RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 FKBP5Q13451 457 aaPredicted RBP13.25□□□□□ -0.29
TOM1-217ENST00000497448 GADL1Q6ZQY3 521 aa13.25□□□□□ -0.29
TOM1-217ENST00000497448 FASTKD5Q7L8L6 764 aaKnown RBP13.25□□□□□ -0.29
TOM1-217ENST00000497448 COA7Q96BR5 231 aa13.25□□□□□ -0.29
TOM1-217ENST00000497448 APAF1O14727 1248 aa13.24□□□□□ -0.29
TOM1-217ENST00000497448 SLC4A2P04920 1241 aa13.24□□□□□ -0.29
TOM1-217ENST00000497448 COL9A1P20849 921 aa13.24□□□□□ -0.29
TOM1-217ENST00000497448 MDM2Q00987 491 aaPredicted RBP13.24□□□□□ -0.29
TOM1-217ENST00000497448 TCP10Q12799 353 aa13.24□□□□□ -0.29
TOM1-217ENST00000497448 FBXO33Q7Z6M2 555 aa13.24□□□□□ -0.29
TOM1-217ENST00000497448 VPS37DQ86XT2 251 aa13.24□□□□□ -0.29
TOM1-217ENST00000497448 ANKRD13CQ8N6S4 541 aa13.24□□□□□ -0.29
TOM1-217ENST00000497448 TSR2Q969E8 191 aaKnown RBP13.24□□□□□ -0.29
TOM1-217ENST00000497448 MRIQ9BWK5 157 aa13.24□□□□□ -0.29
TOM1-217ENST00000497448 PUS3Q9BZE2 481 aaKnown RBP13.24□□□□□ -0.29
TOM1-217ENST00000497448 HMX1Q9NP08 348 aaPredicted RBP13.24□□□□□ -0.29
TOM1-217ENST00000497448 OGDHLQ9ULD0 1010 aa13.24□□□□□ -0.29
TOM1-217ENST00000497448 NFIAQ12857 509 aa13.23□□□□□ -0.29
TOM1-217ENST00000497448 FAM110CQ1W6H9 321 aa13.23□□□□□ -0.29
TOM1-217ENST00000497448 ZNF697Q5TEC3 545 aa13.23□□□□□ -0.29
TOM1-217ENST00000497448 HHIPL2Q6UWX4 724 aa13.23□□□□□ -0.29
TOM1-217ENST00000497448 SCYL3Q8IZE3 742 aa13.23□□□□□ -0.29
TOM1-217ENST00000497448 MAFAQ8NHW3 353 aaPredicted RBP13.23□□□□□ -0.29
TOM1-217ENST00000497448 ZHX2Q9Y6X8 837 aa13.23□□□□□ -0.29
TOM1-217ENST00000497448 FRAT2O75474 233 aaPredicted RBP13.22□□□□□ -0.29
TOM1-217ENST00000497448 PTPRAP18433 802 aa13.22□□□□□ -0.29
TOM1-217ENST00000497448 TWISTNBQ3B726 338 aaPredicted RBP13.22□□□□□ -0.29
TOM1-217ENST00000497448 DIEXFQ68CQ4 756 aaKnown RBP13.22□□□□□ -0.29
TOM1-217ENST00000497448 CDX2Q99626 313 aaPredicted RBP13.22□□□□□ -0.29
TOM1-217ENST00000497448 SUGT1Q9Y2Z0 365 aa13.22□□□□□ -0.29
TOM1-217ENST00000497448 AFG3L2Q9Y4W6 797 aa13.22□□□□□ -0.29
TOM1-217ENST00000497448 ATAD5Q96QE3 1844 aa13.21□□□□□ -0.29
TOM1-217ENST00000497448 PHF20L1A8MW92 1017 aa13.21□□□□□ -0.29
TOM1-217ENST00000497448 COL6A1P12109 1028 aa13.21□□□□□ -0.29
TOM1-217ENST00000497448 DDX10Q13206 875 aaKnown RBP13.21□□□□□ -0.29
TOM1-217ENST00000497448 LRRC26Q2I0M4 334 aa13.21□□□□□ -0.29
TOM1-217ENST00000497448 CDC42EP5Q6NZY7 148 aa13.21□□□□□ -0.29
TOM1-217ENST00000497448 TRIB2Q92519 343 aa13.21□□□□□ -0.29
TOM1-217ENST00000497448 FAM198AQ9UFP1 575 aa13.21□□□□□ -0.29
TOM1-217ENST00000497448 AGTPBP1Q9UPW5 1226 aa13.21□□□□□ -0.29
TOM1-217ENST00000497448 DAGLAQ9Y4D2 1042 aa13.21□□□□□ -0.29
TOM1-217ENST00000497448 TTC28Q96AY4 2481 aa13.2□□□□□ -0.3
TOM1-217ENST00000497448 MROH5Q6ZUA9 1318 aa13.2□□□□□ -0.3
TOM1-217ENST00000497448 CAVIN4Q5BKX8 364 aa13.2□□□□□ -0.3
TOM1-217ENST00000497448 TREML2Q5T2D2 321 aa13.2□□□□□ -0.3
TOM1-217ENST00000497448 BEND3Q5T5X7 828 aa13.2□□□□□ -0.3
TOM1-217ENST00000497448 PICK1Q9NRD5 415 aa13.2□□□□□ -0.3
TOM1-217ENST00000497448 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.2□□□□□ -0.3
TOM1-217ENST00000497448 RAPGEFL1Q9UHV5 662 aa13.2□□□□□ -0.3
TOM1-217ENST00000497448 TRIM75PA6NK02 468 aa13.19□□□□□ -0.3
TOM1-217ENST00000497448 F6X3S4 739 aa13.19□□□□□ -0.3
TOM1-217ENST00000497448 GRM8O00222 908 aa13.19□□□□□ -0.3
TOM1-217ENST00000497448 DIXDC1Q155Q3 683 aa13.19□□□□□ -0.3
TOM1-217ENST00000497448 MAP3K21Q5TCX8 1036 aa13.19□□□□□ -0.3
TOM1-217ENST00000497448 ZFPM1Q8IX07 1006 aa13.19□□□□□ -0.3
TOM1-217ENST00000497448 GJD2Q9UKL4 321 aa13.19□□□□□ -0.3
TOM1-217ENST00000497448 PNMA3Q9UL41 463 aa13.19□□□□□ -0.3
TOM1-217ENST00000497448 RFX7Q2KHR2 1363 aa13.19□□□□□ -0.3
TOM1-217ENST00000497448 PRKAR2AP13861 404 aaKnown RBP13.18□□□□□ -0.3
TOM1-217ENST00000497448 CCDC84Q86UT8 332 aaPredicted RBP13.18□□□□□ -0.3
TOM1-217ENST00000497448 VGLL2Q8N8G2 317 aa13.18□□□□□ -0.3
TOM1-217ENST00000497448 MYLIPQ8WY64 445 aa13.18□□□□□ -0.3
TOM1-217ENST00000497448 SYMPKQ92797 1274 aaKnown RBP13.18□□□□□ -0.3
TOM1-217ENST00000497448 MYH2Q9UKX2 1941 aa13.17□□□□□ -0.3
TOM1-217ENST00000497448 SLURP2P0DP57 97 aa13.17□□□□□ -0.3
TOM1-217ENST00000497448 KIF16BQ96L93 1317 aa13.16□□□□□ -0.3
TOM1-217ENST00000497448 LRRC24Q50LG9 513 aa13.16□□□□□ -0.3
TOM1-217ENST00000497448 METTL24Q5JXM2 366 aa13.16□□□□□ -0.3
TOM1-217ENST00000497448 KAZALD1Q96I82 304 aa13.16□□□□□ -0.3
TOM1-217ENST00000497448 SUCLG2Q96I99 432 aa13.16□□□□□ -0.3
TOM1-217ENST00000497448 TTYH1Q9H313 450 aaPredicted RBP13.16□□□□□ -0.3
TOM1-217ENST00000497448 SEMA6BQ9H3T3 888 aa13.16□□□□□ -0.3
TOM1-217ENST00000497448 PDE8BO95263 885 aa13.15□□□□□ -0.3
TOM1-217ENST00000497448 CYP2B6P20813 491 aa13.15□□□□□ -0.3
TOM1-217ENST00000497448 PRDX5P30044 214 aa13.15□□□□□ -0.3
TOM1-217ENST00000497448 PLA2G5P39877 138 aa13.15□□□□□ -0.3
TOM1-217ENST00000497448 GCLCP48506 637 aaPredicted RBP13.15□□□□□ -0.3
TOM1-217ENST00000497448 RGS3P49796 1198 aa13.15□□□□□ -0.3
TOM1-217ENST00000497448 SH3BP5LQ7L8J4 393 aa13.15□□□□□ -0.3
TOM1-217ENST00000497448 PROCA1Q8NCQ7 364 aaPredicted RBP13.15□□□□□ -0.3
TOM1-217ENST00000497448 LBHD1Q9BQE6 289 aaPredicted RBP13.15□□□□□ -0.3
TOM1-217ENST00000497448 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
TOM1-217ENST00000497448 USP40Q9NVE5 1235 aa13.15□□□□□ -0.3
TOM1-217ENST00000497448 LRRFIP2Q9Y608 721 aaKnown RBP13.15□□□□□ -0.3
TOM1-217ENST00000497448 TNFRSF10AO00220 468 aa13.14□□□□□ -0.31
TOM1-217ENST00000497448 CTNND1O60716 968 aaKnown RBP13.14□□□□□ -0.31
TOM1-217ENST00000497448 FOSL2P15408 326 aa13.14□□□□□ -0.31
TOM1-217ENST00000497448 MAP3K10Q02779 954 aa13.14□□□□□ -0.31
TOM1-217ENST00000497448 LHX8Q68G74 356 aa13.14□□□□□ -0.31
TOM1-217ENST00000497448 WDR66Q8TBY9 1149 aa13.14□□□□□ -0.31
TOM1-217ENST00000497448 C9orf78Q9NZ63 289 aaPredicted RBP13.14□□□□□ -0.31
TOM1-217ENST00000497448 RLFQ13129 1914 aa13.13□□□□□ -0.31
TOM1-217ENST00000497448 ENTPD3O75355 529 aa13.13□□□□□ -0.31
TOM1-217ENST00000497448 ZKSCAN1P17029 563 aaPredicted RBP13.13□□□□□ -0.31
TOM1-217ENST00000497448 FGFR2P21802 821 aa13.13□□□□□ -0.31
TOM1-217ENST00000497448 CCND3P30281 292 aaPredicted RBP13.13□□□□□ -0.31
TOM1-217ENST00000497448 CACNB2Q08289 660 aaPredicted RBP13.13□□□□□ -0.31
TOM1-217ENST00000497448 TJAP1Q5JTD0 557 aa13.13□□□□□ -0.31
TOM1-217ENST00000497448 SOCS4Q8WXH5 440 aa13.13□□□□□ -0.31
TOM1-217ENST00000497448 IDI2Q9BXS1 227 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms