RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 E2F7Q96AV8 911 aa7.76□□□□□ -1.17
BRCA1-224ENST00000497488 CHMP4CQ96CF2 233 aa7.76□□□□□ -1.17
BRCA1-224ENST00000497488 MTMR8Q96EF0 704 aa7.76□□□□□ -1.17
BRCA1-224ENST00000497488 SEC31BQ9NQW1 1179 aa7.76□□□□□ -1.17
BRCA1-224ENST00000497488 AASDHPPTQ9NRN7 309 aa7.76□□□□□ -1.17
BRCA1-224ENST00000497488 SLC5A4Q9NY91 659 aa7.76□□□□□ -1.17
BRCA1-224ENST00000497488 NOB1Q9ULX3 412 aaKnown RBP7.76□□□□□ -1.17
BRCA1-224ENST00000497488 SIAH2O43255 324 aa7.75□□□□□ -1.17
BRCA1-224ENST00000497488 ITKQ08881 620 aa7.75□□□□□ -1.17
BRCA1-224ENST00000497488 GFOD2Q3B7J2 385 aa7.75□□□□□ -1.17
BRCA1-224ENST00000497488 TMEM95Q3KNT9 176 aa7.75□□□□□ -1.17
BRCA1-224ENST00000497488 SLC10A6Q3KNW5 377 aa7.75□□□□□ -1.17
BRCA1-224ENST00000497488 GRAMD1BQ3KR37 738 aa7.75□□□□□ -1.17
BRCA1-224ENST00000497488 INO80DQ53TQ3 878 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-224ENST00000497488 BICDL1Q6ZP65 573 aa7.75□□□□□ -1.17
BRCA1-224ENST00000497488 LRRTM3Q86VH5 581 aa7.75□□□□□ -1.17
BRCA1-224ENST00000497488 GPATCH11Q8N954 259 aa7.75□□□□□ -1.17
BRCA1-224ENST00000497488 KISS1RQ969F8 398 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-224ENST00000497488 CLUHP3Q96NS8 147 aa7.75□□□□□ -1.17
BRCA1-224ENST00000497488 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-224ENST00000497488 C11orf16Q9NQ32 467 aa7.75□□□□□ -1.17
BRCA1-224ENST00000497488 TAGLN3Q9UI15 199 aa7.75□□□□□ -1.17
BRCA1-224ENST00000497488 ANAPC4Q9UJX5 808 aa7.75□□□□□ -1.17
BRCA1-224ENST00000497488 PCDHB14Q9Y5E9 798 aa7.75□□□□□ -1.17
BRCA1-224ENST00000497488 IQCA1LA6NCM1 817 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 PRPF3O43395 683 aaKnown RBP7.74□□□□□ -1.17
BRCA1-224ENST00000497488 F2P00734 622 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 L1CAMP32004 1257 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 CCNFP41002 786 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 GRIA4P48058 902 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 PURAQ00577 322 aaKnown RBP7.74□□□□□ -1.17
BRCA1-224ENST00000497488 TYRO3Q06418 890 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 NCAPHQ15003 741 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 ACBD5Q5T8D3 534 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-224ENST00000497488 FOXB2Q5VYV0 432 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 CNNM4Q6P4Q7 775 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 LHFPL2Q6ZUX7 228 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 Q6ZVU0 165 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 ZBTB46Q86UZ6 589 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 SPICE1Q8N0Z3 855 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 WDR66Q8TBY9 1149 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 CNTNAP3BQ96NU0 1288 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 ZKSCAN3Q9BRR0 538 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 YIPF4Q9BSR8 244 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 MTA3Q9BTC8 594 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 CNTNAP3Q9BZ76 1288 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 GRIP2Q9C0E4 1043 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 CCDC8Q9H0W5 538 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-224ENST00000497488 EPN3Q9H201 632 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 INTS7Q9NVH2 962 aaKnown RBP7.74□□□□□ -1.17
BRCA1-224ENST00000497488 MAP3K20Q9NYL2 800 aaKnown RBP7.74□□□□□ -1.17
BRCA1-224ENST00000497488 ZNF180Q9UJW8 692 aa7.74□□□□□ -1.17
BRCA1-224ENST00000497488 BICRAQ9NZM4 1560 aa7.73□□□□□ -1.17
BRCA1-224ENST00000497488 TBX3O15119 743 aa7.73□□□□□ -1.17
BRCA1-224ENST00000497488 RFPL1O75677 317 aa7.73□□□□□ -1.17
BRCA1-224ENST00000497488 ATE1O95260 518 aa7.73□□□□□ -1.17
BRCA1-224ENST00000497488 GUCY2CP25092 1073 aa7.73□□□□□ -1.17
BRCA1-224ENST00000497488 GGCXP38435 758 aa7.73□□□□□ -1.17
BRCA1-224ENST00000497488 PLA2G2CQ5R387 149 aa7.73□□□□□ -1.17
BRCA1-224ENST00000497488 RASIP1Q5U651 963 aa7.73□□□□□ -1.17
BRCA1-224ENST00000497488 RNF219Q5W0B1 726 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-224ENST00000497488 DIEXFQ68CQ4 756 aaKnown RBP7.73□□□□□ -1.17
BRCA1-224ENST00000497488 LRRC69Q6ZNQ3 347 aa7.73□□□□□ -1.17
BRCA1-224ENST00000497488 FAM9BQ8IZU0 186 aa7.73□□□□□ -1.17
BRCA1-224ENST00000497488 EXOC2Q96KP1 924 aa7.73□□□□□ -1.17
BRCA1-224ENST00000497488 AGBL1Q96MI9 1066 aa7.73□□□□□ -1.17
BRCA1-224ENST00000497488 TM9SF2Q99805 663 aa7.73□□□□□ -1.17
BRCA1-224ENST00000497488 PPCSQ9HAB8 311 aa7.73□□□□□ -1.17
BRCA1-224ENST00000497488 PTPRHQ9HD43 1115 aa7.73□□□□□ -1.17
BRCA1-224ENST00000497488 PHF20L1A8MW92 1017 aa7.72□□□□□ -1.17
BRCA1-224ENST00000497488 NPHP1O15259 732 aa7.72□□□□□ -1.17
BRCA1-224ENST00000497488 GPR39O43194 453 aa7.72□□□□□ -1.17
BRCA1-224ENST00000497488 SUSD5O60279 629 aa7.72□□□□□ -1.17
BRCA1-224ENST00000497488 IFIT2P09913 472 aaKnown RBP7.72□□□□□ -1.17
BRCA1-224ENST00000497488 ARAFP10398 606 aa7.72□□□□□ -1.17
BRCA1-224ENST00000497488 SDSP20132 328 aa7.72□□□□□ -1.17
BRCA1-224ENST00000497488 ATP4AP20648 1035 aa7.72□□□□□ -1.17
BRCA1-224ENST00000497488 STRN3Q13033 797 aa7.72□□□□□ -1.17
BRCA1-224ENST00000497488 RPS26P11Q5JNZ5 115 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-224ENST00000497488 PPM1KQ8N3J5 372 aa7.72□□□□□ -1.17
BRCA1-224ENST00000497488 OR13H1Q8NG92 308 aa7.72□□□□□ -1.17
BRCA1-224ENST00000497488 LEO1Q8WVC0 666 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-224ENST00000497488 DDX1Q92499 740 aaKnown RBP7.72□□□□□ -1.17
BRCA1-224ENST00000497488 MRPS23Q9Y3D9 190 aaKnown RBP7.72□□□□□ -1.17
BRCA1-224ENST00000497488 FAM83GA6ND36 823 aa7.71□□□□□ -1.18
BRCA1-224ENST00000497488 MEIS3P2A8K0S8 358 aa7.71□□□□□ -1.18
BRCA1-224ENST00000497488 ABLIM3O94929 683 aa7.71□□□□□ -1.18
BRCA1-224ENST00000497488 TRIM27P14373 513 aa7.71□□□□□ -1.18
BRCA1-224ENST00000497488 GPC1P35052 558 aa7.71□□□□□ -1.18
BRCA1-224ENST00000497488 FAAP100Q0VG06 881 aa7.71□□□□□ -1.18
BRCA1-224ENST00000497488 SPRED3Q2MJR0 410 aa7.71□□□□□ -1.18
BRCA1-224ENST00000497488 SLC27A3Q5K4L6 730 aa7.71□□□□□ -1.18
BRCA1-224ENST00000497488 VHLLQ6RSH7 139 aa7.71□□□□□ -1.18
BRCA1-224ENST00000497488 PODNQ7Z5L7 613 aa7.71□□□□□ -1.18
BRCA1-224ENST00000497488 PAF1Q8N7H5 531 aa7.71□□□□□ -1.18
BRCA1-224ENST00000497488 ANKLE1Q8NAG6 615 aa7.71□□□□□ -1.18
BRCA1-224ENST00000497488 MYRIPQ8NFW9 859 aa7.71□□□□□ -1.18
BRCA1-224ENST00000497488 ZIC5Q96T25 663 aa7.71□□□□□ -1.18
BRCA1-224ENST00000497488 OSMRQ99650 979 aa7.71□□□□□ -1.18
BRCA1-224ENST00000497488 DHRS4Q9BTZ2 278 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms