RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 BTBD19C9JJ37 291 aa14.39□□□□□ -0.11
VTI1A-208ENST00000494728 RHBDL3P58872 404 aa14.39□□□□□ -0.11
VTI1A-208ENST00000494728 ZGPATQ8N5A5 531 aaKnown RBP14.39□□□□□ -0.11
VTI1A-208ENST00000494728 SPATA5Q8NB90 893 aa14.39□□□□□ -0.11
VTI1A-208ENST00000494728 SSH3Q8TE77 659 aa14.39□□□□□ -0.11
VTI1A-208ENST00000494728 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.39□□□□□ -0.11
VTI1A-208ENST00000494728 PHF20L1A8MW92 1017 aa14.38□□□□□ -0.11
VTI1A-208ENST00000494728 SP3Q02447 781 aa14.38□□□□□ -0.11
VTI1A-208ENST00000494728 PICALMQ13492 652 aa14.38□□□□□ -0.11
VTI1A-208ENST00000494728 NOL9Q5SY16 702 aaKnown RBP14.38□□□□□ -0.11
VTI1A-208ENST00000494728 OTUD7BQ6GQQ9 843 aa14.38□□□□□ -0.11
VTI1A-208ENST00000494728 ITPRIPQ8IWB1 547 aa14.38□□□□□ -0.11
VTI1A-208ENST00000494728 NSUN4Q96CB9 384 aaKnown RBP14.38□□□□□ -0.11
VTI1A-208ENST00000494728 HOOK2Q96ED9 719 aa14.38□□□□□ -0.11
VTI1A-208ENST00000494728 ERO1AQ96HE7 468 aa14.38□□□□□ -0.11
VTI1A-208ENST00000494728 DBNDD2Q9BQY9 259 aa14.38□□□□□ -0.11
VTI1A-208ENST00000494728 ARHGAP39Q9C0H5 1083 aa14.38□□□□□ -0.11
VTI1A-208ENST00000494728 TLR7Q9NYK1 1049 aaKnown RBP14.38□□□□□ -0.11
VTI1A-208ENST00000494728 PTPN22Q9Y2R2 807 aa14.38□□□□□ -0.11
VTI1A-208ENST00000494728 ADGRA2Q96PE1 1338 aa14.38□□□□□ -0.11
VTI1A-208ENST00000494728 DDX60LQ5H9U9 1706 aaKnown RBP14.38□□□□□ -0.11
VTI1A-208ENST00000494728 MYH1P12882 1939 aa14.37□□□□□ -0.11
VTI1A-208ENST00000494728 ZBTB7BO15156 539 aaPredicted RBP14.37□□□□□ -0.11
VTI1A-208ENST00000494728 ENTPD3O75355 529 aa14.37□□□□□ -0.11
VTI1A-208ENST00000494728 CETPP11597 493 aa14.37□□□□□ -0.11
VTI1A-208ENST00000494728 PPATQ06203 517 aa14.37□□□□□ -0.11
VTI1A-208ENST00000494728 G3BP1Q13283 466 aaKnown RBP eCLIP14.37□□□□□ -0.11
VTI1A-208ENST00000494728 SNAPC2Q13487 334 aa14.37□□□□□ -0.11
VTI1A-208ENST00000494728 TNNI3KQ59H18 835 aa14.37□□□□□ -0.11
VTI1A-208ENST00000494728 FTSJ3Q8IY81 847 aaKnown RBP14.37□□□□□ -0.11
VTI1A-208ENST00000494728 PANK1Q8TE04 598 aa14.37□□□□□ -0.11
VTI1A-208ENST00000494728 FAM163AQ96GL9 167 aaPredicted RBP14.37□□□□□ -0.11
VTI1A-208ENST00000494728 SNRKQ9NRH2 765 aa14.37□□□□□ -0.11
VTI1A-208ENST00000494728 KCNH4Q9UQ05 1017 aa14.37□□□□□ -0.11
VTI1A-208ENST00000494728 FPGT-TNNI3KV9GXZ4 949 aa14.37□□□□□ -0.11
VTI1A-208ENST00000494728 DOCK3Q8IZD9 2030 aa14.37□□□□□ -0.11
VTI1A-208ENST00000494728 RANBP2P49792 3224 aaKnown RBP14.37□□□□□ -0.11
VTI1A-208ENST00000494728 GPR75-ASB3A0A0A6YYF3 556 aa14.36□□□□□ -0.11
VTI1A-208ENST00000494728 POTEFA5A3E0 1075 aa14.36□□□□□ -0.11
VTI1A-208ENST00000494728 FAM196BA6NMK8 535 aa14.36□□□□□ -0.11
VTI1A-208ENST00000494728 CTGFP29279 349 aa14.36□□□□□ -0.11
VTI1A-208ENST00000494728 ATP8B2P98198 1209 aa14.36□□□□□ -0.11
VTI1A-208ENST00000494728 ERICH6Q7L0X2 663 aa14.36□□□□□ -0.11
VTI1A-208ENST00000494728 CCDC84Q86UT8 332 aaPredicted RBP14.36□□□□□ -0.11
VTI1A-208ENST00000494728 EFCC1Q9HA90 598 aa14.36□□□□□ -0.11
VTI1A-208ENST00000494728 ZFYVE28Q9HCC9 887 aa14.36□□□□□ -0.11
VTI1A-208ENST00000494728 COL2A1P02458 1487 aaPredicted RBP14.36□□□□□ -0.11
VTI1A-208ENST00000494728 ECM2O94769 699 aaPredicted RBP14.35□□□□□ -0.11
VTI1A-208ENST00000494728 GORABQ5T7V8 394 aa14.35□□□□□ -0.11
VTI1A-208ENST00000494728 SPTY2D1Q68D10 685 aaPredicted RBP14.35□□□□□ -0.11
VTI1A-208ENST00000494728 CEP85Q6P2H3 762 aa14.35□□□□□ -0.11
VTI1A-208ENST00000494728 ADGRA1Q86SQ6 560 aa14.35□□□□□ -0.11
VTI1A-208ENST00000494728 DBNLQ9UJU6 430 aaKnown RBP14.35□□□□□ -0.11
VTI1A-208ENST00000494728 NAV1Q8NEY1 1877 aa14.35□□□□□ -0.11
VTI1A-208ENST00000494728 TLR2O60603 784 aa14.34□□□□□ -0.11
VTI1A-208ENST00000494728 SURF6O75683 361 aaKnown RBP14.34□□□□□ -0.11
VTI1A-208ENST00000494728 MAP3K10Q02779 954 aa14.34□□□□□ -0.11
VTI1A-208ENST00000494728 GPAT2Q6NUI2 795 aa14.34□□□□□ -0.11
VTI1A-208ENST00000494728 GPR108Q9NPR9 543 aa14.34□□□□□ -0.11
VTI1A-208ENST00000494728 RAI14Q9P0K7 980 aa14.34□□□□□ -0.11
VTI1A-208ENST00000494728 PTCH2Q9Y6C5 1203 aa14.34□□□□□ -0.11
VTI1A-208ENST00000494728 PDHXO00330 501 aa14.33□□□□□ -0.12
VTI1A-208ENST00000494728 CYP2E1P05181 493 aaPredicted RBP14.33□□□□□ -0.12
VTI1A-208ENST00000494728 LACTBP83111 547 aaPredicted RBP14.33□□□□□ -0.12
VTI1A-208ENST00000494728 OS9Q13438 667 aaPredicted RBP14.33□□□□□ -0.12
VTI1A-208ENST00000494728 RRP1BQ14684 758 aaKnown RBP14.33□□□□□ -0.12
VTI1A-208ENST00000494728 ANKRD23Q86SG2 305 aa14.33□□□□□ -0.12
VTI1A-208ENST00000494728 ZSCAN29Q8IWY8 852 aaPredicted RBP14.33□□□□□ -0.12
VTI1A-208ENST00000494728 SCYL3Q8IZE3 742 aa14.33□□□□□ -0.12
VTI1A-208ENST00000494728 SH3RF3Q8TEJ3 882 aaPredicted RBP14.33□□□□□ -0.12
VTI1A-208ENST00000494728 ARMC5Q96C12 935 aa14.33□□□□□ -0.12
VTI1A-208ENST00000494728 EAF2Q96CJ1 260 aaPredicted RBP14.33□□□□□ -0.12
VTI1A-208ENST00000494728 ZCCHC17Q9NP64 241 aaKnown RBP14.33□□□□□ -0.12
VTI1A-208ENST00000494728 CPA4Q9UI42 421 aa14.33□□□□□ -0.12
VTI1A-208ENST00000494728 NOP58Q9Y2X3 529 aaKnown RBP14.33□□□□□ -0.12
VTI1A-208ENST00000494728 NDUFB9Q9Y6M9 179 aa14.33□□□□□ -0.12
VTI1A-208ENST00000494728 UQCRFS1P1P0C7P4 283 aa14.32□□□□□ -0.12
VTI1A-208ENST00000494728 CYP2C8P10632 490 aa14.32□□□□□ -0.12
VTI1A-208ENST00000494728 PTPRAP18433 802 aa14.32□□□□□ -0.12
VTI1A-208ENST00000494728 TTC39AQ5SRH9 613 aa14.32□□□□□ -0.12
VTI1A-208ENST00000494728 C17orf99Q6UX52 265 aa14.32□□□□□ -0.12
VTI1A-208ENST00000494728 SLF2Q8IX21 1173 aa14.32□□□□□ -0.12
VTI1A-208ENST00000494728 CCDC8Q9H0W5 538 aaPredicted RBP14.32□□□□□ -0.12
VTI1A-208ENST00000494728 OSBPL5Q9H0X9 879 aaPredicted RBP14.32□□□□□ -0.12
VTI1A-208ENST00000494728 PIH1D3Q9NQM4 214 aaKnown RBP14.32□□□□□ -0.12
VTI1A-208ENST00000494728 MYH7P12883 1935 aa14.32□□□□□ -0.12
VTI1A-208ENST00000494728 A0A0G2JLL6 359 aaPredicted RBP14.31□□□□□ -0.12
VTI1A-208ENST00000494728 ZAP70P43403 619 aa14.31□□□□□ -0.12
VTI1A-208ENST00000494728 SHROOM1Q2M3G4 852 aaPredicted RBP14.31□□□□□ -0.12
VTI1A-208ENST00000494728 PRRT2Q7Z6L0 340 aaPredicted RBP14.31□□□□□ -0.12
VTI1A-208ENST00000494728 ZNF333Q96JL9 665 aa14.31□□□□□ -0.12
VTI1A-208ENST00000494728 AATFQ9NY61 560 aaKnown RBP eCLIP14.31□□□□□ -0.12
VTI1A-208ENST00000494728 LRP2BPQ9P2M1 347 aa14.31□□□□□ -0.12
VTI1A-208ENST00000494728 EXOC6BQ9Y2D4 811 aa14.31□□□□□ -0.12
VTI1A-208ENST00000494728 AFG3L2Q9Y4W6 797 aa14.31□□□□□ -0.12
VTI1A-208ENST00000494728 ZHX2Q9Y6X8 837 aa14.31□□□□□ -0.12
VTI1A-208ENST00000494728 PLXNB2O15031 1838 aa14.3□□□□□ -0.12
VTI1A-208ENST00000494728 NPM3O75607 178 aaKnown RBP14.3□□□□□ -0.12
VTI1A-208ENST00000494728 GSTO1P78417 241 aa14.3□□□□□ -0.12
VTI1A-208ENST00000494728 TEX11Q8IYF3 940 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms