RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 ZNF862O60290 1169 aa8.22□□□□□ -1.09
SSR3-208ENST00000496050 GIPRP48546 466 aa8.22□□□□□ -1.09
SSR3-208ENST00000496050 CLCQ05315 142 aa8.22□□□□□ -1.09
SSR3-208ENST00000496050 TRIM28Q13263 835 aaKnown RBP8.22□□□□□ -1.09
SSR3-208ENST00000496050 MLECQ14165 292 aa8.22□□□□□ -1.09
SSR3-208ENST00000496050 KIF4BQ2VIQ3 1234 aa8.22□□□□□ -1.09
SSR3-208ENST00000496050 TNNI3KQ59H18 835 aa8.22□□□□□ -1.09
SSR3-208ENST00000496050 CCDC81Q6ZN84 652 aa8.22□□□□□ -1.09
SSR3-208ENST00000496050 SHDQ96IW2 340 aa8.22□□□□□ -1.09
SSR3-208ENST00000496050 ZSWIM4Q9H7M6 989 aa8.22□□□□□ -1.09
SSR3-208ENST00000496050 SYNGAP1Q96PV0 1343 aa8.22□□□□□ -1.09
SSR3-208ENST00000496050 A0A0A0MRY4 1105 aa8.21□□□□□ -1.1
SSR3-208ENST00000496050 U2SURPO15042 1029 aaKnown RBP8.21□□□□□ -1.1
SSR3-208ENST00000496050 AOC2O75106 756 aa8.21□□□□□ -1.1
SSR3-208ENST00000496050 CTSBP07858 339 aa8.21□□□□□ -1.1
SSR3-208ENST00000496050 HOXB4P17483 251 aaPredicted RBP8.21□□□□□ -1.1
SSR3-208ENST00000496050 PDE4BQ07343 736 aa8.21□□□□□ -1.1
SSR3-208ENST00000496050 INPP5AQ14642 412 aa8.21□□□□□ -1.1
SSR3-208ENST00000496050 WIPI1Q5MNZ9 446 aaPredicted RBP8.21□□□□□ -1.1
SSR3-208ENST00000496050 ZNF385CQ66K41 422 aaPredicted RBP8.21□□□□□ -1.1
SSR3-208ENST00000496050 TREML4Q6UXN2 200 aa8.21□□□□□ -1.1
SSR3-208ENST00000496050 SVOPQ8N4V2 548 aa8.21□□□□□ -1.1
SSR3-208ENST00000496050 RBBP8NLQ8NC74 664 aaPredicted RBP8.21□□□□□ -1.1
SSR3-208ENST00000496050 ZNF775Q96BV0 537 aaPredicted RBP8.21□□□□□ -1.1
SSR3-208ENST00000496050 PLPPR2Q96GM1 343 aa8.21□□□□□ -1.1
SSR3-208ENST00000496050 PLVAPQ9BX97 442 aa8.21□□□□□ -1.1
SSR3-208ENST00000496050 TRIM55Q9BYV6 548 aa8.21□□□□□ -1.1
SSR3-208ENST00000496050 KCNK4Q9NYG8 393 aa8.21□□□□□ -1.1
SSR3-208ENST00000496050 ZNRF3Q9ULT6 936 aa8.21□□□□□ -1.1
SSR3-208ENST00000496050 POLR3KQ9Y2Y1 108 aaPredicted RBP8.21□□□□□ -1.1
SSR3-208ENST00000496050 DLL1O00548 723 aa8.2□□□□□ -1.1
SSR3-208ENST00000496050 GRIN3BO60391 1043 aa8.2□□□□□ -1.1
SSR3-208ENST00000496050 ADAM11O75078 769 aa8.2□□□□□ -1.1
SSR3-208ENST00000496050 CDK8P49336 464 aa8.2□□□□□ -1.1
SSR3-208ENST00000496050 FOXD4L6Q3SYB3 417 aaPredicted RBP8.2□□□□□ -1.1
SSR3-208ENST00000496050 ZC3H12AQ5D1E8 599 aaKnown RBP8.2□□□□□ -1.1
SSR3-208ENST00000496050 LRFN4Q6PJG9 635 aa8.2□□□□□ -1.1
SSR3-208ENST00000496050 FOXD4L3Q6VB84 417 aaPredicted RBP8.2□□□□□ -1.1
SSR3-208ENST00000496050 LINC00114Q6XXX2 140 aa8.2□□□□□ -1.1
SSR3-208ENST00000496050 FMR1NBQ8N0W7 255 aaPredicted RBP8.2□□□□□ -1.1
SSR3-208ENST00000496050 WDR89Q96FK6 387 aaPredicted RBP8.2□□□□□ -1.1
SSR3-208ENST00000496050 OSBPL2Q9H1P3 480 aa8.2□□□□□ -1.1
SSR3-208ENST00000496050 SIRPGQ9P1W8 387 aa8.2□□□□□ -1.1
SSR3-208ENST00000496050 PRR36Q9H6K5 1346 aa8.2□□□□□ -1.1
SSR3-208ENST00000496050 MEGF11A6BM72 1044 aa8.19□□□□□ -1.1
SSR3-208ENST00000496050 DCDC2CA8MYV0 355 aa8.19□□□□□ -1.1
SSR3-208ENST00000496050 SMAD7O15105 426 aaKnown RBP8.19□□□□□ -1.1
SSR3-208ENST00000496050 NFE2L2Q16236 605 aa8.19□□□□□ -1.1
SSR3-208ENST00000496050 LCE2CQ5TA81 110 aa8.19□□□□□ -1.1
SSR3-208ENST00000496050 IGF2-ASQ6U949 168 aa8.19□□□□□ -1.1
SSR3-208ENST00000496050 CYFIP1Q7L576 1253 aa8.19□□□□□ -1.1
SSR3-208ENST00000496050 MKL2Q9ULH7 1088 aa8.19□□□□□ -1.1
SSR3-208ENST00000496050 GNB5O14775 395 aa8.18□□□□□ -1.1
SSR3-208ENST00000496050 KLF4O43474 513 aa8.18□□□□□ -1.1
SSR3-208ENST00000496050 DLGAP3O95886 979 aa8.18□□□□□ -1.1
SSR3-208ENST00000496050 RAB33AQ14088 237 aa8.18□□□□□ -1.1
SSR3-208ENST00000496050 NUTM2GQ5VZR2 741 aa8.18□□□□□ -1.1
SSR3-208ENST00000496050 C12orf40Q86WS4 652 aa8.18□□□□□ -1.1
SSR3-208ENST00000496050 MKL1Q969V6 931 aa8.18□□□□□ -1.1
SSR3-208ENST00000496050 TRIM11Q96F44 468 aa8.18□□□□□ -1.1
SSR3-208ENST00000496050 WDR18Q9BV38 432 aa8.18□□□□□ -1.1
SSR3-208ENST00000496050 RUSC1Q9BVN2 902 aa8.18□□□□□ -1.1
SSR3-208ENST00000496050 PICK1Q9NRD5 415 aa8.18□□□□□ -1.1
SSR3-208ENST00000496050 ARHGEF15O94989 841 aa8.17□□□□□ -1.1
SSR3-208ENST00000496050 HTR3BO95264 441 aa8.17□□□□□ -1.1
SSR3-208ENST00000496050 SELPP16109 830 aa8.17□□□□□ -1.1
SSR3-208ENST00000496050 PLCG1P19174 1290 aa8.17□□□□□ -1.1
SSR3-208ENST00000496050 CANXP27824 592 aaKnown RBP8.17□□□□□ -1.1
SSR3-208ENST00000496050 ERVK-24P63145 666 aa8.17□□□□□ -1.1
SSR3-208ENST00000496050 ID3Q02535 119 aa8.17□□□□□ -1.1
SSR3-208ENST00000496050 TMPRSS13Q9BYE2 586 aa8.17□□□□□ -1.1
SSR3-208ENST00000496050 CYP4F12Q9HCS2 524 aa8.17□□□□□ -1.1
SSR3-208ENST00000496050 CSADQ9Y600 493 aa8.17□□□□□ -1.1
SSR3-208ENST00000496050 FANCGO15287 622 aa8.16□□□□□ -1.1
SSR3-208ENST00000496050 SMARCA5O60264 1052 aaPredicted RBP8.16□□□□□ -1.1
SSR3-208ENST00000496050 CASP7P55210 303 aa8.16□□□□□ -1.1
SSR3-208ENST00000496050 SNRPNP63162 240 aaKnown RBP8.16□□□□□ -1.1
SSR3-208ENST00000496050 PRRT3Q5FWE3 981 aa8.16□□□□□ -1.1
SSR3-208ENST00000496050 AKAP4Q5JQC9 854 aa8.16□□□□□ -1.1
SSR3-208ENST00000496050 UBASH3BQ8TF42 649 aa8.16□□□□□ -1.1
SSR3-208ENST00000496050 MRFAP1L1Q96HT8 127 aa8.16□□□□□ -1.1
SSR3-208ENST00000496050 WNT10AQ9GZT5 417 aa8.16□□□□□ -1.1
SSR3-208ENST00000496050 MRPL18Q9H0U6 180 aaKnown RBP8.16□□□□□ -1.1
SSR3-208ENST00000496050 RNF208Q9H0X6 261 aa8.16□□□□□ -1.1
SSR3-208ENST00000496050 HIF3AQ9Y2N7 669 aa8.16□□□□□ -1.1
SSR3-208ENST00000496050 CORINQ9Y5Q5 1042 aa8.16□□□□□ -1.1
SSR3-208ENST00000496050 PRAMEF27A3QJZ7 478 aa8.15□□□□□ -1.1
SSR3-208ENST00000496050 K7ELQ4 463 aaPredicted RBP8.15□□□□□ -1.1
SSR3-208ENST00000496050 PGRP06401 933 aa8.15□□□□□ -1.1
SSR3-208ENST00000496050 ELNP15502 786 aa8.15□□□□□ -1.1
SSR3-208ENST00000496050 ETF1P62495 437 aaKnown RBP8.15□□□□□ -1.1
SSR3-208ENST00000496050 RING1Q06587 406 aa8.15□□□□□ -1.1
SSR3-208ENST00000496050 PPP2R5EQ16537 467 aa8.15□□□□□ -1.1
SSR3-208ENST00000496050 TMEM201Q5SNT2 666 aa8.15□□□□□ -1.1
SSR3-208ENST00000496050 GIMAP6Q6P9H5 292 aa8.15□□□□□ -1.1
SSR3-208ENST00000496050 BEND7Q8N7W2 519 aaPredicted RBP8.15□□□□□ -1.1
SSR3-208ENST00000496050 FAM169BQ8N8A8 192 aa8.15□□□□□ -1.1
SSR3-208ENST00000496050 HNRNPLLQ8WVV9 542 aaKnown RBP8.15□□□□□ -1.1
SSR3-208ENST00000496050 TM9SF2Q99805 663 aa8.15□□□□□ -1.1
SSR3-208ENST00000496050 SUGCTQ9HAC7 445 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms