RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 SLC9C2Q5TAH2 1124 aa20.79■□□□□ 0.92
SNX17-209ENST00000494893 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.79■□□□□ 0.92
SNX17-209ENST00000494893 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.79■□□□□ 0.92
SNX17-209ENST00000494893 CCDC102AQ96A19 550 aa20.79■□□□□ 0.92
SNX17-209ENST00000494893 RIOK1Q9BRS2 568 aaKnown RBP20.79■□□□□ 0.92
SNX17-209ENST00000494893 TTC41PQ6P2S7 1318 aa20.78■□□□□ 0.92
SNX17-209ENST00000494893 ZNF532Q9HCE3 1301 aa20.78■□□□□ 0.92
SNX17-209ENST00000494893 BAG3O95817 575 aa20.78■□□□□ 0.92
SNX17-209ENST00000494893 MX1P20591 662 aa20.78■□□□□ 0.92
SNX17-209ENST00000494893 MAP2K2P36507 400 aa20.78■□□□□ 0.92
SNX17-209ENST00000494893 NOGQ13253 232 aa20.78■□□□□ 0.92
SNX17-209ENST00000494893 B4GALNT3Q6L9W6 998 aa20.78■□□□□ 0.92
SNX17-209ENST00000494893 MIGA2Q7L4E1 593 aa20.78■□□□□ 0.92
SNX17-209ENST00000494893 LNPKQ9C0E8 428 aa20.78■□□□□ 0.92
SNX17-209ENST00000494893 WBP1LQ9NX94 342 aa20.78■□□□□ 0.92
SNX17-209ENST00000494893 HSPA1AP0DMV8 641 aaKnown RBP20.77■□□□□ 0.92
SNX17-209ENST00000494893 HSPA1BP0DMV9 641 aaKnown RBP20.77■□□□□ 0.92
SNX17-209ENST00000494893 ADD2P35612 726 aa20.77■□□□□ 0.92
SNX17-209ENST00000494893 IREB2P48200 963 aaKnown RBP20.77■□□□□ 0.92
SNX17-209ENST00000494893 KIF23Q02241 960 aaPredicted RBP20.77■□□□□ 0.92
SNX17-209ENST00000494893 TMED8Q6PL24 325 aaPredicted RBP20.77■□□□□ 0.92
SNX17-209ENST00000494893 GPATCH3Q96I76 525 aa20.77■□□□□ 0.92
SNX17-209ENST00000494893 CCDC136Q96JN2 1154 aa20.77■□□□□ 0.92
SNX17-209ENST00000494893 OSBPL5Q9H0X9 879 aaPredicted RBP20.77■□□□□ 0.92
SNX17-209ENST00000494893 STAP2Q9UGK3 403 aa20.77■□□□□ 0.92
SNX17-209ENST00000494893 COL2A1P02458 1487 aaPredicted RBP20.76■□□□□ 0.91
SNX17-209ENST00000494893 GJA5P36382 358 aa20.76■□□□□ 0.91
SNX17-209ENST00000494893 MAP3K10Q02779 954 aa20.76■□□□□ 0.91
SNX17-209ENST00000494893 NUCB1Q02818 461 aa20.76■□□□□ 0.91
SNX17-209ENST00000494893 CSRNP1Q96S65 589 aa20.76■□□□□ 0.91
SNX17-209ENST00000494893 NOL10Q9BSC4 688 aaKnown RBP20.76■□□□□ 0.91
SNX17-209ENST00000494893 FLT1P17948 1338 aa20.76■□□□□ 0.91
SNX17-209ENST00000494893 CDK5RAP2Q96SN8 1893 aa20.75■□□□□ 0.91
SNX17-209ENST00000494893 UNCXA6NJT0 531 aa20.75■□□□□ 0.91
SNX17-209ENST00000494893 PLCG2P16885 1265 aa20.75■□□□□ 0.91
SNX17-209ENST00000494893 PDE1AP54750 535 aa20.75■□□□□ 0.91
SNX17-209ENST00000494893 MAP3K9P80192 1104 aa20.75■□□□□ 0.91
SNX17-209ENST00000494893 VGLL4Q14135 290 aa20.75■□□□□ 0.91
SNX17-209ENST00000494893 MAPKAPK5Q8IW41 473 aa20.75■□□□□ 0.91
SNX17-209ENST00000494893 ANKRD13AQ8IZ07 590 aa20.75■□□□□ 0.91
SNX17-209ENST00000494893 TGFBRAP1Q8WUH2 860 aa20.75■□□□□ 0.91
SNX17-209ENST00000494893 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.75■□□□□ 0.91
SNX17-209ENST00000494893 ZNF112Q9UJU3 913 aa20.75■□□□□ 0.91
SNX17-209ENST00000494893 GLRX3O76003 335 aaKnown RBP20.74■□□□□ 0.91
SNX17-209ENST00000494893 INPP5BP32019 993 aa20.74■□□□□ 0.91
SNX17-209ENST00000494893 MKRN3Q13064 507 aaKnown RBP20.74■□□□□ 0.91
SNX17-209ENST00000494893 SPRYD7Q5W111 196 aa20.74■□□□□ 0.91
SNX17-209ENST00000494893 CHD1LQ86WJ1 897 aa20.74■□□□□ 0.91
SNX17-209ENST00000494893 KBTBD3Q8NAB2 608 aa20.74■□□□□ 0.91
SNX17-209ENST00000494893 CNKSR2Q8WXI2 1034 aa20.74■□□□□ 0.91
SNX17-209ENST00000494893 ZKSCAN4Q969J2 545 aaPredicted RBP20.74■□□□□ 0.91
SNX17-209ENST00000494893 SLC10A4Q96EP9 437 aa20.74■□□□□ 0.91
SNX17-209ENST00000494893 WNK4Q96J92 1243 aa20.74■□□□□ 0.91
SNX17-209ENST00000494893 WRNIP1Q96S55 665 aa20.74■□□□□ 0.91
SNX17-209ENST00000494893 ZNF341Q9BYN7 854 aa20.74■□□□□ 0.91
SNX17-209ENST00000494893 ELP3Q9H9T3 547 aa20.74■□□□□ 0.91
SNX17-209ENST00000494893 SNCAIPQ9Y6H5 919 aa20.74■□□□□ 0.91
SNX17-209ENST00000494893 FOCADQ5VW36 1801 aa20.74■□□□□ 0.91
SNX17-209ENST00000494893 PHF20L1A8MW92 1017 aa20.73■□□□□ 0.91
SNX17-209ENST00000494893 DCAF15Q66K64 600 aa20.73■□□□□ 0.91
SNX17-209ENST00000494893 ZSCAN29Q8IWY8 852 aaPredicted RBP20.73■□□□□ 0.91
SNX17-209ENST00000494893 LCORLQ8N3X6 602 aa20.73■□□□□ 0.91
SNX17-209ENST00000494893 HOOK2Q96ED9 719 aa20.73■□□□□ 0.91
SNX17-209ENST00000494893 SIPA1L1O43166 1804 aa20.73■□□□□ 0.91
SNX17-209ENST00000494893 MAGEB6P1A0A0J9YX57 407 aa20.72■□□□□ 0.91
SNX17-209ENST00000494893 ERC2O15083 957 aa20.72■□□□□ 0.91
SNX17-209ENST00000494893 FOXN1O15353 648 aa20.72■□□□□ 0.91
SNX17-209ENST00000494893 UBE3CQ15386 1083 aa20.72■□□□□ 0.91
SNX17-209ENST00000494893 FAM196BA6NMK8 535 aa20.71■□□□□ 0.91
SNX17-209ENST00000494893 MAP2K1Q02750 393 aaPredicted RBP20.71■□□□□ 0.91
SNX17-209ENST00000494893 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.71■□□□□ 0.918e-8■■■■□ 25
SNX17-209ENST00000494893 ARMT1Q9H993 441 aa20.71■□□□□ 0.91
SNX17-209ENST00000494893 ZBTB47Q9UFB7 747 aaPredicted RBP20.71■□□□□ 0.91
SNX17-209ENST00000494893 CERS3Q8IU89 383 aa20.7■□□□□ 0.9
SNX17-209ENST00000494893 PLEKHM2Q8IWE5 1019 aa20.7■□□□□ 0.9
SNX17-209ENST00000494893 PUS7LQ9H0K6 701 aaKnown RBP20.7■□□□□ 0.9
SNX17-209ENST00000494893 SAP30BPQ9UHR5 308 aaKnown RBP20.7■□□□□ 0.9
SNX17-209ENST00000494893 PALD1Q9ULE6 856 aa20.7■□□□□ 0.9
SNX17-209ENST00000494893 DDX60LQ5H9U9 1706 aaKnown RBP20.7■□□□□ 0.9
SNX17-209ENST00000494893 TBC1D12O60347 775 aa20.69■□□□□ 0.9
SNX17-209ENST00000494893 MBD4O95243 580 aa20.69■□□□□ 0.9
SNX17-209ENST00000494893 PDE4AP27815 886 aa20.69■□□□□ 0.9
SNX17-209ENST00000494893 RRP1BQ14684 758 aaKnown RBP20.69■□□□□ 0.9
SNX17-209ENST00000494893 OPTNQ96CV9 577 aa20.69■□□□□ 0.9
SNX17-209ENST00000494893 DNAJC18Q9H819 358 aa20.69■□□□□ 0.9
SNX17-209ENST00000494893 MYH7P12883 1935 aa20.68■□□□□ 0.9
SNX17-209ENST00000494893 SPDYE5A6NIY4 337 aa20.68■□□□□ 0.9
SNX17-209ENST00000494893 PRKAB2O43741 272 aa20.68■□□□□ 0.9
SNX17-209ENST00000494893 ZBTB48P10074 688 aaPredicted RBP20.68■□□□□ 0.9
SNX17-209ENST00000494893 EVX2Q03828 476 aa20.68■□□□□ 0.9
SNX17-209ENST00000494893 SLC4A8Q2Y0W8 1093 aa20.68■□□□□ 0.9
SNX17-209ENST00000494893 NOL9Q5SY16 702 aaKnown RBP20.68■□□□□ 0.9
SNX17-209ENST00000494893 METTL16Q86W50 562 aaKnown RBP20.68■□□□□ 0.9
SNX17-209ENST00000494893 SDR42E1Q8WUS8 393 aa20.68■□□□□ 0.9
SNX17-209ENST00000494893 OSBP2Q969R2 916 aa20.68■□□□□ 0.9
SNX17-209ENST00000494893 CSADQ9Y600 493 aa20.68■□□□□ 0.9
SNX17-209ENST00000494893 LAMB1P07942 1786 aa20.67■□□□□ 0.9
SNX17-209ENST00000494893 AK9Q5TCS8 1911 aa20.67■□□□□ 0.9
SNX17-209ENST00000494893 RNF113AO15541 343 aaKnown RBP20.67■□□□□ 0.9
SNX17-209ENST00000494893 USP5P45974 858 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms