RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 FGRP09769 529 aa13.51□□□□□ -0.25
HDLBP-245ENST00000494862 GTF2IP78347 998 aa13.51□□□□□ -0.25
HDLBP-245ENST00000494862 DCAF8Q5TAQ9 597 aa13.51□□□□□ -0.25
HDLBP-245ENST00000494862 FOXD4L5Q5VV16 416 aaPredicted RBP13.51□□□□□ -0.25
HDLBP-245ENST00000494862 CTR9Q6PD62 1173 aa13.51□□□□□ -0.25
HDLBP-245ENST00000494862 NKX2-3Q8TAU0 364 aa13.51□□□□□ -0.25
HDLBP-245ENST00000494862 FOXD4L4Q8WXT5 416 aaPredicted RBP13.51□□□□□ -0.25
HDLBP-245ENST00000494862 ZSWIM5Q9P217 1185 aa13.51□□□□□ -0.25
HDLBP-245ENST00000494862 BRPF3Q9ULD4 1205 aa13.51□□□□□ -0.25
HDLBP-245ENST00000494862 NAP1L2Q9ULW6 460 aaPredicted RBP13.51□□□□□ -0.25
HDLBP-245ENST00000494862 MTMR6Q9Y217 621 aa13.51□□□□□ -0.25
HDLBP-245ENST00000494862 KIAA1551Q9HCM1 1747 aa13.5□□□□□ -0.25
HDLBP-245ENST00000494862 GAKO14976 1311 aa13.5□□□□□ -0.25
HDLBP-245ENST00000494862 GPR75-ASB3A0A0A6YYF3 556 aa13.5□□□□□ -0.25
HDLBP-245ENST00000494862 USP17L12C9JPN9 530 aa13.5□□□□□ -0.25
HDLBP-245ENST00000494862 USP17L21D6R901 530 aa13.5□□□□□ -0.25
HDLBP-245ENST00000494862 KDM4AO75164 1064 aa13.5□□□□□ -0.25
HDLBP-245ENST00000494862 PLCG2P16885 1265 aa13.5□□□□□ -0.25
HDLBP-245ENST00000494862 LIFRP42702 1097 aa13.5□□□□□ -0.25
HDLBP-245ENST00000494862 HMGN5P82970 282 aaKnown RBP13.5□□□□□ -0.25
HDLBP-245ENST00000494862 DIXDC1Q155Q3 683 aa13.5□□□□□ -0.25
HDLBP-245ENST00000494862 DOK7Q18PE1 504 aa13.5□□□□□ -0.25
HDLBP-245ENST00000494862 GRIPAP1Q4V328 841 aa13.5□□□□□ -0.25
HDLBP-245ENST00000494862 TMEM67Q5HYA8 995 aa13.5□□□□□ -0.25
HDLBP-245ENST00000494862 LARP1BQ659C4 914 aaKnown RBP13.5□□□□□ -0.25
HDLBP-245ENST00000494862 PODNQ7Z5L7 613 aa13.5□□□□□ -0.25
HDLBP-245ENST00000494862 NSUN7Q8NE18 718 aaKnown RBP13.5□□□□□ -0.25
HDLBP-245ENST00000494862 SUPT20HQ8NEM7 779 aa13.5□□□□□ -0.25
HDLBP-245ENST00000494862 IGDCC4Q8TDY8 1250 aa13.5□□□□□ -0.25
HDLBP-245ENST00000494862 INCENPQ9NQS7 918 aa13.5□□□□□ -0.25
HDLBP-245ENST00000494862 ARPP21Q9UBL0 812 aaPredicted RBP13.5□□□□□ -0.25
HDLBP-245ENST00000494862 CCDC88AQ3V6T2 1871 aa13.5□□□□□ -0.25
HDLBP-245ENST00000494862 GOLGA8BA8MQT2 603 aa13.49□□□□□ -0.25
HDLBP-245ENST00000494862 IFIT3O14879 490 aaKnown RBP13.49□□□□□ -0.25
HDLBP-245ENST00000494862 DHX16O60231 1041 aaKnown RBP13.49□□□□□ -0.25
HDLBP-245ENST00000494862 TRAK2O60296 914 aa13.49□□□□□ -0.25
HDLBP-245ENST00000494862 JAK2O60674 1132 aa13.49□□□□□ -0.25
HDLBP-245ENST00000494862 F13A1P00488 732 aa13.49□□□□□ -0.25
HDLBP-245ENST00000494862 SLC3A2P08195 630 aaKnown RBP13.49□□□□□ -0.25
HDLBP-245ENST00000494862 BTDP43251 543 aa13.49□□□□□ -0.25
HDLBP-245ENST00000494862 USP5P45974 858 aa13.49□□□□□ -0.25
HDLBP-245ENST00000494862 NT5C2P49902 561 aa13.49□□□□□ -0.25
HDLBP-245ENST00000494862 FKBP1AP62942 108 aaKnown RBP13.49□□□□□ -0.25
HDLBP-245ENST00000494862 CCT2P78371 535 aaKnown RBP13.49□□□□□ -0.25
HDLBP-245ENST00000494862 SKOR2Q2VWA4 1001 aaPredicted RBP13.49□□□□□ -0.25
HDLBP-245ENST00000494862 RRP12Q5JTH9 1297 aaKnown RBP13.49□□□□□ -0.25
HDLBP-245ENST00000494862 MCTP1Q6DN14 999 aa13.49□□□□□ -0.25
HDLBP-245ENST00000494862 CHRDL2Q6WN34 429 aa13.49□□□□□ -0.25
HDLBP-245ENST00000494862 SGMS1Q86VZ5 419 aa13.49□□□□□ -0.25
HDLBP-245ENST00000494862 SH3RF3Q8TEJ3 882 aaPredicted RBP13.49□□□□□ -0.25
HDLBP-245ENST00000494862 ESR2Q92731 530 aa13.49□□□□□ -0.25
HDLBP-245ENST00000494862 LY9Q9HBG7 655 aa13.49□□□□□ -0.25
HDLBP-245ENST00000494862 MKRN1Q9UHC7 482 aaKnown RBP13.49□□□□□ -0.25
HDLBP-245ENST00000494862 HPS5Q9UPZ3 1129 aa13.49□□□□□ -0.25
HDLBP-245ENST00000494862 KIF3AQ9Y496 699 aa13.49□□□□□ -0.25
HDLBP-245ENST00000494862 CYP2D7A0A087X1C5 515 aa13.48□□□□□ -0.25
HDLBP-245ENST00000494862 PTPDC1A2A3K4 754 aa13.48□□□□□ -0.25
HDLBP-245ENST00000494862 ORC4O43929 436 aa13.48□□□□□ -0.25
HDLBP-245ENST00000494862 CTDNEP1O95476 244 aa13.48□□□□□ -0.25
HDLBP-245ENST00000494862 SART3Q15020 963 aaKnown RBP13.48□□□□□ -0.25
HDLBP-245ENST00000494862 TMTC2Q8N394 836 aa13.48□□□□□ -0.25
HDLBP-245ENST00000494862 TTLL6Q8N841 843 aa13.48□□□□□ -0.25
HDLBP-245ENST00000494862 TOMM22Q9NS69 142 aa13.48□□□□□ -0.25
HDLBP-245ENST00000494862 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.48□□□□□ -0.25
HDLBP-245ENST00000494862 ATP6V1DQ9Y5K8 247 aa13.48□□□□□ -0.25
HDLBP-245ENST00000494862 SLX4Q8IY92 1834 aa13.48□□□□□ -0.25
HDLBP-245ENST00000494862 SNED1Q8TER0 1413 aa13.47□□□□□ -0.25
HDLBP-245ENST00000494862 DTNBO60941 627 aa13.47□□□□□ -0.25
HDLBP-245ENST00000494862 PRR29P0C7W0 189 aa13.47□□□□□ -0.25
HDLBP-245ENST00000494862 NFXL1Q6ZNB6 911 aa13.47□□□□□ -0.25
HDLBP-245ENST00000494862 CERS5Q8N5B7 392 aa13.47□□□□□ -0.25
HDLBP-245ENST00000494862 FAM184AQ8NB25 1140 aa13.47□□□□□ -0.25
HDLBP-245ENST00000494862 FBXW7Q969H0 707 aa13.47□□□□□ -0.25
HDLBP-245ENST00000494862 NCOA5Q9HCD5 579 aaKnown RBP13.47□□□□□ -0.25
HDLBP-245ENST00000494862 MCM9Q9NXL9 1143 aa13.47□□□□□ -0.25
HDLBP-245ENST00000494862 ERICH2A1L162 156 aa13.46□□□□□ -0.25
HDLBP-245ENST00000494862 VPS37CA5D8V6 355 aaPredicted RBP13.46□□□□□ -0.25
HDLBP-245ENST00000494862 CCDC69A6NI79 296 aa13.46□□□□□ -0.25
HDLBP-245ENST00000494862 ZBTB43O43298 467 aa13.46□□□□□ -0.25
HDLBP-245ENST00000494862 CYP2D6P10635 497 aa13.46□□□□□ -0.25
HDLBP-245ENST00000494862 DPEP1P16444 411 aa13.46□□□□□ -0.25
HDLBP-245ENST00000494862 KIAA2012Q0VF49 1180 aa13.46□□□□□ -0.25
HDLBP-245ENST00000494862 WTAPQ15007 396 aa13.46□□□□□ -0.25
HDLBP-245ENST00000494862 CCDC93Q567U6 631 aa13.46□□□□□ -0.25
HDLBP-245ENST00000494862 C12orf60Q5U649 245 aa13.46□□□□□ -0.25
HDLBP-245ENST00000494862 STRIP1Q5VSL9 837 aa13.46□□□□□ -0.25
HDLBP-245ENST00000494862 APOA5Q6Q788 366 aa13.46□□□□□ -0.25
HDLBP-245ENST00000494862 SYNE3Q6ZMZ3 975 aa13.46□□□□□ -0.25
HDLBP-245ENST00000494862 AMOTL1Q8IY63 956 aa13.46□□□□□ -0.25
HDLBP-245ENST00000494862 TEX11Q8IYF3 940 aa13.46□□□□□ -0.25
HDLBP-245ENST00000494862 STK11IPQ8N1F8 1099 aa13.46□□□□□ -0.25
HDLBP-245ENST00000494862 DDX11Q96FC9 970 aa13.46□□□□□ -0.25
HDLBP-245ENST00000494862 LMBRD1Q9NUN5 540 aa13.46□□□□□ -0.25
HDLBP-245ENST00000494862 DAGLAQ9Y4D2 1042 aa13.46□□□□□ -0.25
HDLBP-245ENST00000494862 NID2Q14112 1375 aa13.45□□□□□ -0.26
HDLBP-245ENST00000494862 SMIM22K7EJ46 135 aa13.45□□□□□ -0.26
HDLBP-245ENST00000494862 C21orf2O43822 256 aa13.45□□□□□ -0.26
HDLBP-245ENST00000494862 ECE2O60344 883 aa13.45□□□□□ -0.26
HDLBP-245ENST00000494862 USP17L8P0C7I0 530 aa13.45□□□□□ -0.26
HDLBP-245ENST00000494862 KCNA3P22001 575 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms