RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 DDX60LQ5H9U9 1706 aaKnown RBP21.79■■□□□ 1.08
RGP1-202ENST00000496906 SCN4AP35499 1836 aa21.79■■□□□ 1.08
RGP1-202ENST00000496906 NAV1Q8NEY1 1877 aa21.79■■□□□ 1.08
RGP1-202ENST00000496906 EPHX2P34913 555 aa21.78■■□□□ 1.08
RGP1-202ENST00000496906 FKBP1CQ5VVH2 108 aa21.78■■□□□ 1.08
RGP1-202ENST00000496906 C22orf23Q9BZE7 217 aa21.78■■□□□ 1.08
RGP1-202ENST00000496906 MCM9Q9NXL9 1143 aa21.78■■□□□ 1.08
RGP1-202ENST00000496906 ASTN2O75129 1339 aaPredicted RBP21.78■■□□□ 1.08
RGP1-202ENST00000496906 CREB3L3Q68CJ9 461 aa21.78■■□□□ 1.08
RGP1-202ENST00000496906 CTR9Q6PD62 1173 aa21.78■■□□□ 1.08
RGP1-202ENST00000496906 OSBPL5Q9H0X9 879 aaPredicted RBP21.78■■□□□ 1.08
RGP1-202ENST00000496906 VEZTQ9HBM0 779 aa21.78■■□□□ 1.08
RGP1-202ENST00000496906 ARPP21Q9UBL0 812 aaPredicted RBP21.78■■□□□ 1.08
RGP1-202ENST00000496906 USP17L12C9JPN9 530 aa21.77■■□□□ 1.08
RGP1-202ENST00000496906 USP17L21D6R901 530 aa21.77■■□□□ 1.08
RGP1-202ENST00000496906 SLC27A2O14975 620 aa21.77■■□□□ 1.08
RGP1-202ENST00000496906 ENTPD3O75355 529 aa21.77■■□□□ 1.08
RGP1-202ENST00000496906 CYP21A2P08686 494 aa21.77■■□□□ 1.08
RGP1-202ENST00000496906 MCCP23508 829 aa21.77■■□□□ 1.08
RGP1-202ENST00000496906 SBK1Q52WX2 424 aa21.77■■□□□ 1.08
RGP1-202ENST00000496906 USP50Q70EL3 339 aaPredicted RBP21.77■■□□□ 1.08
RGP1-202ENST00000496906 TAF1DQ9H5J8 278 aaPredicted RBP21.77■■□□□ 1.08
RGP1-202ENST00000496906 BAZ2AQ9UIF9 1905 aaKnown RBP21.76■■□□□ 1.07
RGP1-202ENST00000496906 TCP10L2B9ZVM9 353 aa21.76■■□□□ 1.07
RGP1-202ENST00000496906 RBM25P49756 843 aaKnown RBP21.76■■□□□ 1.07
RGP1-202ENST00000496906 IMMTQ16891 758 aaKnown RBP21.76■■□□□ 1.07
RGP1-202ENST00000496906 KCNB2Q92953 911 aa21.76■■□□□ 1.07
RGP1-202ENST00000496906 TBC1D32Q96NH3 1257 aa21.76■■□□□ 1.07
RGP1-202ENST00000496906 SAP30BPQ9UHR5 308 aaKnown RBP21.76■■□□□ 1.07
RGP1-202ENST00000496906 PALD1Q9ULE6 856 aa21.76■■□□□ 1.07
RGP1-202ENST00000496906 CNTNAP1P78357 1384 aa21.75■■□□□ 1.07
RGP1-202ENST00000496906 TCP10Q12799 353 aa21.75■■□□□ 1.07
RGP1-202ENST00000496906 RNF20Q5VTR2 975 aa21.75■■□□□ 1.07
RGP1-202ENST00000496906 ZFPM1Q8IX07 1006 aa21.75■■□□□ 1.07
RGP1-202ENST00000496906 COL2A1P02458 1487 aaPredicted RBP21.75■■□□□ 1.07
RGP1-202ENST00000496906 CYP2D7A0A087X1C5 515 aa21.74■■□□□ 1.07
RGP1-202ENST00000496906 ZNF213O14771 459 aa21.74■■□□□ 1.07
RGP1-202ENST00000496906 CYP2D6P10635 497 aa21.74■■□□□ 1.07
RGP1-202ENST00000496906 HAND2P61296 217 aa21.74■■□□□ 1.07
RGP1-202ENST00000496906 ANGEL2Q5VTE6 544 aaKnown RBP21.74■■□□□ 1.07
RGP1-202ENST00000496906 FAM83AQ86UY5 434 aa21.74■■□□□ 1.07
RGP1-202ENST00000496906 GGA3Q9NZ52 723 aa21.74■■□□□ 1.07
RGP1-202ENST00000496906 LAMA4Q16363 1823 aa21.74■■□□□ 1.07
RGP1-202ENST00000496906 MINDY4BA8MYZ0 360 aa21.74■■□□□ 1.07
RGP1-202ENST00000496906 PPARAQ07869 468 aa21.74■■□□□ 1.07
RGP1-202ENST00000496906 TNFAIP1Q13829 316 aa21.74■■□□□ 1.07
RGP1-202ENST00000496906 C12orf60Q5U649 245 aa21.74■■□□□ 1.07
RGP1-202ENST00000496906 RASEFQ8IZ41 740 aa21.74■■□□□ 1.07
RGP1-202ENST00000496906 FAM151AQ8WW52 585 aa21.74■■□□□ 1.07
RGP1-202ENST00000496906 NBPF3Q9H094 633 aa21.74■■□□□ 1.07
RGP1-202ENST00000496906 ANAPC4Q9UJX5 808 aa21.74■■□□□ 1.07
RGP1-202ENST00000496906 TAF6LQ9Y6J9 622 aa21.74■■□□□ 1.07
RGP1-202ENST00000496906 ATRNL1Q5VV63 1379 aa21.73■■□□□ 1.07
RGP1-202ENST00000496906 SMIM22K7EJ46 135 aa21.73■■□□□ 1.07
RGP1-202ENST00000496906 POLR3DP05423 398 aaPredicted RBP21.73■■□□□ 1.07
RGP1-202ENST00000496906 YY1P25490 414 aa21.73■■□□□ 1.07
RGP1-202ENST00000496906 EVX2Q03828 476 aa21.73■■□□□ 1.07
RGP1-202ENST00000496906 SLC4A8Q2Y0W8 1093 aa21.73■■□□□ 1.07
RGP1-202ENST00000496906 SH3BP5LQ7L8J4 393 aa21.73■■□□□ 1.07
RGP1-202ENST00000496906 PNMA8AQ86V59 439 aaPredicted RBP21.73■■□□□ 1.07
RGP1-202ENST00000496906 APOBEC3FQ8IUX4 373 aaKnown RBP21.73■■□□□ 1.07
RGP1-202ENST00000496906 AMOTL1Q8IY63 956 aa21.73■■□□□ 1.07
RGP1-202ENST00000496906 SNX14Q9Y5W7 946 aa21.73■■□□□ 1.07
RGP1-202ENST00000496906 MYH1P12882 1939 aa21.73■■□□□ 1.07
RGP1-202ENST00000496906 PITPNM2Q9BZ72 1349 aa21.73■■□□□ 1.07
RGP1-202ENST00000496906 LAMB1P07942 1786 aa21.72■■□□□ 1.07
RGP1-202ENST00000496906 ZKSCAN1P17029 563 aaPredicted RBP21.72■■□□□ 1.07
RGP1-202ENST00000496906 TNNI2P48788 182 aa21.72■■□□□ 1.07
RGP1-202ENST00000496906 PLCD1P51178 756 aa21.72■■□□□ 1.07
RGP1-202ENST00000496906 ANAPC15P60006 121 aa21.72■■□□□ 1.07
RGP1-202ENST00000496906 TSGA10IPQ3SY00 556 aa21.72■■□□□ 1.07
RGP1-202ENST00000496906 DHX36Q9H2U1 1008 aaKnown RBP21.72■■□□□ 1.07
RGP1-202ENST00000496906 RRAGCQ9HB90 399 aa21.72■■□□□ 1.07
RGP1-202ENST00000496906 ROBO3Q96MS0 1386 aa21.72■■□□□ 1.07
RGP1-202ENST00000496906 DDTLA6NHG4 134 aaPredicted RBP21.71■■□□□ 1.07
RGP1-202ENST00000496906 VEGFAP15692 232 aaPredicted RBP21.71■■□□□ 1.07
RGP1-202ENST00000496906 TTC6Q86TZ1 520 aa21.71■■□□□ 1.07
RGP1-202ENST00000496906 TBC1D10CQ8IV04 446 aa21.71■■□□□ 1.07
RGP1-202ENST00000496906 ZC3H15Q8WU90 426 aaKnown RBP21.71■■□□□ 1.07
RGP1-202ENST00000496906 IL17RAQ96F46 866 aa21.71■■□□□ 1.07
RGP1-202ENST00000496906 SCAF8Q9UPN6 1271 aaKnown RBP21.71■■□□□ 1.07
RGP1-202ENST00000496906 CTDSPL2Q05D32 466 aa21.7■■□□□ 1.06
RGP1-202ENST00000496906 RASA3Q14644 834 aa21.7■■□□□ 1.06
RGP1-202ENST00000496906 TMEM39BQ9GZU3 492 aa21.7■■□□□ 1.06
RGP1-202ENST00000496906 HLA-DOAP06340 250 aa21.7■■□□□ 1.06
RGP1-202ENST00000496906 EAPPQ56P03 285 aaPredicted RBP21.7■■□□□ 1.06
RGP1-202ENST00000496906 STOX1Q6ZVD7 989 aa21.7■■□□□ 1.06
RGP1-202ENST00000496906 ZSCAN29Q8IWY8 852 aaPredicted RBP21.7■■□□□ 1.06
RGP1-202ENST00000496906 ZNF526Q8TF50 670 aaPredicted RBP21.7■■□□□ 1.06
RGP1-202ENST00000496906 DEFB129Q9H1M3 183 aa21.7■■□□□ 1.06
RGP1-202ENST00000496906 NMRK2Q9NPI5 230 aa21.7■■□□□ 1.06
RGP1-202ENST00000496906 PGAP2Q9UHJ9 254 aa21.7■■□□□ 1.06
RGP1-202ENST00000496906 STAG1Q8WVM7 1258 aa21.69■■□□□ 1.06
RGP1-202ENST00000496906 KIF2CQ99661 725 aa21.69■■□□□ 1.06
RGP1-202ENST00000496906 TACC3Q9Y6A5 838 aa21.69■■□□□ 1.06
RGP1-202ENST00000496906 E7EWF7 191 aa21.68■■□□□ 1.06
RGP1-202ENST00000496906 AKNAD1Q5T1N1 836 aa21.68■■□□□ 1.06
RGP1-202ENST00000496906 CDAN1Q8IWY9 1227 aa21.68■■□□□ 1.06
RGP1-202ENST00000496906 DCPSQ96C86 337 aaKnown RBP21.68■■□□□ 1.06
RGP1-202ENST00000496906 TEPSINQ96N21 525 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms