RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, human

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-B-254	ENST00000497377	MAP3K12	Q12852	859 aa		13.95	□□□□□ -0.18
HLA-B-254	ENST00000497377	TTLL12	Q14166	644 aa	Predicted RBP	13.95	□□□□□ -0.18
HLA-B-254	ENST00000497377	NAA16	Q6N069	864 aa	Predicted RBP	13.95	□□□□□ -0.18
HLA-B-254	ENST00000497377	RGMB	Q6NW40	437 aa		13.95	□□□□□ -0.18
HLA-B-254	ENST00000497377	POTEG	Q6S5H5	508 aa		13.95	□□□□□ -0.18
HLA-B-254	ENST00000497377	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.95	□□□□□ -0.18
HLA-B-254	ENST00000497377	CERS3	Q8IU89	383 aa		13.95	□□□□□ -0.18
HLA-B-254	ENST00000497377	EXOC6	Q8TAG9	804 aa		13.95	□□□□□ -0.18
HLA-B-254	ENST00000497377	CCDC102A	Q96A19	550 aa		13.95	□□□□□ -0.18
HLA-B-254	ENST00000497377	NOL10	Q9BSC4	688 aa	Known RBP	13.95	□□□□□ -0.18
HLA-B-254	ENST00000497377	RWDD1	Q9H446	243 aa	Predicted RBP	13.95	□□□□□ -0.18
HLA-B-254	ENST00000497377	SMARCA5	O60264	1052 aa	Predicted RBP	13.94	□□□□□ -0.18
HLA-B-254	ENST00000497377	BAG3	O95817	575 aa		13.94	□□□□□ -0.18
HLA-B-254	ENST00000497377	MAP2K2	P36507	400 aa		13.94	□□□□□ -0.18
HLA-B-254	ENST00000497377	BTD	P43251	543 aa		13.94	□□□□□ -0.18
HLA-B-254	ENST00000497377	PSEN1	P49768	467 aa		13.94	□□□□□ -0.18
HLA-B-254	ENST00000497377	CACNB3	P54284	484 aa		13.94	□□□□□ -0.18
HLA-B-254	ENST00000497377	MKRN3	Q13064	507 aa	Known RBP	13.94	□□□□□ -0.18
HLA-B-254	ENST00000497377	MAP3K11	Q16584	847 aa		13.94	□□□□□ -0.18
HLA-B-254	ENST00000497377	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.94	□□□□□ -0.18
HLA-B-254	ENST00000497377	CYP4F22	Q6NT55	531 aa		13.94	□□□□□ -0.18
HLA-B-254	ENST00000497377	ZNF384	Q8TF68	577 aa		13.94	□□□□□ -0.18
HLA-B-254	ENST00000497377	FAM151A	Q8WW52	585 aa		13.94	□□□□□ -0.18
HLA-B-254	ENST00000497377	TEPSIN	Q96N21	525 aa		13.94	□□□□□ -0.18
HLA-B-254	ENST00000497377	IDI2	Q9BXS1	227 aa		13.94	□□□□□ -0.18
HLA-B-254	ENST00000497377	TMEM39B	Q9GZU3	492 aa		13.94	□□□□□ -0.18
HLA-B-254	ENST00000497377	PIH1D3	Q9NQM4	214 aa	Known RBP	13.94	□□□□□ -0.18
HLA-B-254	ENST00000497377	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.94	□□□□□ -0.18
HLA-B-254	ENST00000497377	THSD7B	Q9C0I4	1608 aa		13.93	□□□□□ -0.18
HLA-B-254	ENST00000497377	SSC5D	A1L4H1	1573 aa		13.93	□□□□□ -0.18
HLA-B-254	ENST00000497377	ENTPD3	O75355	529 aa		13.93	□□□□□ -0.18
HLA-B-254	ENST00000497377	IDH1	O75874	414 aa	Known RBP	13.93	□□□□□ -0.18
HLA-B-254	ENST00000497377	ZNF157	P51786	506 aa	Predicted RBP	13.93	□□□□□ -0.18
HLA-B-254	ENST00000497377	NOG	Q13253	232 aa		13.93	□□□□□ -0.18
HLA-B-254	ENST00000497377	HAUS7	Q99871	368 aa		13.93	□□□□□ -0.18
HLA-B-254	ENST00000497377	BCL11A	Q9H165	835 aa		13.93	□□□□□ -0.18
HLA-B-254	ENST00000497377	ECHDC1	Q9NTX5	307 aa		13.93	□□□□□ -0.18
HLA-B-254	ENST00000497377	UBE2Q2L	H0YL09	131 aa		13.92	□□□□□ -0.18
HLA-B-254	ENST00000497377	IREB2	P48200	963 aa	Known RBP	13.92	□□□□□ -0.18
HLA-B-254	ENST00000497377	RHBDL3	P58872	404 aa		13.92	□□□□□ -0.18
HLA-B-254	ENST00000497377	PPP4C	P60510	307 aa		13.92	□□□□□ -0.18
HLA-B-254	ENST00000497377	LDLRAD1	Q5T700	205 aa		13.92	□□□□□ -0.18
HLA-B-254	ENST00000497377	DNAJC2	Q99543	621 aa	Known RBP	13.92	□□□□□ -0.18
HLA-B-254	ENST00000497377	ANGEL1	Q9UNK9	670 aa	Known RBP	13.92	□□□□□ -0.18
HLA-B-254	ENST00000497377	RFX7	Q2KHR2	1363 aa		13.92	□□□□□ -0.18
HLA-B-254	ENST00000497377	AK9	Q5TCS8	1911 aa		13.92	□□□□□ -0.18
HLA-B-254	ENST00000497377	TTC41P	Q6P2S7	1318 aa		13.91	□□□□□ -0.18
HLA-B-254	ENST00000497377	GOLIM4	O00461	696 aa		13.91	□□□□□ -0.18
HLA-B-254	ENST00000497377	SLC10A3	P09131	477 aa		13.91	□□□□□ -0.18
HLA-B-254	ENST00000497377	CYP7A1	P22680	504 aa		13.91	□□□□□ -0.18
HLA-B-254	ENST00000497377	MAP2K1	Q02750	393 aa	Predicted RBP	13.91	□□□□□ -0.18
HLA-B-254	ENST00000497377	NFIA	Q12857	509 aa		13.91	□□□□□ -0.18
HLA-B-254	ENST00000497377	ANKRD45	Q5TZF3	282 aa		13.91	□□□□□ -0.18
HLA-B-254	ENST00000497377	DCAF15	Q66K64	600 aa		13.91	□□□□□ -0.18
HLA-B-254	ENST00000497377	MOB2	Q70IA6	237 aa		13.91	□□□□□ -0.18
HLA-B-254	ENST00000497377	SLAIN1	Q8ND83	568 aa		13.91	□□□□□ -0.18
HLA-B-254	ENST00000497377	BOLA2	Q9H3K6	86 aa		13.91	□□□□□ -0.18
HLA-B-254	ENST00000497377	ANTXR1	Q9H6X2	564 aa		13.91	□□□□□ -0.18
HLA-B-254	ENST00000497377	PAG1	Q9NWQ8	432 aa		13.91	□□□□□ -0.18
HLA-B-254	ENST00000497377	FAM198A	Q9UFP1	575 aa		13.91	□□□□□ -0.18
HLA-B-254	ENST00000497377	PCNT	O95613	3336 aa		13.91	□□□□□ -0.18
HLA-B-254	ENST00000497377	FAM155A	B1AL88	458 aa	Predicted RBP	13.9	□□□□□ -0.18
HLA-B-254	ENST00000497377	ERC2	O15083	957 aa		13.9	□□□□□ -0.18
HLA-B-254	ENST00000497377	USP2	O75604	605 aa	Predicted RBP	13.9	□□□□□ -0.18
HLA-B-254	ENST00000497377	WDHD1	O75717	1129 aa	Predicted RBP	13.9	□□□□□ -0.18
HLA-B-254	ENST00000497377	RGS3	P49796	1198 aa		13.9	□□□□□ -0.18
HLA-B-254	ENST00000497377	TCP10	Q12799	353 aa		13.9	□□□□□ -0.18
HLA-B-254	ENST00000497377	GRM1	Q13255	1194 aa		13.9	□□□□□ -0.18
HLA-B-254	ENST00000497377	PDAP1	Q13442	181 aa	Known RBP	13.9	□□□□□ -0.18
HLA-B-254	ENST00000497377	PRKG1	Q13976	671 aa		13.9	□□□□□ -0.18
HLA-B-254	ENST00000497377	SMC5	Q8IY18	1101 aa		13.9	□□□□□ -0.18
HLA-B-254	ENST00000497377	ANKRD13A	Q8IZ07	590 aa		13.9	□□□□□ -0.18
HLA-B-254	ENST00000497377	MAGEB6	Q8N7X4	407 aa		13.9	□□□□□ -0.18
HLA-B-254	ENST00000497377	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
HLA-B-254	ENST00000497377	NDUFB9	Q9Y6M9	179 aa		13.9	□□□□□ -0.18
HLA-B-254	ENST00000497377	COL2A1	P02458	1487 aa	Predicted RBP	13.9	□□□□□ -0.18
HLA-B-254	ENST00000497377	RASAL3	Q86YV0	1011 aa		13.89	□□□□□ -0.19
HLA-B-254	ENST00000497377	TEX11	Q8IYF3	940 aa		13.89	□□□□□ -0.19
HLA-B-254	ENST00000497377	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
HLA-B-254	ENST00000497377	MYH7	P12883	1935 aa		13.88	□□□□□ -0.19
HLA-B-254	ENST00000497377	ATRNL1	Q5VV63	1379 aa		13.88	□□□□□ -0.19
HLA-B-254	ENST00000497377	GLRX3	O76003	335 aa	Known RBP	13.88	□□□□□ -0.19
HLA-B-254	ENST00000497377	MX1	P20591	662 aa		13.88	□□□□□ -0.19
HLA-B-254	ENST00000497377	SLC9C2	Q5TAH2	1124 aa		13.88	□□□□□ -0.19
HLA-B-254	ENST00000497377	ZSCAN25	Q6NSZ9	544 aa		13.88	□□□□□ -0.19
HLA-B-254	ENST00000497377	ADGRA1	Q86SQ6	560 aa		13.88	□□□□□ -0.19
HLA-B-254	ENST00000497377	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.88	□□□□□ -0.19
HLA-B-254	ENST00000497377	CDAN1	Q8IWY9	1227 aa		13.88	□□□□□ -0.19
HLA-B-254	ENST00000497377	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.88	□□□□□ -0.19
HLA-B-254	ENST00000497377	SLC10A4	Q96EP9	437 aa		13.88	□□□□□ -0.19
HLA-B-254	ENST00000497377	ZNF341	Q9BYN7	854 aa		13.88	□□□□□ -0.19
HLA-B-254	ENST00000497377	PLSCR2	Q9NRY7	297 aa		13.88	□□□□□ -0.19
HLA-B-254	ENST00000497377	FOCAD	Q5VW36	1801 aa		13.87	□□□□□ -0.19
HLA-B-254	ENST00000497377	AOC2	O75106	756 aa		13.87	□□□□□ -0.19
HLA-B-254	ENST00000497377	PDE6A	P16499	860 aa		13.87	□□□□□ -0.19
HLA-B-254	ENST00000497377	MAP3K9	P80192	1104 aa		13.87	□□□□□ -0.19
HLA-B-254	ENST00000497377	PICALM	Q13492	652 aa		13.87	□□□□□ -0.19
HLA-B-254	ENST00000497377	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.87	□□□□□ -0.19	3e-15	■□□□□ 9.4
HLA-B-254	ENST00000497377	AIDA	Q96BJ3	306 aa		13.87	□□□□□ -0.19
HLA-B-254	ENST00000497377	CSRNP1	Q96S65	589 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms