RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 DDTLA6NHG4 134 aaPredicted RBP13.35□□□□□ -0.27
SHROOM3-210ENST00000497440 IGF2BP3O00425 579 aaKnown RBP eCLIP13.35□□□□□ -0.27
SHROOM3-210ENST00000497440 ALDH1A1P00352 501 aa13.35□□□□□ -0.27
SHROOM3-210ENST00000497440 TCP10Q12799 353 aa13.35□□□□□ -0.27
SHROOM3-210ENST00000497440 ADGRA1Q86SQ6 560 aa13.35□□□□□ -0.27
SHROOM3-210ENST00000497440 ERO1BQ86YB8 467 aa13.35□□□□□ -0.27
SHROOM3-210ENST00000497440 IFNL1Q8IU54 200 aa13.35□□□□□ -0.27
SHROOM3-210ENST00000497440 CNKSR2Q8WXI2 1034 aa13.35□□□□□ -0.27
SHROOM3-210ENST00000497440 OPTNQ96CV9 577 aa13.35□□□□□ -0.27
SHROOM3-210ENST00000497440 ZNF341Q9BYN7 854 aa13.35□□□□□ -0.27
SHROOM3-210ENST00000497440 R3HDMLQ9H3Y0 253 aa13.35□□□□□ -0.27
SHROOM3-210ENST00000497440 IL1RAPL2Q9NP60 686 aa13.35□□□□□ -0.27
SHROOM3-210ENST00000497440 RRP1P56182 461 aaKnown RBP13.34□□□□□ -0.27
SHROOM3-210ENST00000497440 PPATQ06203 517 aa13.34□□□□□ -0.27
SHROOM3-210ENST00000497440 AACSQ86V21 672 aa13.34□□□□□ -0.27
SHROOM3-210ENST00000497440 CLASRPQ8N2M8 674 aaKnown RBP13.34□□□□□ -0.27
SHROOM3-210ENST00000497440 ZKSCAN4Q969J2 545 aaPredicted RBP13.34□□□□□ -0.27
SHROOM3-210ENST00000497440 LRP2BPQ9P2M1 347 aa13.34□□□□□ -0.27
SHROOM3-210ENST00000497440 KCNH4Q9UQ05 1017 aa13.34□□□□□ -0.27
SHROOM3-210ENST00000497440 INPP5BP32019 993 aa13.33□□□□□ -0.28
SHROOM3-210ENST00000497440 PPIL2Q13356 520 aa13.33□□□□□ -0.28
SHROOM3-210ENST00000497440 MOGSQ13724 837 aa13.33□□□□□ -0.28
SHROOM3-210ENST00000497440 MIGA2Q7L4E1 593 aa13.33□□□□□ -0.28
SHROOM3-210ENST00000497440 BRI3BPQ8WY22 251 aa13.33□□□□□ -0.28
SHROOM3-210ENST00000497440 WRNIP1Q96S55 665 aa13.33□□□□□ -0.28
SHROOM3-210ENST00000497440 ANTXR1Q9H6X2 564 aa13.33□□□□□ -0.28
SHROOM3-210ENST00000497440 ELP3Q9H9T3 547 aa13.33□□□□□ -0.28
SHROOM3-210ENST00000497440 ZCCHC17Q9NP64 241 aaKnown RBP13.33□□□□□ -0.28
SHROOM3-210ENST00000497440 RAI14Q9P0K7 980 aa13.33□□□□□ -0.28
SHROOM3-210ENST00000497440 PCDHB15Q9Y5E8 787 aa13.33□□□□□ -0.28
SHROOM3-210ENST00000497440 DOCK2Q92608 1830 aa13.33□□□□□ -0.28
SHROOM3-210ENST00000497440 GPR25O00155 361 aa13.32□□□□□ -0.28
SHROOM3-210ENST00000497440 IRF6O14896 467 aa13.32□□□□□ -0.28
SHROOM3-210ENST00000497440 ATP5JP18859 108 aa13.32□□□□□ -0.28
SHROOM3-210ENST00000497440 MKRN3Q13064 507 aaKnown RBP13.32□□□□□ -0.28
SHROOM3-210ENST00000497440 NAA16Q6N069 864 aaPredicted RBP13.32□□□□□ -0.28
SHROOM3-210ENST00000497440 OSBPL5Q9H0X9 879 aaPredicted RBP13.32□□□□□ -0.28
SHROOM3-210ENST00000497440 CSADQ9Y600 493 aa13.32□□□□□ -0.28
SHROOM3-210ENST00000497440 MAST2Q6P0Q8 1798 aa13.31□□□□□ -0.28
SHROOM3-210ENST00000497440 TBC1D8O95759 1140 aa13.31□□□□□ -0.28
SHROOM3-210ENST00000497440 BAG3O95817 575 aa13.31□□□□□ -0.28
SHROOM3-210ENST00000497440 GTF2A2P52657 109 aa13.31□□□□□ -0.28
SHROOM3-210ENST00000497440 CERS3Q8IU89 383 aa13.31□□□□□ -0.28
SHROOM3-210ENST00000497440 SH3RF3Q8TEJ3 882 aaPredicted RBP13.31□□□□□ -0.28
SHROOM3-210ENST00000497440 ZNF296Q8WUU4 475 aaPredicted RBP13.31□□□□□ -0.28
SHROOM3-210ENST00000497440 RIOK1Q9BRS2 568 aaKnown RBP13.31□□□□□ -0.28
SHROOM3-210ENST00000497440 FOCADQ5VW36 1801 aa13.3□□□□□ -0.28
SHROOM3-210ENST00000497440 CDK5RAP2Q96SN8 1893 aa13.3□□□□□ -0.28
SHROOM3-210ENST00000497440 TCRBV5S4A2TA0A5A2 114 aa13.3□□□□□ -0.28
SHROOM3-210ENST00000497440 CXCL11O14625 94 aa13.3□□□□□ -0.28
SHROOM3-210ENST00000497440 CTNND1O60716 968 aaKnown RBP13.3□□□□□ -0.28
SHROOM3-210ENST00000497440 SLURP2P0DP57 97 aa13.3□□□□□ -0.28
SHROOM3-210ENST00000497440 PLCG2P16885 1265 aa13.3□□□□□ -0.28
SHROOM3-210ENST00000497440 ABHD8Q96I13 439 aa13.3□□□□□ -0.28
SHROOM3-210ENST00000497440 LRRCC1Q9C099 1032 aa13.3□□□□□ -0.28
SHROOM3-210ENST00000497440 DHX36Q9H2U1 1008 aaKnown RBP13.3□□□□□ -0.28
SHROOM3-210ENST00000497440 AATFQ9NY61 560 aaKnown RBP eCLIP13.3□□□□□ -0.28
SHROOM3-210ENST00000497440 NDUFB9Q9Y6M9 179 aa13.3□□□□□ -0.28
SHROOM3-210ENST00000497440 MKI67P46013 3256 aaKnown RBP13.3□□□□□ -0.28
SHROOM3-210ENST00000497440 AK9Q5TCS8 1911 aa13.29□□□□□ -0.28
SHROOM3-210ENST00000497440 AAMPQ13685 434 aa13.29□□□□□ -0.28
SHROOM3-210ENST00000497440 RRP1BQ14684 758 aaKnown RBP13.29□□□□□ -0.28
SHROOM3-210ENST00000497440 TTF1Q15361 905 aaPredicted RBP13.29□□□□□ -0.28
SHROOM3-210ENST00000497440 FOXP4Q8IVH2 680 aaPredicted RBP13.29□□□□□ -0.28
SHROOM3-210ENST00000497440 FAM43AQ8N2R8 423 aa13.29□□□□□ -0.28
SHROOM3-210ENST00000497440 HAUS7Q99871 368 aa13.29□□□□□ -0.28
SHROOM3-210ENST00000497440 MCOLN1Q9GZU1 580 aa13.29□□□□□ -0.28
SHROOM3-210ENST00000497440 PI4KBQ9UBF8 816 aa13.29□□□□□ -0.28
SHROOM3-210ENST00000497440 HERC5Q9UII4 1024 aaKnown RBP13.29□□□□□ -0.28
SHROOM3-210ENST00000497440 AFG3L2Q9Y4W6 797 aa13.29□□□□□ -0.28
SHROOM3-210ENST00000497440 SIPA1L1O43166 1804 aa13.29□□□□□ -0.28
SHROOM3-210ENST00000497440 PHIPQ8WWQ0 1821 aa13.28□□□□□ -0.28
SHROOM3-210ENST00000497440 CCL15-CCL14A0A0B4J2E2 113 aa13.28□□□□□ -0.28
SHROOM3-210ENST00000497440 IFIT2P09913 472 aaKnown RBP13.28□□□□□ -0.28
SHROOM3-210ENST00000497440 CETPP11597 493 aa13.28□□□□□ -0.28
SHROOM3-210ENST00000497440 PTPRAP18433 802 aa13.28□□□□□ -0.28
SHROOM3-210ENST00000497440 CYP7A1P22680 504 aa13.28□□□□□ -0.28
SHROOM3-210ENST00000497440 MAP3K12Q12852 859 aa13.28□□□□□ -0.28
SHROOM3-210ENST00000497440 CRHR2Q13324 411 aa13.28□□□□□ -0.28
SHROOM3-210ENST00000497440 SNAPC2Q13487 334 aa13.28□□□□□ -0.28
SHROOM3-210ENST00000497440 CCL15Q16663 113 aa13.28□□□□□ -0.28
SHROOM3-210ENST00000497440 OTUD7BQ6GQQ9 843 aa13.28□□□□□ -0.28
SHROOM3-210ENST00000497440 CTU1Q7Z7A3 348 aaKnown RBP13.28□□□□□ -0.28
SHROOM3-210ENST00000497440 TEX11Q8IYF3 940 aa13.28□□□□□ -0.28
SHROOM3-210ENST00000497440 SCYL3Q8IZE3 742 aa13.28□□□□□ -0.28
SHROOM3-210ENST00000497440 OTUD5Q96G74 571 aa13.28□□□□□ -0.28
SHROOM3-210ENST00000497440 DNAJC18Q9H819 358 aa13.28□□□□□ -0.28
SHROOM3-210ENST00000497440 FLT1P17948 1338 aa13.28□□□□□ -0.28
SHROOM3-210ENST00000497440 BTBD19C9JJ37 291 aa13.27□□□□□ -0.29
SHROOM3-210ENST00000497440 IDH1O75874 414 aaKnown RBP13.27□□□□□ -0.29
SHROOM3-210ENST00000497440 RGS19P49795 217 aa13.27□□□□□ -0.29
SHROOM3-210ENST00000497440 DYNLL1P63167 89 aaKnown RBP13.27□□□□□ -0.29
SHROOM3-210ENST00000497440 CAP1Q01518 475 aa13.27□□□□□ -0.29
SHROOM3-210ENST00000497440 PICALMQ13492 652 aa13.27□□□□□ -0.29
SHROOM3-210ENST00000497440 PKN2Q16513 984 aaKnown RBP13.27□□□□□ -0.29
SHROOM3-210ENST00000497440 GPAT2Q6NUI2 795 aa13.27□□□□□ -0.29
SHROOM3-210ENST00000497440 MAGEB6Q8N7X4 407 aa13.27□□□□□ -0.29
SHROOM3-210ENST00000497440 TGFBRAP1Q8WUH2 860 aa13.27□□□□□ -0.29
SHROOM3-210ENST00000497440 A0A0G2JLL6 359 aaPredicted RBP13.26□□□□□ -0.29
SHROOM3-210ENST00000497440 FKTNO75072 461 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms