RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 YTHDF3Q7Z739 585 aaKnown RBP14.76□□□□□ -0.05
VEGFA-215ENST00000497139 MLKLQ8NB16 471 aa14.76□□□□□ -0.05
VEGFA-215ENST00000497139 CRACR2AQ9BSW2 395 aa14.76□□□□□ -0.05
VEGFA-215ENST00000497139 PAGR1Q9BTK6 254 aa14.76□□□□□ -0.05
VEGFA-215ENST00000497139 BOLA2Q9H3K6 86 aa14.76□□□□□ -0.05
VEGFA-215ENST00000497139 SLIT1O75093 1534 aa14.76□□□□□ -0.05
VEGFA-215ENST00000497139 MROH7-TTC4A0A0A0MT08 1334 aa14.76□□□□□ -0.05
VEGFA-215ENST00000497139 NR1I3Q14994 352 aa14.76□□□□□ -0.05
VEGFA-215ENST00000497139 PLCB4Q15147 1175 aa14.76□□□□□ -0.05
VEGFA-215ENST00000497139 RUBCNQ92622 972 aa14.76□□□□□ -0.05
VEGFA-215ENST00000497139 C8orf76Q96K31 380 aa14.76□□□□□ -0.05
VEGFA-215ENST00000497139 IRX2Q9BZI1 471 aaPredicted RBP14.76□□□□□ -0.05
VEGFA-215ENST00000497139 MCM8Q9UJA3 840 aa14.76□□□□□ -0.05
VEGFA-215ENST00000497139 A0A1B0GTH6 734 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 PI4KAP2A4QPH2 592 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 GOLGA6CA6NDK9 693 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 GOLGA6DP0CG33 693 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 ELF1P32519 619 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 AMPD2Q01433 879 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 MCMDC2Q4G0Z9 681 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 PI4KAP1Q8N8J0 262 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 CAPS2Q9BXY5 557 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 KAT14Q9H8E8 782 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 GOLGA6AQ9NYA3 693 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 MYO6Q9UM54 1294 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 TOPAZ1Q8N9V7 1692 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 UBR1Q8IWV7 1749 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 OVOS2A0A0G2JMS6 1433 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 FDPSP14324 419 aaKnown RBP14.75□□□□□ -0.05
VEGFA-215ENST00000497139 ATP5JP18859 108 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 FNTAP49354 379 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 GUCY1B3Q02153 619 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 PREPLQ4J6C6 727 aaPredicted RBP14.75□□□□□ -0.05
VEGFA-215ENST00000497139 EP400NLQ6ZTU2 488 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 MICALCLQ6ZW33 695 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 TXNDC2Q86VQ3 553 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 PPFIBP1Q86W92 1011 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 SLC35F6Q8N357 371 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 TRIML1Q8N9V2 468 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 SH3TC1Q8TE82 1336 aa14.75□□□□□ -0.05
VEGFA-215ENST00000497139 SOWAHDA6NJG2 315 aa14.74□□□□□ -0.05
VEGFA-215ENST00000497139 GOLGA8KD6RF30 607 aa14.74□□□□□ -0.05
VEGFA-215ENST00000497139 KIAA0754O94854 1291 aa14.74□□□□□ -0.05
VEGFA-215ENST00000497139 LRCH2Q5VUJ6 765 aa14.74□□□□□ -0.05
VEGFA-215ENST00000497139 CCDC102BQ68D86 513 aa14.74□□□□□ -0.05
VEGFA-215ENST00000497139 RAD9BQ6WBX8 426 aa14.74□□□□□ -0.05
VEGFA-215ENST00000497139 BCAS4Q8TDM0 211 aa14.74□□□□□ -0.05
VEGFA-215ENST00000497139 MIEF2Q96C03 454 aa14.74□□□□□ -0.05
VEGFA-215ENST00000497139 ZNF609O15014 1411 aa14.74□□□□□ -0.05
VEGFA-215ENST00000497139 ZEB2O60315 1214 aa14.74□□□□□ -0.05
VEGFA-215ENST00000497139 RESP18Q5W5W9 173 aa14.74□□□□□ -0.05
VEGFA-215ENST00000497139 CNGA4Q8IV77 575 aa14.74□□□□□ -0.05
VEGFA-215ENST00000497139 DSCC1Q9BVC3 393 aa14.74□□□□□ -0.05
VEGFA-215ENST00000497139 C9orf78Q9NZ63 289 aaPredicted RBP14.74□□□□□ -0.05
VEGFA-215ENST00000497139 PA2G4Q9UQ80 394 aaKnown RBP14.74□□□□□ -0.05
VEGFA-215ENST00000497139 TMEM2Q9UHN6 1383 aa14.74□□□□□ -0.05
VEGFA-215ENST00000497139 UTYO14607 1347 aa14.74□□□□□ -0.05
VEGFA-215ENST00000497139 CCT2P78371 535 aaKnown RBP14.73□□□□□ -0.05
VEGFA-215ENST00000497139 PNOCQ13519 176 aa14.73□□□□□ -0.05
VEGFA-215ENST00000497139 MTF1Q14872 753 aa14.73□□□□□ -0.05
VEGFA-215ENST00000497139 STOX1Q6ZVD7 989 aa14.73□□□□□ -0.05
VEGFA-215ENST00000497139 NOA1Q8NC60 698 aaKnown RBP14.73□□□□□ -0.05
VEGFA-215ENST00000497139 SEC62Q99442 399 aaKnown RBP14.73□□□□□ -0.05
VEGFA-215ENST00000497139 CCDC8Q9H0W5 538 aaPredicted RBP14.73□□□□□ -0.05
VEGFA-215ENST00000497139 NT5DC1Q5TFE4 455 aa14.73□□□□□ -0.05
VEGFA-215ENST00000497139 NBPF14Q5TI25 921 aa14.73□□□□□ -0.05
VEGFA-215ENST00000497139 ISM2Q6H9L7 571 aa14.73□□□□□ -0.05
VEGFA-215ENST00000497139 EGFL6Q8IUX8 553 aa14.73□□□□□ -0.05
VEGFA-215ENST00000497139 SH3GL2Q99962 352 aa14.73□□□□□ -0.05
VEGFA-215ENST00000497139 JPH2Q9BR39 696 aaPredicted RBP14.73□□□□□ -0.05
VEGFA-215ENST00000497139 VEZTQ9HBM0 779 aa14.73□□□□□ -0.05
VEGFA-215ENST00000497139 NFE2L3Q9Y4A8 694 aa14.73□□□□□ -0.05
VEGFA-215ENST00000497139 KDM3BQ7LBC6 1761 aa14.73□□□□□ -0.05
VEGFA-215ENST00000497139 GRIN2DO15399 1336 aa14.73□□□□□ -0.05
VEGFA-215ENST00000497139 GGCXP38435 758 aa14.72□□□□□ -0.05
VEGFA-215ENST00000497139 MRPL12P52815 198 aaKnown RBP14.72□□□□□ -0.05
VEGFA-215ENST00000497139 SKOR1P84550 965 aa14.72□□□□□ -0.05
VEGFA-215ENST00000497139 WLSQ5T9L3 541 aa14.72□□□□□ -0.05
VEGFA-215ENST00000497139 METTL16Q86W50 562 aaKnown RBP14.72□□□□□ -0.05
VEGFA-215ENST00000497139 TMTC1Q8IUR5 882 aa14.72□□□□□ -0.05
VEGFA-215ENST00000497139 LRRC2Q9BYS8 371 aa14.72□□□□□ -0.05
VEGFA-215ENST00000497139 GGA2Q9UJY4 613 aa14.72□□□□□ -0.05
VEGFA-215ENST00000497139 CAPN7Q9Y6W3 813 aa14.72□□□□□ -0.05
VEGFA-215ENST00000497139 GCFC2P16383 781 aaKnown RBP14.72□□□□□ -0.05
VEGFA-215ENST00000497139 NF2P35240 595 aa14.72□□□□□ -0.05
VEGFA-215ENST00000497139 CKAP4Q07065 602 aaKnown RBP14.72□□□□□ -0.05
VEGFA-215ENST00000497139 FMNL3Q8IVF7 1028 aa14.72□□□□□ -0.05
VEGFA-215ENST00000497139 NCOA5Q9HCD5 579 aaKnown RBP14.72□□□□□ -0.05
VEGFA-215ENST00000497139 ITIH6Q6UXX5 1313 aa14.72□□□□□ -0.05
VEGFA-215ENST00000497139 H0YHG0 523 aa14.72□□□□□ -0.05
VEGFA-215ENST00000497139 MFAP3LO75121 409 aa14.72□□□□□ -0.05
VEGFA-215ENST00000497139 EPB41P11171 864 aaKnown RBP14.72□□□□□ -0.05
VEGFA-215ENST00000497139 ERCC5P28715 1186 aaPredicted RBP14.72□□□□□ -0.05
VEGFA-215ENST00000497139 KIF23Q02241 960 aaPredicted RBP14.72□□□□□ -0.05
VEGFA-215ENST00000497139 CRYMQ14894 314 aa14.72□□□□□ -0.05
VEGFA-215ENST00000497139 UBE3BQ7Z3V4 1068 aa14.72□□□□□ -0.05
VEGFA-215ENST00000497139 OTUD6BQ8N6M0 293 aa14.72□□□□□ -0.05
VEGFA-215ENST00000497139 IL17REQ8NFR9 667 aa14.72□□□□□ -0.05
VEGFA-215ENST00000497139 CTAGE1Q96RT6 745 aa14.72□□□□□ -0.05
VEGFA-215ENST00000497139 PCDHA5Q9Y5H7 936 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms