RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, human

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC8-208	ENST00000497892	MROH7-TTC4	A0A0A0MT08	1334 aa		13.73	□□□□□ -0.21
ERCC8-208	ENST00000497892	CYP2E1	P05181	493 aa	Predicted RBP	13.73	□□□□□ -0.21
ERCC8-208	ENST00000497892	ZAP70	P43403	619 aa		13.73	□□□□□ -0.21
ERCC8-208	ENST00000497892	SLF2	Q8IX21	1173 aa		13.73	□□□□□ -0.21
ERCC8-208	ENST00000497892	NSUN4	Q96CB9	384 aa	Known RBP	13.73	□□□□□ -0.21
ERCC8-208	ENST00000497892	GBA2	Q9HCG7	927 aa	Predicted RBP	13.73	□□□□□ -0.21
ERCC8-208	ENST00000497892	MKRN1	Q9UHC7	482 aa	Known RBP	13.73	□□□□□ -0.21
ERCC8-208	ENST00000497892	RFX7	Q2KHR2	1363 aa		13.72	□□□□□ -0.21
ERCC8-208	ENST00000497892	PCNT	O95613	3336 aa		13.72	□□□□□ -0.21
ERCC8-208	ENST00000497892	SMARCA5	O60264	1052 aa	Predicted RBP	13.72	□□□□□ -0.21
ERCC8-208	ENST00000497892	IGSF3	O75054	1194 aa		13.72	□□□□□ -0.21
ERCC8-208	ENST00000497892	FKBP1B	P68106	108 aa		13.72	□□□□□ -0.21
ERCC8-208	ENST00000497892	RASA3	Q14644	834 aa		13.72	□□□□□ -0.21
ERCC8-208	ENST00000497892	FKBP1C	Q5VVH2	108 aa		13.72	□□□□□ -0.21
ERCC8-208	ENST00000497892	PRAMEF18	Q5VWM3	479 aa		13.72	□□□□□ -0.21
ERCC8-208	ENST00000497892	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
ERCC8-208	ENST00000497892	HHIPL1	Q96JK4	782 aa		13.72	□□□□□ -0.21
ERCC8-208	ENST00000497892	TMOD2	Q9NZR1	351 aa		13.72	□□□□□ -0.21
ERCC8-208	ENST00000497892	RAI14	Q9P0K7	980 aa		13.72	□□□□□ -0.21
ERCC8-208	ENST00000497892	LRP2BP	Q9P2M1	347 aa		13.72	□□□□□ -0.21
ERCC8-208	ENST00000497892	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.71	□□□□□ -0.21
ERCC8-208	ENST00000497892	NF2	P35240	595 aa		13.71	□□□□□ -0.21
ERCC8-208	ENST00000497892	TNNI2	P48788	182 aa		13.71	□□□□□ -0.21
ERCC8-208	ENST00000497892	CACNB3	P54284	484 aa		13.71	□□□□□ -0.21
ERCC8-208	ENST00000497892	GSTO1	P78417	241 aa		13.71	□□□□□ -0.21
ERCC8-208	ENST00000497892	MMRN1	Q13201	1228 aa		13.71	□□□□□ -0.21
ERCC8-208	ENST00000497892	GPR153	Q6NV75	609 aa		13.71	□□□□□ -0.21
ERCC8-208	ENST00000497892	CDC42EP5	Q6NZY7	148 aa		13.71	□□□□□ -0.21
ERCC8-208	ENST00000497892	C2orf69	Q8N8R5	385 aa		13.71	□□□□□ -0.21
ERCC8-208	ENST00000497892	BCL11A	Q9H165	835 aa		13.71	□□□□□ -0.21
ERCC8-208	ENST00000497892	PIH1D3	Q9NQM4	214 aa	Known RBP	13.71	□□□□□ -0.21
ERCC8-208	ENST00000497892	OTOF	Q9HC10	1997 aa		13.71	□□□□□ -0.22
ERCC8-208	ENST00000497892	CDK5RAP2	Q96SN8	1893 aa		13.7	□□□□□ -0.22
ERCC8-208	ENST00000497892	FOCAD	Q5VW36	1801 aa		13.7	□□□□□ -0.22
ERCC8-208	ENST00000497892	TCP10L2	B9ZVM9	353 aa		13.7	□□□□□ -0.22
ERCC8-208	ENST00000497892	ATP5J	P18859	108 aa		13.7	□□□□□ -0.22
ERCC8-208	ENST00000497892	HUNK	P57058	714 aa		13.7	□□□□□ -0.22
ERCC8-208	ENST00000497892	DEFB115	Q30KQ5	88 aa		13.7	□□□□□ -0.22
ERCC8-208	ENST00000497892	FAM83A	Q86UY5	434 aa		13.7	□□□□□ -0.22
ERCC8-208	ENST00000497892	GCC1	Q96CN9	775 aa		13.7	□□□□□ -0.22
ERCC8-208	ENST00000497892	TEPSIN	Q96N21	525 aa		13.7	□□□□□ -0.22
ERCC8-208	ENST00000497892	NDUFB9	Q9Y6M9	179 aa		13.7	□□□□□ -0.22
ERCC8-208	ENST00000497892	MYH7	P12883	1935 aa		13.7	□□□□□ -0.22
ERCC8-208	ENST00000497892	GPR75-ASB3	A0A0A6YYF3	556 aa		13.69	□□□□□ -0.22
ERCC8-208	ENST00000497892	LDHC	P07864	332 aa		13.69	□□□□□ -0.22
ERCC8-208	ENST00000497892	BTD	P43251	543 aa		13.69	□□□□□ -0.22
ERCC8-208	ENST00000497892	VEGFB	P49765	207 aa		13.69	□□□□□ -0.22
ERCC8-208	ENST00000497892	IRX6	P78412	446 aa	Predicted RBP	13.69	□□□□□ -0.22
ERCC8-208	ENST00000497892	HS6ST3	Q8IZP7	471 aa		13.69	□□□□□ -0.22
ERCC8-208	ENST00000497892	JMY	Q8N9B5	988 aa		13.69	□□□□□ -0.22
ERCC8-208	ENST00000497892	TMEM39B	Q9GZU3	492 aa		13.69	□□□□□ -0.22
ERCC8-208	ENST00000497892	ANTXR1	Q9H6X2	564 aa		13.69	□□□□□ -0.22
ERCC8-208	ENST00000497892	IDH1	O75874	414 aa	Known RBP	13.68	□□□□□ -0.22
ERCC8-208	ENST00000497892	ECE1	P42892	770 aa		13.68	□□□□□ -0.22
ERCC8-208	ENST00000497892	NFIA	Q12857	509 aa		13.68	□□□□□ -0.22
ERCC8-208	ENST00000497892	TTF1	Q15361	905 aa	Predicted RBP	13.68	□□□□□ -0.22
ERCC8-208	ENST00000497892	SUPT20HL1	Q3ZLR7	823 aa		13.68	□□□□□ -0.22
ERCC8-208	ENST00000497892	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.68	□□□□□ -0.22
ERCC8-208	ENST00000497892	NAA16	Q6N069	864 aa	Predicted RBP	13.68	□□□□□ -0.22
ERCC8-208	ENST00000497892	TMED8	Q6PL24	325 aa	Predicted RBP	13.68	□□□□□ -0.22
ERCC8-208	ENST00000497892	SMC5	Q8IY18	1101 aa		13.68	□□□□□ -0.22
ERCC8-208	ENST00000497892	CAPNS2	Q96L46	248 aa		13.68	□□□□□ -0.22
ERCC8-208	ENST00000497892	ECHDC1	Q9NTX5	307 aa		13.68	□□□□□ -0.22
ERCC8-208	ENST00000497892	USP40	Q9NVE5	1235 aa		13.68	□□□□□ -0.22
ERCC8-208	ENST00000497892	C2orf72	A6NCS6	295 aa		13.67	□□□□□ -0.22
ERCC8-208	ENST00000497892	WDHD1	O75717	1129 aa	Predicted RBP	13.67	□□□□□ -0.22
ERCC8-208	ENST00000497892	MAP4K4	O95819	1239 aa	Predicted RBP	13.67	□□□□□ -0.22
ERCC8-208	ENST00000497892	RHBDL3	P58872	404 aa		13.67	□□□□□ -0.22
ERCC8-208	ENST00000497892	MAP3K12	Q12852	859 aa		13.67	□□□□□ -0.22
ERCC8-208	ENST00000497892	CYP4F22	Q6NT55	531 aa		13.67	□□□□□ -0.22
ERCC8-208	ENST00000497892	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.67	□□□□□ -0.22
ERCC8-208	ENST00000497892	MOB2	Q70IA6	237 aa		13.67	□□□□□ -0.22
ERCC8-208	ENST00000497892	ADGRA1	Q86SQ6	560 aa		13.67	□□□□□ -0.22
ERCC8-208	ENST00000497892	FAM151A	Q8WW52	585 aa		13.67	□□□□□ -0.22
ERCC8-208	ENST00000497892	GPATCH3	Q96I76	525 aa		13.67	□□□□□ -0.22
ERCC8-208	ENST00000497892	DNAJC2	Q99543	621 aa	Known RBP	13.67	□□□□□ -0.22
ERCC8-208	ENST00000497892	HAUS7	Q99871	368 aa		13.67	□□□□□ -0.22
ERCC8-208	ENST00000497892	IDI2	Q9BXS1	227 aa		13.67	□□□□□ -0.22
ERCC8-208	ENST00000497892	RWDD1	Q9H446	243 aa	Predicted RBP	13.67	□□□□□ -0.22
ERCC8-208	ENST00000497892	FAM198A	Q9UFP1	575 aa		13.67	□□□□□ -0.22
ERCC8-208	ENST00000497892	LAMB1	P07942	1786 aa		13.67	□□□□□ -0.22
ERCC8-208	ENST00000497892	WDR33	Q9C0J8	1336 aa	Known RBP	13.66	□□□□□ -0.22
ERCC8-208	ENST00000497892	GOLIM4	O00461	696 aa		13.66	□□□□□ -0.22
ERCC8-208	ENST00000497892	ENTPD3	O75355	529 aa		13.66	□□□□□ -0.22
ERCC8-208	ENST00000497892	TTLL12	Q14166	644 aa	Predicted RBP	13.66	□□□□□ -0.22
ERCC8-208	ENST00000497892	MAP3K11	Q16584	847 aa		13.66	□□□□□ -0.22
ERCC8-208	ENST00000497892	RGMB	Q6NW40	437 aa		13.66	□□□□□ -0.22
ERCC8-208	ENST00000497892	ARMC9	Q7Z3E5	817 aa		13.66	□□□□□ -0.22
ERCC8-208	ENST00000497892	BOLA2	Q9H3K6	86 aa		13.66	□□□□□ -0.22
ERCC8-208	ENST00000497892	PAG1	Q9NWQ8	432 aa		13.66	□□□□□ -0.22
ERCC8-208	ENST00000497892	COL2A1	P02458	1487 aa	Predicted RBP	13.66	□□□□□ -0.22
ERCC8-208	ENST00000497892	AK9	Q5TCS8	1911 aa		13.66	□□□□□ -0.22
ERCC8-208	ENST00000497892	TTC41P	Q6P2S7	1318 aa		13.65	□□□□□ -0.22
ERCC8-208	ENST00000497892	SALL3	Q9BXA9	1300 aa		13.65	□□□□□ -0.22
ERCC8-208	ENST00000497892	UBE2Q2L	H0YL09	131 aa		13.65	□□□□□ -0.22
ERCC8-208	ENST00000497892	PPP1R12B	O60237	982 aa	Predicted RBP	13.65	□□□□□ -0.22
ERCC8-208	ENST00000497892	PPP1R37	O75864	691 aa		13.65	□□□□□ -0.22
ERCC8-208	ENST00000497892	IGHD	P01880	384 aa		13.65	□□□□□ -0.22
ERCC8-208	ENST00000497892	RGS3	P49796	1198 aa		13.65	□□□□□ -0.22
ERCC8-208	ENST00000497892	PPP4C	P60510	307 aa		13.65	□□□□□ -0.22

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