RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 NSUN4Q96CB9 384 aaKnown RBP10.2□□□□□ -0.78
U2AF1-212ENST00000496462 SLC10A4Q96EP9 437 aa10.2□□□□□ -0.78
U2AF1-212ENST00000496462 GINM1Q9NU53 330 aa10.2□□□□□ -0.78
U2AF1-212ENST00000496462 DAGLAQ9Y4D2 1042 aa10.2□□□□□ -0.78
U2AF1-212ENST00000496462 SPDYE2BA6NHP3 402 aa10.19□□□□□ -0.78
U2AF1-212ENST00000496462 RANBP6O60518 1105 aaKnown RBP10.19□□□□□ -0.78
U2AF1-212ENST00000496462 SPDYE6P0CI01 402 aa10.19□□□□□ -0.78
U2AF1-212ENST00000496462 TSPY3P0CV98 308 aa10.19□□□□□ -0.78
U2AF1-212ENST00000496462 TSPY8P0CW00 308 aa10.19□□□□□ -0.78
U2AF1-212ENST00000496462 MAP1SQ66K74 1059 aaPredicted RBP10.19□□□□□ -0.78
U2AF1-212ENST00000496462 SAMD7Q7Z3H4 446 aa10.19□□□□□ -0.78
U2AF1-212ENST00000496462 FAM163AQ96GL9 167 aaPredicted RBP10.19□□□□□ -0.78
U2AF1-212ENST00000496462 L3MBTL3Q96JM7 780 aaPredicted RBP10.19□□□□□ -0.78
U2AF1-212ENST00000496462 HERC5Q9UII4 1024 aaKnown RBP10.19□□□□□ -0.78
U2AF1-212ENST00000496462 NRXN2Q9P2S2 1712 aa10.19□□□□□ -0.78
U2AF1-212ENST00000496462 FAM83AQ86UY5 434 aa10.19□□□□□ -0.78
U2AF1-212ENST00000496462 COL11A2P13942 1736 aaPredicted RBP10.19□□□□□ -0.78
U2AF1-212ENST00000496462 CACNA1SQ13698 1873 aa10.19□□□□□ -0.78
U2AF1-212ENST00000496462 KIAA1551Q9HCM1 1747 aa10.19□□□□□ -0.78
U2AF1-212ENST00000496462 GPR75-ASB3A0A0A6YYF3 556 aa10.19□□□□□ -0.78
U2AF1-212ENST00000496462 EPS15P42566 896 aa10.19□□□□□ -0.78
U2AF1-212ENST00000496462 PPP4CP60510 307 aa10.19□□□□□ -0.78
U2AF1-212ENST00000496462 ZMYM1Q5SVZ6 1142 aa10.19□□□□□ -0.78
U2AF1-212ENST00000496462 PITPNM2Q9BZ72 1349 aa10.19□□□□□ -0.78
U2AF1-212ENST00000496462 ZBTB22O15209 634 aa10.18□□□□□ -0.78
U2AF1-212ENST00000496462 EPB41L2O43491 1005 aaKnown RBP10.18□□□□□ -0.78
U2AF1-212ENST00000496462 FKBP1BP68106 108 aa10.18□□□□□ -0.78
U2AF1-212ENST00000496462 TMTC2Q8N394 836 aa10.18□□□□□ -0.78
U2AF1-212ENST00000496462 ANKRD1Q15327 319 aa10.18□□□□□ -0.78
U2AF1-212ENST00000496462 DSCC1Q9BVC3 393 aa10.18□□□□□ -0.78
U2AF1-212ENST00000496462 SAP30BPQ9UHR5 308 aaKnown RBP10.18□□□□□ -0.78
U2AF1-212ENST00000496462 CCDC69A6NI79 296 aa10.18□□□□□ -0.78
U2AF1-212ENST00000496462 FSTL1Q12841 308 aa10.18□□□□□ -0.78
U2AF1-212ENST00000496462 RASA3Q14644 834 aa10.18□□□□□ -0.78
U2AF1-212ENST00000496462 PI16Q6UXB8 463 aa10.18□□□□□ -0.78
U2AF1-212ENST00000496462 MTMR14Q8NCE2 650 aa10.18□□□□□ -0.78
U2AF1-212ENST00000496462 NCOA7Q8NI08 942 aa10.18□□□□□ -0.78
U2AF1-212ENST00000496462 OTUD7AQ8TE49 926 aaPredicted RBP10.18□□□□□ -0.78
U2AF1-212ENST00000496462 TBC1D2Q9BYX2 928 aa10.18□□□□□ -0.78
U2AF1-212ENST00000496462 SERPINB13Q9UIV8 391 aa10.18□□□□□ -0.78
U2AF1-212ENST00000496462 APLP1P51693 650 aa10.17□□□□□ -0.78
U2AF1-212ENST00000496462 ZNF280AP59817 542 aaPredicted RBP10.17□□□□□ -0.78
U2AF1-212ENST00000496462 ANGEL1Q9UNK9 670 aaKnown RBP10.17□□□□□ -0.78
U2AF1-212ENST00000496462 TNRC6CQ9HCJ0 1690 aaKnown RBP10.17□□□□□ -0.78
U2AF1-212ENST00000496462 ARFGEF1Q9Y6D6 1849 aa10.17□□□□□ -0.78
U2AF1-212ENST00000496462 CHMLP26374 656 aa10.17□□□□□ -0.78
U2AF1-212ENST00000496462 DEFB129Q9H1M3 183 aa10.17□□□□□ -0.78
U2AF1-212ENST00000496462 CPLX1O14810 134 aa10.17□□□□□ -0.78
U2AF1-212ENST00000496462 PRKG1Q13976 671 aa10.17□□□□□ -0.78
U2AF1-212ENST00000496462 BLOC1S2Q6QNY1 142 aa10.17□□□□□ -0.78
U2AF1-212ENST00000496462 ANTXR1Q9H6X2 564 aa10.17□□□□□ -0.78
U2AF1-212ENST00000496462 USP14P54578 494 aa10.16□□□□□ -0.78
U2AF1-212ENST00000496462 SPDYE2Q495Y8 402 aa10.16□□□□□ -0.78
U2AF1-212ENST00000496462 CERKLQ49MI3 558 aaPredicted RBP10.16□□□□□ -0.78
U2AF1-212ENST00000496462 ESYT1Q9BSJ8 1104 aa10.16□□□□□ -0.78
U2AF1-212ENST00000496462 CYP46A1Q9Y6A2 500 aa10.16□□□□□ -0.78
U2AF1-212ENST00000496462 YDJCA8MPS7 323 aa10.16□□□□□ -0.78
U2AF1-212ENST00000496462 POTECB2RU33 542 aa10.16□□□□□ -0.78
U2AF1-212ENST00000496462 CELF2O95319 508 aaKnown RBP10.16□□□□□ -0.78
U2AF1-212ENST00000496462 PI4K2BQ8TCG2 481 aa10.16□□□□□ -0.78
U2AF1-212ENST00000496462 GBA2Q9HCG7 927 aaPredicted RBP10.16□□□□□ -0.78
U2AF1-212ENST00000496462 BRCA1P38398 1863 aaKnown RBP10.16□□□□□ -0.78
U2AF1-212ENST00000496462 ASNSP08243 561 aa10.16□□□□□ -0.78
U2AF1-212ENST00000496462 CDC42EP5Q6NZY7 148 aa10.16□□□□□ -0.78
U2AF1-212ENST00000496462 PNMA2Q9UL42 364 aa10.16□□□□□ -0.78
U2AF1-212ENST00000496462 NDUFB9Q9Y6M9 179 aa10.16□□□□□ -0.78
U2AF1-212ENST00000496462 USP17L12C9JPN9 530 aa10.16□□□□□ -0.78
U2AF1-212ENST00000496462 USP17L21D6R901 530 aa10.16□□□□□ -0.78
U2AF1-212ENST00000496462 WNT10BO00744 389 aa10.16□□□□□ -0.78
U2AF1-212ENST00000496462 IFNL3Q8IZI9 196 aa10.16□□□□□ -0.78
U2AF1-212ENST00000496462 STK11IPQ8N1F8 1099 aa10.16□□□□□ -0.78
U2AF1-212ENST00000496462 CCDC102AQ96A19 550 aa10.16□□□□□ -0.78
U2AF1-212ENST00000496462 KAT14Q9H8E8 782 aa10.16□□□□□ -0.78
U2AF1-212ENST00000496462 KCNQ5Q9NR82 932 aa10.16□□□□□ -0.78
U2AF1-212ENST00000496462 MKRN1Q9UHC7 482 aaKnown RBP10.16□□□□□ -0.78
U2AF1-212ENST00000496462 CCDC196A0A1B0GTZ2 297 aa10.15□□□□□ -0.78
U2AF1-212ENST00000496462 WTIPA6NIX2 430 aaPredicted RBP10.15□□□□□ -0.78
U2AF1-212ENST00000496462 NPM3O75607 178 aaKnown RBP10.15□□□□□ -0.78
U2AF1-212ENST00000496462 HSCBQ8IWL3 235 aa10.15□□□□□ -0.78
U2AF1-212ENST00000496462 ANKRD13AQ8IZ07 590 aa10.15□□□□□ -0.78
U2AF1-212ENST00000496462 EDC3Q96F86 508 aaKnown RBP10.15□□□□□ -0.78
U2AF1-212ENST00000496462 MXD3Q9BW11 206 aa10.15□□□□□ -0.78
U2AF1-212ENST00000496462 KIF5BP33176 963 aa10.15□□□□□ -0.78
U2AF1-212ENST00000496462 MAP3K9P80192 1104 aa10.15□□□□□ -0.78
U2AF1-212ENST00000496462 PRMT6Q96LA8 375 aaPredicted RBP10.15□□□□□ -0.78
U2AF1-212ENST00000496462 XBP1P17861 261 aa10.15□□□□□ -0.79
U2AF1-212ENST00000496462 GNAQP50148 359 aa10.15□□□□□ -0.79
U2AF1-212ENST00000496462 ABCB5Q2M3G0 1257 aa10.15□□□□□ -0.79
U2AF1-212ENST00000496462 SAMD1Q6SPF0 538 aaPredicted RBP10.15□□□□□ -0.79
U2AF1-212ENST00000496462 CATIPQ7Z7H3 387 aa10.15□□□□□ -0.79
U2AF1-212ENST00000496462 CTCFLQ8NI51 663 aaPredicted RBP10.15□□□□□ -0.79
U2AF1-212ENST00000496462 SH3RF3Q8TEJ3 882 aaPredicted RBP10.15□□□□□ -0.79
U2AF1-212ENST00000496462 OSBPL5Q9H0X9 879 aaPredicted RBP10.15□□□□□ -0.79
U2AF1-212ENST00000496462 GOPCQ9HD26 462 aa10.15□□□□□ -0.79
U2AF1-212ENST00000496462 DUOX1Q9NRD9 1551 aa10.14□□□□□ -0.79
U2AF1-212ENST00000496462 MCM2P49736 904 aa10.14□□□□□ -0.79
U2AF1-212ENST00000496462 HUNKP57058 714 aa10.14□□□□□ -0.79
U2AF1-212ENST00000496462 DYNLL1P63167 89 aaKnown RBP10.14□□□□□ -0.79
U2AF1-212ENST00000496462 CCDC96Q2M329 555 aa10.14□□□□□ -0.79
U2AF1-212ENST00000496462 IFIT3O14879 490 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms