RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 CTNNA3Q9UI47 895 aa26.01■■□□□ 1.75
ECHDC3-205ENST00000496136 NPM3O75607 178 aaKnown RBP26■■□□□ 1.75
ECHDC3-205ENST00000496136 TAF1DQ9H5J8 278 aaPredicted RBP26■■□□□ 1.75
ECHDC3-205ENST00000496136 UPF2Q9HAU5 1272 aaKnown RBP26■■□□□ 1.75
ECHDC3-205ENST00000496136 MCM9Q9NXL9 1143 aa26■■□□□ 1.75
ECHDC3-205ENST00000496136 ZMYM6O95789 1325 aa26■■□□□ 1.75
ECHDC3-205ENST00000496136 FKBP1CQ5VVH2 108 aa26■■□□□ 1.75
ECHDC3-205ENST00000496136 CTR9Q6PD62 1173 aa26■■□□□ 1.75
ECHDC3-205ENST00000496136 USP50Q70EL3 339 aaPredicted RBP26■■□□□ 1.75
ECHDC3-205ENST00000496136 VEZTQ9HBM0 779 aa26■■□□□ 1.75
ECHDC3-205ENST00000496136 TCP10L2B9ZVM9 353 aa25.99■■□□□ 1.75
ECHDC3-205ENST00000496136 USP17L12C9JPN9 530 aa25.99■■□□□ 1.75
ECHDC3-205ENST00000496136 USP17L21D6R901 530 aa25.99■■□□□ 1.75
ECHDC3-205ENST00000496136 HSPA4P34932 840 aa25.99■■□□□ 1.75
ECHDC3-205ENST00000496136 TCP10Q12799 353 aa25.99■■□□□ 1.75
ECHDC3-205ENST00000496136 ZFPM1Q8IX07 1006 aa25.99■■□□□ 1.75
ECHDC3-205ENST00000496136 OSBPL5Q9H0X9 879 aaPredicted RBP25.98■■□□□ 1.75
ECHDC3-205ENST00000496136 RRAGCQ9HB90 399 aa25.98■■□□□ 1.75
ECHDC3-205ENST00000496136 MYH1P12882 1939 aa25.98■■□□□ 1.75
ECHDC3-205ENST00000496136 ENTPD3O75355 529 aa25.97■■□□□ 1.75
ECHDC3-205ENST00000496136 C22orf23Q9BZE7 217 aa25.97■■□□□ 1.75
ECHDC3-205ENST00000496136 SAP30BPQ9UHR5 308 aaKnown RBP25.97■■□□□ 1.75
ECHDC3-205ENST00000496136 PALD1Q9ULE6 856 aa25.97■■□□□ 1.75
ECHDC3-205ENST00000496136 POLR2AP24928 1970 aaKnown RBP25.97■■□□□ 1.75
ECHDC3-205ENST00000496136 CYP21A2P08686 494 aa25.97■■□□□ 1.75
ECHDC3-205ENST00000496136 VEGFAP15692 232 aaPredicted RBP25.97■■□□□ 1.75
ECHDC3-205ENST00000496136 SBK1Q52WX2 424 aa25.97■■□□□ 1.75
ECHDC3-205ENST00000496136 ANGEL2Q5VTE6 544 aaKnown RBP25.97■■□□□ 1.75
ECHDC3-205ENST00000496136 CREB3L3Q68CJ9 461 aa25.97■■□□□ 1.75
ECHDC3-205ENST00000496136 ARPP21Q9UBL0 812 aaPredicted RBP25.96■■□□□ 1.75
ECHDC3-205ENST00000496136 SCAF8Q9UPN6 1271 aaKnown RBP25.96■■□□□ 1.75
ECHDC3-205ENST00000496136 CYP2D7A0A087X1C5 515 aa25.95■■□□□ 1.75
ECHDC3-205ENST00000496136 MINDY4BA8MYZ0 360 aa25.95■■□□□ 1.75
ECHDC3-205ENST00000496136 ZNF213O14771 459 aa25.95■■□□□ 1.75
ECHDC3-205ENST00000496136 SLC27A2O14975 620 aa25.95■■□□□ 1.75
ECHDC3-205ENST00000496136 HAND2P61296 217 aa25.95■■□□□ 1.75
ECHDC3-205ENST00000496136 IMMTQ16891 758 aaKnown RBP25.95■■□□□ 1.75
ECHDC3-205ENST00000496136 FAM83AQ86UY5 434 aa25.95■■□□□ 1.75
ECHDC3-205ENST00000496136 PNMA8AQ86V59 439 aaPredicted RBP25.95■■□□□ 1.75
ECHDC3-205ENST00000496136 FAM151AQ8WW52 585 aa25.95■■□□□ 1.75
ECHDC3-205ENST00000496136 CNTNAP1P78357 1384 aa25.95■■□□□ 1.74
ECHDC3-205ENST00000496136 NAV1Q8NEY1 1877 aa25.95■■□□□ 1.74
ECHDC3-205ENST00000496136 SMIM22K7EJ46 135 aa25.95■■□□□ 1.74
ECHDC3-205ENST00000496136 CYP2D6P10635 497 aa25.95■■□□□ 1.74
ECHDC3-205ENST00000496136 C12orf60Q5U649 245 aa25.95■■□□□ 1.74
ECHDC3-205ENST00000496136 ZNF526Q8TF50 670 aaPredicted RBP25.95■■□□□ 1.74
ECHDC3-205ENST00000496136 KCNB2Q92953 911 aa25.95■■□□□ 1.74
ECHDC3-205ENST00000496136 GGA3Q9NZ52 723 aa25.95■■□□□ 1.74
ECHDC3-205ENST00000496136 POLR3DP05423 398 aaPredicted RBP25.94■■□□□ 1.74
ECHDC3-205ENST00000496136 MCCP23508 829 aa25.94■■□□□ 1.74
ECHDC3-205ENST00000496136 PLCD1P51178 756 aa25.94■■□□□ 1.74
ECHDC3-205ENST00000496136 EVX2Q03828 476 aa25.94■■□□□ 1.74
ECHDC3-205ENST00000496136 SLC4A8Q2Y0W8 1093 aa25.94■■□□□ 1.74
ECHDC3-205ENST00000496136 RNF20Q5VTR2 975 aa25.94■■□□□ 1.74
ECHDC3-205ENST00000496136 SH3BP5LQ7L8J4 393 aa25.94■■□□□ 1.74
ECHDC3-205ENST00000496136 RASEFQ8IZ41 740 aa25.94■■□□□ 1.74
ECHDC3-205ENST00000496136 RBM25P49756 843 aaKnown RBP25.93■■□□□ 1.74
ECHDC3-205ENST00000496136 PPARAQ07869 468 aa25.93■■□□□ 1.74
ECHDC3-205ENST00000496136 TNFAIP1Q13829 316 aa25.93■■□□□ 1.74
ECHDC3-205ENST00000496136 EAPPQ56P03 285 aaPredicted RBP25.93■■□□□ 1.74
ECHDC3-205ENST00000496136 ZC3H15Q8WU90 426 aaKnown RBP25.93■■□□□ 1.74
ECHDC3-205ENST00000496136 TBC1D32Q96NH3 1257 aa25.93■■□□□ 1.74
ECHDC3-205ENST00000496136 DHX36Q9H2U1 1008 aaKnown RBP25.93■■□□□ 1.74
ECHDC3-205ENST00000496136 NMRK2Q9NPI5 230 aa25.93■■□□□ 1.74
ECHDC3-205ENST00000496136 TAF6LQ9Y6J9 622 aa25.93■■□□□ 1.74
ECHDC3-205ENST00000496136 DDTLA6NHG4 134 aaPredicted RBP25.92■■□□□ 1.74
ECHDC3-205ENST00000496136 TNNI2P48788 182 aa25.92■■□□□ 1.74
ECHDC3-205ENST00000496136 RASA3Q14644 834 aa25.92■■□□□ 1.74
ECHDC3-205ENST00000496136 NBPF3Q9H094 633 aa25.92■■□□□ 1.74
ECHDC3-205ENST00000496136 PGAP2Q9UHJ9 254 aa25.92■■□□□ 1.74
ECHDC3-205ENST00000496136 ANAPC4Q9UJX5 808 aa25.92■■□□□ 1.74
ECHDC3-205ENST00000496136 DDX60LQ5H9U9 1706 aaKnown RBP25.92■■□□□ 1.74
ECHDC3-205ENST00000496136 TTC6Q86TZ1 520 aa25.92■■□□□ 1.74
ECHDC3-205ENST00000496136 APOBEC3FQ8IUX4 373 aaKnown RBP25.92■■□□□ 1.74
ECHDC3-205ENST00000496136 ZSCAN29Q8IWY8 852 aaPredicted RBP25.92■■□□□ 1.74
ECHDC3-205ENST00000496136 AMOTL1Q8IY63 956 aa25.92■■□□□ 1.74
ECHDC3-205ENST00000496136 TMEM39BQ9GZU3 492 aa25.92■■□□□ 1.74
ECHDC3-205ENST00000496136 DEFB129Q9H1M3 183 aa25.92■■□□□ 1.74
ECHDC3-205ENST00000496136 PITPNM2Q9BZ72 1349 aa25.91■■□□□ 1.74
ECHDC3-205ENST00000496136 ZKSCAN1P17029 563 aaPredicted RBP25.91■■□□□ 1.74
ECHDC3-205ENST00000496136 CTDSPL2Q05D32 466 aa25.91■■□□□ 1.74
ECHDC3-205ENST00000496136 TSGA10IPQ3SY00 556 aa25.91■■□□□ 1.74
ECHDC3-205ENST00000496136 SNX14Q9Y5W7 946 aa25.91■■□□□ 1.74
ECHDC3-205ENST00000496136 ATRNL1Q5VV63 1379 aa25.9■■□□□ 1.74
ECHDC3-205ENST00000496136 DCPSQ96C86 337 aaKnown RBP25.9■■□□□ 1.74
ECHDC3-205ENST00000496136 STK11IPQ8N1F8 1099 aa25.89■■□□□ 1.73
ECHDC3-205ENST00000496136 PI4KBQ9UBF8 816 aa25.89■■□□□ 1.73
ECHDC3-205ENST00000496136 COL2A1P02458 1487 aaPredicted RBP25.89■■□□□ 1.73
ECHDC3-205ENST00000496136 LAMA4Q16363 1823 aa25.88■■□□□ 1.73
ECHDC3-205ENST00000496136 POTEIP0CG38 1075 aa25.88■■□□□ 1.73
ECHDC3-205ENST00000496136 POTEJP0CG39 1038 aa25.88■■□□□ 1.73
ECHDC3-205ENST00000496136 ANAPC15P60006 121 aa25.88■■□□□ 1.73
ECHDC3-205ENST00000496136 TBC1D10CQ8IV04 446 aa25.88■■□□□ 1.73
ECHDC3-205ENST00000496136 TEPSINQ96N21 525 aa25.88■■□□□ 1.73
ECHDC3-205ENST00000496136 INCENPQ9NQS7 918 aa25.88■■□□□ 1.73
ECHDC3-205ENST00000496136 TACC3Q9Y6A5 838 aa25.88■■□□□ 1.73
ECHDC3-205ENST00000496136 HLA-DOAP06340 250 aa25.87■■□□□ 1.73
ECHDC3-205ENST00000496136 CDAN1Q8IWY9 1227 aa25.87■■□□□ 1.73
ECHDC3-205ENST00000496136 DYNLL2Q96FJ2 89 aa25.87■■□□□ 1.73
ECHDC3-205ENST00000496136 CSRNP1Q96S65 589 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms