RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 FAM177BA6PVY3 158 aa8.9□□□□□ -0.98
MSH5-219ENST00000497269 NID1P14543 1247 aa8.9□□□□□ -0.98
MSH5-219ENST00000497269 GRM2Q14416 872 aa8.9□□□□□ -0.98
MSH5-219ENST00000497269 SPRED3Q2MJR0 410 aa8.9□□□□□ -0.98
MSH5-219ENST00000497269 MSL1Q68DK7 614 aa8.9□□□□□ -0.98
MSH5-219ENST00000497269 NXPE4Q6UWF7 544 aa8.9□□□□□ -0.98
MSH5-219ENST00000497269 LINC00114Q6XXX2 140 aa8.9□□□□□ -0.98
MSH5-219ENST00000497269 TMEM102Q8N9M5 508 aaPredicted RBP8.9□□□□□ -0.98
MSH5-219ENST00000497269 NXPE3Q969Y0 559 aa8.9□□□□□ -0.98
MSH5-219ENST00000497269 BCO2Q9BYV7 579 aa8.9□□□□□ -0.98
MSH5-219ENST00000497269 C19orf44Q9H6X5 657 aa8.9□□□□□ -0.98
MSH5-219ENST00000497269 UNC13BO14795 1591 aa8.9□□□□□ -0.99
MSH5-219ENST00000497269 NWD1Q149M9 1564 aa8.9□□□□□ -0.99
MSH5-219ENST00000497269 NKTRP30414 1462 aaKnown RBP8.89□□□□□ -0.99
MSH5-219ENST00000497269 RPRD2Q5VT52 1461 aaKnown RBP8.89□□□□□ -0.99
MSH5-219ENST00000497269 LINC01387J3KSC0 135 aa8.89□□□□□ -0.99
MSH5-219ENST00000497269 GNB5O14775 395 aa8.89□□□□□ -0.99
MSH5-219ENST00000497269 PTPRAP18433 802 aa8.89□□□□□ -0.99
MSH5-219ENST00000497269 ERCC3P19447 782 aa8.89□□□□□ -0.99
MSH5-219ENST00000497269 EPHA1P21709 976 aa8.89□□□□□ -0.99
MSH5-219ENST00000497269 CDC27P30260 824 aa8.89□□□□□ -0.99
MSH5-219ENST00000497269 GRIA4P48058 902 aa8.89□□□□□ -0.99
MSH5-219ENST00000497269 COL9A3Q14050 684 aaPredicted RBP8.89□□□□□ -0.99
MSH5-219ENST00000497269 BRINP3Q76B58 766 aa8.89□□□□□ -0.99
MSH5-219ENST00000497269 FBXO33Q7Z6M2 555 aa8.89□□□□□ -0.99
MSH5-219ENST00000497269 BEND7Q8N7W2 519 aaPredicted RBP8.89□□□□□ -0.99
MSH5-219ENST00000497269 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.88□□□□□ -0.99
MSH5-219ENST00000497269 METP08581 1390 aa8.88□□□□□ -0.99
MSH5-219ENST00000497269 JCADQ9P266 1359 aa8.88□□□□□ -0.99
MSH5-219ENST00000497269 PRPF40AO75400 957 aaKnown RBP8.88□□□□□ -0.99
MSH5-219ENST00000497269 FCGRTP55899 365 aa8.88□□□□□ -0.99
MSH5-219ENST00000497269 XPCQ01831 940 aaPredicted RBP8.88□□□□□ -0.99
MSH5-219ENST00000497269 KIAA0319Q5VV43 1072 aa8.88□□□□□ -0.99
MSH5-219ENST00000497269 SCARF2Q96GP6 870 aaPredicted RBP8.88□□□□□ -0.99
MSH5-219ENST00000497269 TCF12Q99081 682 aa8.88□□□□□ -0.99
MSH5-219ENST00000497269 MUC3BQ9H195 1237 aa8.88□□□□□ -0.99
MSH5-219ENST00000497269 STK17AQ9UEE5 414 aa8.88□□□□□ -0.99
MSH5-219ENST00000497269 PARP2Q9UGN5 583 aa8.88□□□□□ -0.99
MSH5-219ENST00000497269 LRP6O75581 1613 aa8.87□□□□□ -0.99
MSH5-219ENST00000497269 BAG6P46379 1132 aa8.87□□□□□ -0.99
MSH5-219ENST00000497269 CCNJLQ8IV13 435 aa8.87□□□□□ -0.99
MSH5-219ENST00000497269 RGS22Q8NE09 1264 aa8.87□□□□□ -0.99
MSH5-219ENST00000497269 FBF1Q8TES7 1133 aa8.87□□□□□ -0.99
MSH5-219ENST00000497269 SLC7A3Q8WY07 619 aa8.87□□□□□ -0.99
MSH5-219ENST00000497269 TTC9Q92623 222 aa8.87□□□□□ -0.99
MSH5-219ENST00000497269 CARD10Q9BWT7 1032 aa8.87□□□□□ -0.99
MSH5-219ENST00000497269 IQGAP3Q86VI3 1631 aa8.87□□□□□ -0.99
MSH5-219ENST00000497269 ROCK1Q13464 1354 aa8.86□□□□□ -0.99
MSH5-219ENST00000497269 A0A096LPE4 126 aa8.86□□□□□ -0.99
MSH5-219ENST00000497269 A0A1W2PPZ6 126 aa8.86□□□□□ -0.99
MSH5-219ENST00000497269 COL19A1Q14993 1142 aa8.86□□□□□ -0.99
MSH5-219ENST00000497269 OSBPL7Q9BZF2 842 aa8.86□□□□□ -0.99
MSH5-219ENST00000497269 PRDM6Q9NQX0 595 aa8.86□□□□□ -0.99
MSH5-219ENST00000497269 SPG7Q9UQ90 795 aa8.86□□□□□ -0.99
MSH5-219ENST00000497269 PPME1Q9Y570 386 aa8.86□□□□□ -0.99
MSH5-219ENST00000497269 COL16A1Q07092 1604 aaPredicted RBP8.86□□□□□ -0.99
MSH5-219ENST00000497269 CABP4P57796 275 aa8.85□□□□□ -0.99
MSH5-219ENST00000497269 PSMD2Q13200 908 aa8.85□□□□□ -0.99
MSH5-219ENST00000497269 DTHD1Q6ZMT9 781 aa8.85□□□□□ -0.99
MSH5-219ENST00000497269 GLIS3Q8NEA6 775 aa8.85□□□□□ -0.99
MSH5-219ENST00000497269 BSNDQ8WZ55 320 aa8.85□□□□□ -0.99
MSH5-219ENST00000497269 C8orf37Q96NL8 207 aa8.85□□□□□ -0.99
MSH5-219ENST00000497269 BHLHE41Q9C0J9 482 aaPredicted RBP8.85□□□□□ -0.99
MSH5-219ENST00000497269 ABCB6Q9NP58 842 aa8.85□□□□□ -0.99
MSH5-219ENST00000497269 AKAP2Q9Y2D5 859 aa8.85□□□□□ -0.99
MSH5-219ENST00000497269 ZNF157P51786 506 aaPredicted RBP8.84□□□□□ -0.99
MSH5-219ENST00000497269 RGL3Q3MIN7 710 aa8.84□□□□□ -0.99
MSH5-219ENST00000497269 HGSNATQ68CP4 663 aa8.84□□□□□ -0.99
MSH5-219ENST00000497269 ORAI2Q96SN7 254 aa8.84□□□□□ -0.99
MSH5-219ENST00000497269 SOX13Q9UN79 622 aa8.84□□□□□ -0.99
MSH5-219ENST00000497269 TRAK1Q9UPV9 953 aa8.84□□□□□ -0.99
MSH5-219ENST00000497269 TRPM2O94759 1503 aa8.84□□□□□ -0.99
MSH5-219ENST00000497269 AFF2P51816 1311 aa8.83□□□□□ -1
MSH5-219ENST00000497269 SPHKAPQ2M3C7 1700 aa8.83□□□□□ -1
MSH5-219ENST00000497269 A0A0A0MRY4 1105 aa8.83□□□□□ -1
MSH5-219ENST00000497269 TMEM238LA0A1B0GVL6 79 aa8.83□□□□□ -1
MSH5-219ENST00000497269 RXRBP28702 533 aa8.83□□□□□ -1
MSH5-219ENST00000497269 GNA15P30679 374 aa8.83□□□□□ -1
MSH5-219ENST00000497269 TRIM28Q13263 835 aaKnown RBP8.83□□□□□ -1
MSH5-219ENST00000497269 ADAM19Q9H013 955 aa8.83□□□□□ -1
MSH5-219ENST00000497269 MRS2Q9HD23 443 aa8.83□□□□□ -1
MSH5-219ENST00000497269 PPP4R2Q9NY27 417 aa8.83□□□□□ -1
MSH5-219ENST00000497269 STK26Q9P289 416 aa8.83□□□□□ -1
MSH5-219ENST00000497269 CLTCL1P53675 1640 aa8.83□□□□□ -1
MSH5-219ENST00000497269 NRXN3Q9Y4C0 1643 aa8.83□□□□□ -1
MSH5-219ENST00000497269 SPATA31A6Q5VVP1 1343 aa8.82□□□□□ -1
MSH5-219ENST00000497269 PIK3R2O00459 728 aa8.82□□□□□ -1
MSH5-219ENST00000497269 USP17L7P0C7H9 530 aa8.82□□□□□ -1
MSH5-219ENST00000497269 ZNF16P17020 682 aaPredicted RBP8.82□□□□□ -1
MSH5-219ENST00000497269 COL8A1P27658 744 aa8.82□□□□□ -1
MSH5-219ENST00000497269 RAC1P63000 192 aa8.82□□□□□ -1
MSH5-219ENST00000497269 IKBKEQ14164 716 aa8.82□□□□□ -1
MSH5-219ENST00000497269 GRIK4Q16099 956 aa8.82□□□□□ -1
MSH5-219ENST00000497269 ZNF772Q68DY9 489 aaPredicted RBP8.82□□□□□ -1
MSH5-219ENST00000497269 FAM117BQ6P1L5 589 aa8.82□□□□□ -1
MSH5-219ENST00000497269 VN1R5Q7Z5H4 357 aa8.82□□□□□ -1
MSH5-219ENST00000497269 C12orf49Q9H741 205 aa8.82□□□□□ -1
MSH5-219ENST00000497269 NOP53Q9NZM5 478 aaKnown RBP8.82□□□□□ -1
MSH5-219ENST00000497269 H3BRJ5 948 aa8.81□□□□□ -1
MSH5-219ENST00000497269 FBXO24O75426 580 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms