RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 ZNF862O60290 1169 aa6.91□□□□□ -1.3
CD46-218ENST00000496723 FAAP100Q0VG06 881 aa6.91□□□□□ -1.3
CD46-218ENST00000496723 BNIP3Q12983 259 aa6.91□□□□□ -1.3
CD46-218ENST00000496723 IFI16Q16666 785 aaKnown RBP6.91□□□□□ -1.3
CD46-218ENST00000496723 SND1Q7KZF4 910 aaKnown RBP eCLIP6.91□□□□□ -1.38e-20■■■■■ 28.6
CD46-218ENST00000496723 GLIS3Q8NEA6 775 aa6.91□□□□□ -1.3
CD46-218ENST00000496723 ALKBH8Q96BT7 664 aaKnown RBP6.91□□□□□ -1.3
CD46-218ENST00000496723 CD8BP10966 210 aa6.9□□□□□ -1.3
CD46-218ENST00000496723 XRCC5P13010 732 aaKnown RBP6.9□□□□□ -1.3
CD46-218ENST00000496723 GRM2Q14416 872 aa6.9□□□□□ -1.3
CD46-218ENST00000496723 ZSCAN29Q8IWY8 852 aaPredicted RBP6.9□□□□□ -1.3
CD46-218ENST00000496723 FAM181AQ8N9Y4 354 aa6.9□□□□□ -1.3
CD46-218ENST00000496723 TMEM40Q8WWA1 233 aa6.9□□□□□ -1.3
CD46-218ENST00000496723 RC3H2Q9HBD1 1191 aaKnown RBP6.9□□□□□ -1.3
CD46-218ENST00000496723 TMEM39AQ9NV64 488 aa6.9□□□□□ -1.3
CD46-218ENST00000496723 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.9□□□□□ -1.3
CD46-218ENST00000496723 CARMIL2Q6F5E8 1435 aa6.9□□□□□ -1.31
CD46-218ENST00000496723 TMEM265A0A087WTH1 108 aa6.89□□□□□ -1.31
CD46-218ENST00000496723 TREHO43280 583 aa6.89□□□□□ -1.31
CD46-218ENST00000496723 FARP2O94887 1054 aaPredicted RBP6.89□□□□□ -1.31
CD46-218ENST00000496723 PLCB3Q01970 1234 aa6.89□□□□□ -1.31
CD46-218ENST00000496723 TTLL4Q14679 1199 aa6.89□□□□□ -1.31
CD46-218ENST00000496723 DTHD1Q6ZMT9 781 aa6.89□□□□□ -1.31
CD46-218ENST00000496723 PI4K2BQ8TCG2 481 aa6.89□□□□□ -1.31
CD46-218ENST00000496723 HRASLS5Q96KN8 279 aa6.89□□□□□ -1.31
CD46-218ENST00000496723 ASB16Q96NS5 453 aa6.89□□□□□ -1.31
CD46-218ENST00000496723 CSRNP1Q96S65 589 aa6.89□□□□□ -1.31
CD46-218ENST00000496723 DUSP23Q9BVJ7 150 aa6.89□□□□□ -1.31
CD46-218ENST00000496723 ZC3H12CQ9C0D7 883 aaKnown RBP6.89□□□□□ -1.31
CD46-218ENST00000496723 MBNL3Q9NUK0 354 aaKnown RBP6.89□□□□□ -1.31
CD46-218ENST00000496723 RNGTTO60942 597 aaKnown RBP6.88□□□□□ -1.31
CD46-218ENST00000496723 RNASE1P07998 156 aaKnown RBP6.88□□□□□ -1.31
CD46-218ENST00000496723 ZNF157P51786 506 aaPredicted RBP6.88□□□□□ -1.31
CD46-218ENST00000496723 DSC3Q14574 896 aa6.88□□□□□ -1.31
CD46-218ENST00000496723 ZNF648Q5T619 568 aaPredicted RBP6.88□□□□□ -1.31
CD46-218ENST00000496723 ARHGAP27Q6ZUM4 889 aa6.88□□□□□ -1.31
CD46-218ENST00000496723 PDZD3Q86UT5 571 aa6.88□□□□□ -1.31
CD46-218ENST00000496723 GZF1Q9H116 711 aaPredicted RBP6.88□□□□□ -1.31
CD46-218ENST00000496723 DBX1A6NMT0 343 aa6.87□□□□□ -1.31
CD46-218ENST00000496723 CEACAM5P06731 702 aa6.87□□□□□ -1.31
CD46-218ENST00000496723 HCLS1P14317 486 aaPredicted RBP6.87□□□□□ -1.31
CD46-218ENST00000496723 OXCT1P55809 520 aa6.87□□□□□ -1.31
CD46-218ENST00000496723 ERVK-24P63145 666 aa6.87□□□□□ -1.31
CD46-218ENST00000496723 AOC3Q16853 763 aa6.87□□□□□ -1.31
CD46-218ENST00000496723 EPS8L3Q8TE67 593 aaKnown RBP6.87□□□□□ -1.31
CD46-218ENST00000496723 FAM168AQ92567 244 aa6.87□□□□□ -1.31
CD46-218ENST00000496723 NLRP2Q9NX02 1062 aa6.87□□□□□ -1.31
CD46-218ENST00000496723 ADAMTS6Q9UKP5 1117 aa6.87□□□□□ -1.31
CD46-218ENST00000496723 SNX11Q9Y5W9 270 aa6.87□□□□□ -1.31
CD46-218ENST00000496723 LEFTY1O75610 366 aa6.86□□□□□ -1.31
CD46-218ENST00000496723 PKN1Q16512 942 aa6.86□□□□□ -1.31
CD46-218ENST00000496723 ZC3H12AQ5D1E8 599 aaKnown RBP6.86□□□□□ -1.31
CD46-218ENST00000496723 ANGEL2Q5VTE6 544 aaKnown RBP6.86□□□□□ -1.31
CD46-218ENST00000496723 SLC23A3Q6PIS1 610 aa6.86□□□□□ -1.31
CD46-218ENST00000496723 RNF214Q8ND24 703 aa6.86□□□□□ -1.31
CD46-218ENST00000496723 KCNB2Q92953 911 aa6.86□□□□□ -1.31
CD46-218ENST00000496723 TNKS2Q9H2K2 1166 aa6.86□□□□□ -1.31
CD46-218ENST00000496723 SSU72Q9NP77 194 aaKnown RBP6.86□□□□□ -1.31
CD46-218ENST00000496723 GPN3Q9UHW5 284 aaPredicted RBP6.86□□□□□ -1.31
CD46-218ENST00000496723 PNMA6FA0A0J9YX94 578 aa6.85□□□□□ -1.31
CD46-218ENST00000496723 ARNTP27540 789 aa6.85□□□□□ -1.31
CD46-218ENST00000496723 MAPK8P45983 427 aa6.85□□□□□ -1.31
CD46-218ENST00000496723 FCGRTP55899 365 aa6.85□□□□□ -1.31
CD46-218ENST00000496723 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.85□□□□□ -1.31
CD46-218ENST00000496723 LRRN4CLQ8ND94 238 aa6.85□□□□□ -1.31
CD46-218ENST00000496723 EMILIN2Q9BXX0 1053 aa6.85□□□□□ -1.31
CD46-218ENST00000496723 IGF2BP3O00425 579 aaKnown RBP eCLIP6.84□□□□□ -1.31
CD46-218ENST00000496723 NEFMP07197 916 aa6.84□□□□□ -1.31
CD46-218ENST00000496723 FMR1Q06787 632 aaKnown RBP eCLIP6.84□□□□□ -1.31
CD46-218ENST00000496723 ENOX2Q16206 610 aaKnown RBP6.84□□□□□ -1.31
CD46-218ENST00000496723 KSR1Q8IVT5 923 aa6.84□□□□□ -1.31
CD46-218ENST00000496723 SULF2Q8IWU5 870 aa6.84□□□□□ -1.31
CD46-218ENST00000496723 FLAD1Q8NFF5 587 aa6.84□□□□□ -1.31
CD46-218ENST00000496723 BHLHE22Q8NFJ8 381 aaPredicted RBP6.84□□□□□ -1.31
CD46-218ENST00000496723 ASB11Q8WXH4 323 aa6.84□□□□□ -1.31
CD46-218ENST00000496723 ISL2Q96A47 359 aa6.84□□□□□ -1.31
CD46-218ENST00000496723 GTF2IRD1Q9UHL9 959 aa6.84□□□□□ -1.31
CD46-218ENST00000496723 PLAGL2Q9UPG8 496 aa6.84□□□□□ -1.31
CD46-218ENST00000496723 U3KQE9 123 aa6.84□□□□□ -1.31
CD46-218ENST00000496723 NME2P22392 152 aa6.83□□□□□ -1.32
CD46-218ENST00000496723 CD96P40200 585 aa6.83□□□□□ -1.32
CD46-218ENST00000496723 PI16Q6UXB8 463 aa6.83□□□□□ -1.32
CD46-218ENST00000496723 SLC38A3Q99624 504 aa6.83□□□□□ -1.32
CD46-218ENST00000496723 BCO2Q9BYV7 579 aa6.83□□□□□ -1.32
CD46-218ENST00000496723 FAM53CQ9NYF3 392 aa6.83□□□□□ -1.32
CD46-218ENST00000496723 ZBTB7CA1YPR0 619 aa6.82□□□□□ -1.32
CD46-218ENST00000496723 ANKRD33BA6NCL7 494 aa6.82□□□□□ -1.32
CD46-218ENST00000496723 ZNF252P-AS1Q0IIN9 211 aa6.82□□□□□ -1.32
CD46-218ENST00000496723 ZNF124Q15973 351 aa6.82□□□□□ -1.32
CD46-218ENST00000496723 MAP1SQ66K74 1059 aaPredicted RBP6.82□□□□□ -1.32
CD46-218ENST00000496723 TOP6BLQ8N6T0 577 aa6.82□□□□□ -1.32
CD46-218ENST00000496723 CACNA2D2Q9NY47 1150 aa6.82□□□□□ -1.32
CD46-218ENST00000496723 P4HBP07237 508 aaKnown RBP6.81□□□□□ -1.32
CD46-218ENST00000496723 CCDC27Q2M243 656 aa6.81□□□□□ -1.32
CD46-218ENST00000496723 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.81□□□□□ -1.32
CD46-218ENST00000496723 FAM214BQ7L5A3 538 aa6.81□□□□□ -1.32
CD46-218ENST00000496723 STK35Q8TDR2 534 aa6.81□□□□□ -1.32
CD46-218ENST00000496723 HEXIM2Q96MH2 286 aaKnown RBP6.81□□□□□ -1.32
CD46-218ENST00000496723 SETDB2Q96T68 719 aa6.81□□□□□ -1.32
CD46-218ENST00000496723 WWC3Q9ULE0 1092 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms