686 aaKnown RBP7.11□□□□□ -1.27
HMGXB4-208ENST00000498325 NSUN5Q96P11 429 aaKnown RBP7.11□□□□□ -1.27
HMGXB4-208ENST00000498325 PRAM1Q96QH2 718 aa7.11□□□□□ -1.27
HMGXB4-208ENST00000498325 MUC3BQ9H195 1237 aa7.11□□□□□ -1.27
HMGXB4-208ENST00000498325 MRS2Q9HD23 443 aa7.11□□□□□ -1.27
HMGXB4-208ENST00000498325 MYBBP1AQ9BQG0 1328 aaKnown RBP7.1□□□□□ -1.27
HMGXB4-208ENST00000498325 LGR5O75473 907 aa7.1□□□□□ -1.27
HMGXB4-208ENST00000498325 IGFBP4P22692 258 aa7.1□□□□□ -1.27
HMGXB4-208ENST00000498325 CNGB1Q14028 1251 aaPredicted RBP7.1□□□□□ -1.27
HMGXB4-208ENST00000498325 HDGFL1Q5TGJ6 251 aa7.1□□□□□ -1.27
HMGXB4-208ENST00000498325 RNF43Q68DV7 783 aa7.1□□□□□ -1.27
HMGXB4-208ENST00000498325 TMC1Q8TDI8 760 aa7.1□□□□□ -1.27
HMGXB4-208ENST00000498325 POM121Q96HA1 1249 aa7.1□□□□□ -1.27
HMGXB4-208ENST00000498325 C7orf69Q9H7B7 122 aa7.1□□□□□ -1.27
HMGXB4-208ENST00000498325 STK32BQ9NY57 414 aa7.1□□□□□ -1.27
HMGXB4-208ENST00000498325 USP35Q9P2H5 1018 aa7.1□□□□□ -1.27
HMGXB4-208ENST00000498325 RTCBQ9Y3I0 505 aaKnown RBP7.1□□□□□ -1.27
HMGXB4-208ENST00000498325 SBNO1A3KN83 1393 aa7.09□□□□□ -1.27
HMGXB4-208ENST00000498325 XYLBO75191 536 aa7.09□□□□□ -1.27
HMGXB4-208ENST00000498325 EGFRP00533 1210 aa7.09□□□□□ -1.27
HMGXB4-208ENST00000498325 SRPK2P78362 688 aaKnown RBP7.09□□□□□ -1.27
HMGXB4-208ENST00000498325 SAFB2Q14151 953 aaKnown RBP eCLIP7.09□□□□□ -1.27
HMGXB4-208ENST00000498325 ACAD11Q709F0 780 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms