RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 SBK1Q52WX2 424 aa19.27■□□□□ 0.67
HLA-A-208ENST00000496081 PODNQ7Z5L7 613 aa19.27■□□□□ 0.67
HLA-A-208ENST00000496081 SMARCC2Q8TAQ2 1214 aa19.27■□□□□ 0.67
HLA-A-208ENST00000496081 FBXW7Q969H0 707 aa19.27■□□□□ 0.67
HLA-A-208ENST00000496081 DBNDD1Q9H9R9 158 aa19.27■□□□□ 0.67
HLA-A-208ENST00000496081 HPS5Q9UPZ3 1129 aa19.27■□□□□ 0.67
HLA-A-208ENST00000496081 SUGT1Q9Y2Z0 365 aa19.27■□□□□ 0.67
HLA-A-208ENST00000496081 LAMB1P07942 1786 aa19.26■□□□□ 0.67
HLA-A-208ENST00000496081 C21orf2O43822 256 aa19.26■□□□□ 0.67
HLA-A-208ENST00000496081 FGRP09769 529 aa19.26■□□□□ 0.67
HLA-A-208ENST00000496081 KCNA3P22001 575 aa19.26■□□□□ 0.67
HLA-A-208ENST00000496081 BTDP43251 543 aa19.26■□□□□ 0.67
HLA-A-208ENST00000496081 LARP1BQ659C4 914 aaKnown RBP19.26■□□□□ 0.67
HLA-A-208ENST00000496081 SLF2Q8IX21 1173 aa19.26■□□□□ 0.67
HLA-A-208ENST00000496081 TTLL6Q8N841 843 aa19.26■□□□□ 0.67
HLA-A-208ENST00000496081 NSUN7Q8NE18 718 aaKnown RBP19.26■□□□□ 0.67
HLA-A-208ENST00000496081 CHAMP1Q96JM3 812 aa19.26■□□□□ 0.67
HLA-A-208ENST00000496081 ARPP21Q9UBL0 812 aaPredicted RBP19.26■□□□□ 0.67
HLA-A-208ENST00000496081 GAKO14976 1311 aa19.26■□□□□ 0.67
HLA-A-208ENST00000496081 DPEP1P16444 411 aa19.25■□□□□ 0.67
HLA-A-208ENST00000496081 EVX2Q03828 476 aa19.25■□□□□ 0.67
HLA-A-208ENST00000496081 MCTP1Q6DN14 999 aa19.25■□□□□ 0.67
HLA-A-208ENST00000496081 CERS3Q8IU89 383 aa19.25■□□□□ 0.67
HLA-A-208ENST00000496081 LY9Q9HBG7 655 aa19.25■□□□□ 0.67
HLA-A-208ENST00000496081 SENP2Q9HC62 589 aa19.25■□□□□ 0.67
HLA-A-208ENST00000496081 MTMR6Q9Y217 621 aa19.25■□□□□ 0.67
HLA-A-208ENST00000496081 GOLGA8BA8MQT2 603 aa19.24■□□□□ 0.67
HLA-A-208ENST00000496081 GOLGA6L22H0YM25 854 aa19.24■□□□□ 0.67
HLA-A-208ENST00000496081 PDCP20941 246 aa19.24■□□□□ 0.67
HLA-A-208ENST00000496081 USP5P45974 858 aa19.24■□□□□ 0.67
HLA-A-208ENST00000496081 TMEM67Q5HYA8 995 aa19.24■□□□□ 0.67
HLA-A-208ENST00000496081 CHMP4CQ96CF2 233 aa19.24■□□□□ 0.67
HLA-A-208ENST00000496081 MXD3Q9BW11 206 aa19.24■□□□□ 0.67
HLA-A-208ENST00000496081 KCNQ5Q9NR82 932 aa19.24■□□□□ 0.67
HLA-A-208ENST00000496081 MCM9Q9NXL9 1143 aa19.24■□□□□ 0.67
HLA-A-208ENST00000496081 CDK5RAP2Q96SN8 1893 aa19.24■□□□□ 0.67
HLA-A-208ENST00000496081 IFIT3O14879 490 aaKnown RBP19.24■□□□□ 0.67
HLA-A-208ENST00000496081 CYP2D6P10635 497 aa19.24■□□□□ 0.67
HLA-A-208ENST00000496081 PCP11498 1178 aaKnown RBP19.24■□□□□ 0.67
HLA-A-208ENST00000496081 PDIA4P13667 645 aaKnown RBP19.24■□□□□ 0.67
HLA-A-208ENST00000496081 LIFRP42702 1097 aa19.24■□□□□ 0.67
HLA-A-208ENST00000496081 SGMS1Q86VZ5 419 aa19.24■□□□□ 0.67
HLA-A-208ENST00000496081 ESR2Q92731 530 aa19.24■□□□□ 0.67
HLA-A-208ENST00000496081 MTA3Q9BTC8 594 aa19.24■□□□□ 0.67
HLA-A-208ENST00000496081 F13A1P00488 732 aa19.23■□□□□ 0.67
HLA-A-208ENST00000496081 USP17L8P0C7I0 530 aa19.23■□□□□ 0.67
HLA-A-208ENST00000496081 POLD1P28340 1107 aa19.23■□□□□ 0.67
HLA-A-208ENST00000496081 RHBDL3P58872 404 aa19.23■□□□□ 0.67
HLA-A-208ENST00000496081 APOA5Q6Q788 366 aa19.23■□□□□ 0.67
HLA-A-208ENST00000496081 TGFBRAP1Q8WUH2 860 aa19.23■□□□□ 0.67
HLA-A-208ENST00000496081 DDX11Q96FC9 970 aa19.23■□□□□ 0.67
HLA-A-208ENST00000496081 SPON1Q9HCB6 807 aa19.23■□□□□ 0.67
HLA-A-208ENST00000496081 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.23■□□□□ 0.67
HLA-A-208ENST00000496081 DAGLAQ9Y4D2 1042 aa19.23■□□□□ 0.67
HLA-A-208ENST00000496081 PTPDC1A2A3K4 754 aa19.22■□□□□ 0.67
HLA-A-208ENST00000496081 VPS37CA5D8V6 355 aaPredicted RBP19.22■□□□□ 0.67
HLA-A-208ENST00000496081 TRAK2O60296 914 aa19.22■□□□□ 0.67
HLA-A-208ENST00000496081 ECE2O60344 883 aa19.22■□□□□ 0.67
HLA-A-208ENST00000496081 PTMSP20962 102 aa19.22■□□□□ 0.67
HLA-A-208ENST00000496081 PTGER2P43116 358 aa19.22■□□□□ 0.67
HLA-A-208ENST00000496081 AOC3Q16853 763 aa19.22■□□□□ 0.67
HLA-A-208ENST00000496081 RAB11FIP4Q86YS3 637 aa19.22■□□□□ 0.67
HLA-A-208ENST00000496081 SUPT20HQ8NEM7 779 aa19.22■□□□□ 0.67
HLA-A-208ENST00000496081 ZKSCAN3Q9BRR0 538 aa19.22■□□□□ 0.67
HLA-A-208ENST00000496081 SCN9AQ15858 1988 aa19.22■□□□□ 0.67
HLA-A-208ENST00000496081 NAV1Q8NEY1 1877 aa19.22■□□□□ 0.67
HLA-A-208ENST00000496081 F8W031 263 aaPredicted RBP19.21■□□□□ 0.67
HLA-A-208ENST00000496081 PRDM1O75626 825 aa19.21■□□□□ 0.67
HLA-A-208ENST00000496081 PLCG2P16885 1265 aa19.21■□□□□ 0.67
HLA-A-208ENST00000496081 HMGN5P82970 282 aaKnown RBP19.21■□□□□ 0.67
HLA-A-208ENST00000496081 KIAA2012Q0VF49 1180 aa19.21■□□□□ 0.67
HLA-A-208ENST00000496081 SART3Q15020 963 aaKnown RBP19.21■□□□□ 0.67
HLA-A-208ENST00000496081 GRIPAP1Q4V328 841 aa19.21■□□□□ 0.67
HLA-A-208ENST00000496081 C12orf60Q5U649 245 aa19.21■□□□□ 0.67
HLA-A-208ENST00000496081 SGIP1Q9BQI5 828 aa19.21■□□□□ 0.67
HLA-A-208ENST00000496081 TTF2Q9UNY4 1162 aaKnown RBP19.21■□□□□ 0.67
HLA-A-208ENST00000496081 ORC4O43929 436 aa19.21■□□□□ 0.67
HLA-A-208ENST00000496081 DHX16O60231 1041 aaKnown RBP19.21■□□□□ 0.67
HLA-A-208ENST00000496081 CCDC93Q567U6 631 aa19.21■□□□□ 0.67
HLA-A-208ENST00000496081 STRIP1Q5VSL9 837 aa19.21■□□□□ 0.67
HLA-A-208ENST00000496081 NFXL1Q6ZNB6 911 aa19.21■□□□□ 0.67
HLA-A-208ENST00000496081 MAPKAPK5Q8IW41 473 aa19.21■□□□□ 0.67
HLA-A-208ENST00000496081 TEX11Q8IYF3 940 aa19.21■□□□□ 0.67
HLA-A-208ENST00000496081 ZNF646O15015 1829 aaPredicted RBP19.21■□□□□ 0.66
HLA-A-208ENST00000496081 SLC3A2P08195 630 aaKnown RBP19.2■□□□□ 0.66
HLA-A-208ENST00000496081 WTAPQ15007 396 aa19.2■□□□□ 0.66
HLA-A-208ENST00000496081 CDC37L1Q7L3B6 337 aa19.2■□□□□ 0.66
HLA-A-208ENST00000496081 FAM184AQ8NB25 1140 aa19.2■□□□□ 0.66
HLA-A-208ENST00000496081 ERICH2A1L162 156 aa19.19■□□□□ 0.66
HLA-A-208ENST00000496081 CCDC69A6NI79 296 aa19.19■□□□□ 0.66
HLA-A-208ENST00000496081 RANBP6O60518 1105 aaKnown RBP19.19■□□□□ 0.66
HLA-A-208ENST00000496081 FKBP1AP62942 108 aaKnown RBP19.19■□□□□ 0.66
HLA-A-208ENST00000496081 SLC4A8Q2Y0W8 1093 aa19.19■□□□□ 0.66
HLA-A-208ENST00000496081 FOXD4L6Q3SYB3 417 aaPredicted RBP19.19■□□□□ 0.66
HLA-A-208ENST00000496081 DACT2Q5SW24 774 aa19.19■□□□□ 0.66
HLA-A-208ENST00000496081 FOXD4L3Q6VB84 417 aaPredicted RBP19.19■□□□□ 0.66
HLA-A-208ENST00000496081 RTKN2Q8IZC4 609 aa19.19■□□□□ 0.66
HLA-A-208ENST00000496081 UBAC1Q9BSL1 405 aa19.19■□□□□ 0.66
HLA-A-208ENST00000496081 LMBRD1Q9NUN5 540 aa19.19■□□□□ 0.66
HLA-A-208ENST00000496081 ZBTB43O43298 467 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms