RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 ZNF341Q9BYN7 854 aa20.32■□□□□ 0.84
ABCF3-218ENST00000498136 RFX7Q2KHR2 1363 aa20.32■□□□□ 0.84
ABCF3-218ENST00000498136 PLCG2P16885 1265 aa20.31■□□□□ 0.84
ABCF3-218ENST00000498136 SREBF2Q12772 1141 aa20.31■□□□□ 0.84
ABCF3-218ENST00000498136 VGLL4Q14135 290 aa20.31■□□□□ 0.84
ABCF3-218ENST00000498136 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.31■□□□□ 0.84
ABCF3-218ENST00000498136 ADGRA1Q86SQ6 560 aa20.31■□□□□ 0.84
ABCF3-218ENST00000498136 SH3RF3Q8TEJ3 882 aaPredicted RBP20.31■□□□□ 0.84
ABCF3-218ENST00000498136 ZBTB47Q9UFB7 747 aaPredicted RBP20.31■□□□□ 0.84
ABCF3-218ENST00000498136 TRPA1O75762 1119 aa20.3■□□□□ 0.84
ABCF3-218ENST00000498136 ZBTB48P10074 688 aaPredicted RBP20.3■□□□□ 0.84
ABCF3-218ENST00000498136 ATP5JP18859 108 aa20.3■□□□□ 0.84
ABCF3-218ENST00000498136 COL13A1Q5TAT6 717 aaPredicted RBP20.3■□□□□ 0.84
ABCF3-218ENST00000498136 OPTNQ96CV9 577 aa20.3■□□□□ 0.84
ABCF3-218ENST00000498136 GPATCH3Q96I76 525 aa20.3■□□□□ 0.84
ABCF3-218ENST00000498136 CDK5RAP2Q96SN8 1893 aa20.29■□□□□ 0.84
ABCF3-218ENST00000498136 AAMPQ13685 434 aa20.29■□□□□ 0.84
ABCF3-218ENST00000498136 MIGA1Q8NAN2 632 aa20.29■□□□□ 0.84
ABCF3-218ENST00000498136 EXOC6Q8TAG9 804 aa20.29■□□□□ 0.84
ABCF3-218ENST00000498136 ZKSCAN4Q969J2 545 aaPredicted RBP20.29■□□□□ 0.84
ABCF3-218ENST00000498136 EDC3Q96F86 508 aaKnown RBP20.29■□□□□ 0.84
ABCF3-218ENST00000498136 PAG1Q9NWQ8 432 aa20.29■□□□□ 0.84
ABCF3-218ENST00000498136 DDTLA6NHG4 134 aaPredicted RBP20.28■□□□□ 0.84
ABCF3-218ENST00000498136 MANSC4A6NHS7 340 aaPredicted RBP20.28■□□□□ 0.84
ABCF3-218ENST00000498136 PPP4CP60510 307 aa20.28■□□□□ 0.84
ABCF3-218ENST00000498136 DYNLL1P63167 89 aaKnown RBP20.28■□□□□ 0.84
ABCF3-218ENST00000498136 SH3BP5LQ7L8J4 393 aa20.28■□□□□ 0.84
ABCF3-218ENST00000498136 TGFBRAP1Q8WUH2 860 aa20.28■□□□□ 0.84
ABCF3-218ENST00000498136 OSBPL5Q9H0X9 879 aaPredicted RBP20.28■□□□□ 0.84
ABCF3-218ENST00000498136 PRDM10Q9NQV6 1147 aa20.28■□□□□ 0.84
ABCF3-218ENST00000498136 RNF186Q9NXI6 227 aa20.28■□□□□ 0.84
ABCF3-218ENST00000498136 FOCADQ5VW36 1801 aa20.27■□□□□ 0.84
ABCF3-218ENST00000498136 GJA5P36382 358 aa20.27■□□□□ 0.84
ABCF3-218ENST00000498136 SLC9C2Q5TAH2 1124 aa20.27■□□□□ 0.84
ABCF3-218ENST00000498136 OTUD5Q96G74 571 aa20.27■□□□□ 0.84
ABCF3-218ENST00000498136 HAUS7Q99871 368 aa20.27■□□□□ 0.84
ABCF3-218ENST00000498136 ECHDC1Q9NTX5 307 aa20.27■□□□□ 0.84
ABCF3-218ENST00000498136 SAGE1Q9NXZ1 904 aa20.27■□□□□ 0.84
ABCF3-218ENST00000498136 NPM3O75607 178 aaKnown RBP20.26■□□□□ 0.83
ABCF3-218ENST00000498136 INPP5BP32019 993 aa20.26■□□□□ 0.83
ABCF3-218ENST00000498136 TM4SF4P48230 202 aa20.26■□□□□ 0.83
ABCF3-218ENST00000498136 TMED8Q6PL24 325 aaPredicted RBP20.26■□□□□ 0.83
ABCF3-218ENST00000498136 MAPKAPK5Q8IW41 473 aa20.26■□□□□ 0.83
ABCF3-218ENST00000498136 CNKSR2Q8WXI2 1034 aa20.26■□□□□ 0.83
ABCF3-218ENST00000498136 SNCAIPQ9Y6H5 919 aa20.26■□□□□ 0.83
ABCF3-218ENST00000498136 MYH7P12883 1935 aa20.25■□□□□ 0.83
ABCF3-218ENST00000498136 PDE6AP16499 860 aa20.25■□□□□ 0.83
ABCF3-218ENST00000498136 INHBEP58166 350 aa20.25■□□□□ 0.83
ABCF3-218ENST00000498136 HDAC1Q13547 482 aaPredicted RBP20.25■□□□□ 0.83
ABCF3-218ENST00000498136 ANKRD45Q5TZF3 282 aa20.25■□□□□ 0.83
ABCF3-218ENST00000498136 TSHZ3Q63HK5 1081 aa20.25■□□□□ 0.83
ABCF3-218ENST00000498136 ERO1BQ86YB8 467 aa20.25■□□□□ 0.83
ABCF3-218ENST00000498136 CERS3Q8IU89 383 aa20.25■□□□□ 0.83
ABCF3-218ENST00000498136 GCC1Q96CN9 775 aa20.25■□□□□ 0.83
ABCF3-218ENST00000498136 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.25■□□□□ 0.837e-10■■■■■ 56.2
ABCF3-218ENST00000498136 LAMB1P07942 1786 aa20.25■□□□□ 0.83
ABCF3-218ENST00000498136 ZNF532Q9HCE3 1301 aa20.25■□□□□ 0.83
ABCF3-218ENST00000498136 ATRNL1Q5VV63 1379 aa20.24■□□□□ 0.83
ABCF3-218ENST00000498136 USP5P45974 858 aa20.24■□□□□ 0.83
ABCF3-218ENST00000498136 IRX6P78412 446 aaPredicted RBP20.24■□□□□ 0.83
ABCF3-218ENST00000498136 RWDD1Q9H446 243 aaPredicted RBP20.24■□□□□ 0.83
ABCF3-218ENST00000498136 ZNF112Q9UJU3 913 aa20.24■□□□□ 0.83
ABCF3-218ENST00000498136 FLT1P17948 1338 aa20.24■□□□□ 0.83
ABCF3-218ENST00000498136 COL2A1P02458 1487 aaPredicted RBP20.24■□□□□ 0.83
ABCF3-218ENST00000498136 CASP8AP2Q9UKL3 1982 aa20.23■□□□□ 0.83
ABCF3-218ENST00000498136 MAGEB6P1A0A0J9YX57 407 aa20.23■□□□□ 0.83
ABCF3-218ENST00000498136 SPDYE5A6NIY4 337 aa20.23■□□□□ 0.83
ABCF3-218ENST00000498136 SLURP2P0DP57 97 aa20.23■□□□□ 0.83
ABCF3-218ENST00000498136 TNS4Q8IZW8 715 aa20.23■□□□□ 0.83
ABCF3-218ENST00000498136 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.23■□□□□ 0.83
ABCF3-218ENST00000498136 MYH1P12882 1939 aa20.23■□□□□ 0.83
ABCF3-218ENST00000498136 FAM196BA6NMK8 535 aa20.22■□□□□ 0.83
ABCF3-218ENST00000498136 GTF2A2P52657 109 aa20.22■□□□□ 0.83
ABCF3-218ENST00000498136 IFNL1Q8IU54 200 aa20.22■□□□□ 0.83
ABCF3-218ENST00000498136 TRIM34Q9BYJ4 488 aa20.22■□□□□ 0.83
ABCF3-218ENST00000498136 DHX36Q9H2U1 1008 aaKnown RBP20.22■□□□□ 0.83
ABCF3-218ENST00000498136 SAP30BPQ9UHR5 308 aaKnown RBP20.22■□□□□ 0.83
ABCF3-218ENST00000498136 ERC2O15083 957 aa20.21■□□□□ 0.83
ABCF3-218ENST00000498136 TBC1D8O95759 1140 aa20.21■□□□□ 0.83
ABCF3-218ENST00000498136 ALDH1A1P00352 501 aa20.21■□□□□ 0.83
ABCF3-218ENST00000498136 SLC4A8Q2Y0W8 1093 aa20.21■□□□□ 0.83
ABCF3-218ENST00000498136 OTUD7BQ6GQQ9 843 aa20.21■□□□□ 0.83
ABCF3-218ENST00000498136 PICK1Q9NRD5 415 aa20.21■□□□□ 0.83
ABCF3-218ENST00000498136 DOCK1Q14185 1865 aa20.2■□□□□ 0.82
ABCF3-218ENST00000498136 CCL15-CCL14A0A0B4J2E2 113 aa20.2■□□□□ 0.82
ABCF3-218ENST00000498136 PHF20L1A8MW92 1017 aa20.2■□□□□ 0.82
ABCF3-218ENST00000498136 HLA-DOAP06340 250 aa20.2■□□□□ 0.82
ABCF3-218ENST00000498136 ADD2P35612 726 aa20.2■□□□□ 0.82
ABCF3-218ENST00000498136 PPATQ06203 517 aa20.2■□□□□ 0.82
ABCF3-218ENST00000498136 PPIL2Q13356 520 aa20.2■□□□□ 0.82
ABCF3-218ENST00000498136 CCL15Q16663 113 aa20.2■□□□□ 0.82
ABCF3-218ENST00000498136 NOL9Q5SY16 702 aaKnown RBP20.2■□□□□ 0.82
ABCF3-218ENST00000498136 ZSCAN25Q6NSZ9 544 aa20.2■□□□□ 0.82
ABCF3-218ENST00000498136 CRACR2BQ8N4Y2 399 aaPredicted RBP20.2■□□□□ 0.82
ABCF3-218ENST00000498136 OTUD7AQ8TE49 926 aaPredicted RBP20.2■□□□□ 0.82
ABCF3-218ENST00000498136 CRNKL1Q9BZJ0 848 aaKnown RBP20.2■□□□□ 0.82
ABCF3-218ENST00000498136 PI4KBQ9UBF8 816 aa20.2■□□□□ 0.82
ABCF3-218ENST00000498136 PALD1Q9ULE6 856 aa20.2■□□□□ 0.82
ABCF3-218ENST00000498136 TTC41PQ6P2S7 1318 aa20.2■□□□□ 0.82
ABCF3-218ENST00000498136 TCRBV5S4A2TA0A5A2 114 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms