RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 OSBP2Q969R2 916 aa13.43□□□□□ -0.26
APTX-230ENST00000494649 PPP4R2Q9NY27 417 aa13.43□□□□□ -0.26
APTX-230ENST00000494649 TRPM7Q96QT4 1865 aa13.43□□□□□ -0.26
APTX-230ENST00000494649 RNF113AO15541 343 aaKnown RBP13.43□□□□□ -0.26
APTX-230ENST00000494649 GSPT1P15170 499 aaKnown RBP13.43□□□□□ -0.26
APTX-230ENST00000494649 FAM151AQ8WW52 585 aa13.43□□□□□ -0.26
APTX-230ENST00000494649 CSRNP1Q96S65 589 aa13.43□□□□□ -0.26
APTX-230ENST00000494649 IDI2Q9BXS1 227 aa13.43□□□□□ -0.26
APTX-230ENST00000494649 PALD1Q9ULE6 856 aa13.43□□□□□ -0.26
APTX-230ENST00000494649 RFX7Q2KHR2 1363 aa13.42□□□□□ -0.26
APTX-230ENST00000494649 FLT1P17948 1338 aa13.42□□□□□ -0.26
APTX-230ENST00000494649 M0R2C6 588 aa13.42□□□□□ -0.26
APTX-230ENST00000494649 PPP4CP60510 307 aa13.42□□□□□ -0.26
APTX-230ENST00000494649 EVX2Q03828 476 aa13.42□□□□□ -0.26
APTX-230ENST00000494649 MKRN3Q13064 507 aaKnown RBP13.42□□□□□ -0.26
APTX-230ENST00000494649 CYP4F22Q6NT55 531 aa13.42□□□□□ -0.26
APTX-230ENST00000494649 CCDC129Q6ZRS4 1044 aa13.42□□□□□ -0.26
APTX-230ENST00000494649 FAM83AQ86UY5 434 aa13.42□□□□□ -0.26
APTX-230ENST00000494649 AIDAQ96BJ3 306 aa13.42□□□□□ -0.26
APTX-230ENST00000494649 EVI5LQ96CN4 794 aa13.42□□□□□ -0.26
APTX-230ENST00000494649 OSBPL3Q9H4L5 887 aa13.42□□□□□ -0.26
APTX-230ENST00000494649 PPP2R3BQ9Y5P8 575 aa13.42□□□□□ -0.26
APTX-230ENST00000494649 UBE3CQ15386 1083 aa13.41□□□□□ -0.26
APTX-230ENST00000494649 SUPT20HL1Q3ZLR7 823 aa13.41□□□□□ -0.26
APTX-230ENST00000494649 ZSCAN25Q6NSZ9 544 aa13.41□□□□□ -0.26
APTX-230ENST00000494649 OSBPL5Q9H0X9 879 aaPredicted RBP13.41□□□□□ -0.26
APTX-230ENST00000494649 TLL2Q9Y6L7 1015 aa13.41□□□□□ -0.26
APTX-230ENST00000494649 PLCG2P16885 1265 aa13.41□□□□□ -0.26
APTX-230ENST00000494649 TTC22Q5TAA0 569 aa13.41□□□□□ -0.26
APTX-230ENST00000494649 FKBP1CQ5VVH2 108 aa13.41□□□□□ -0.26
APTX-230ENST00000494649 FAM227BQ96M60 508 aa13.41□□□□□ -0.26
APTX-230ENST00000494649 MYH7P12883 1935 aa13.41□□□□□ -0.26
APTX-230ENST00000494649 APPBP2Q92624 585 aa13.4□□□□□ -0.26
APTX-230ENST00000494649 CLMNQ96JQ2 1002 aa13.4□□□□□ -0.26
APTX-230ENST00000494649 SMIM22K7EJ46 135 aa13.4□□□□□ -0.27
APTX-230ENST00000494649 PPP1R12BO60237 982 aaPredicted RBP13.4□□□□□ -0.27
APTX-230ENST00000494649 ENTPD3O75355 529 aa13.4□□□□□ -0.27
APTX-230ENST00000494649 USP2O75604 605 aaPredicted RBP13.4□□□□□ -0.27
APTX-230ENST00000494649 SDSP20132 328 aa13.4□□□□□ -0.27
APTX-230ENST00000494649 DEFB115Q30KQ5 88 aa13.4□□□□□ -0.27
APTX-230ENST00000494649 CRNKL1Q9BZJ0 848 aaKnown RBP13.4□□□□□ -0.27
APTX-230ENST00000494649 SLC4A4Q9Y6R1 1079 aa13.4□□□□□ -0.27
APTX-230ENST00000494649 A0A0D9SFI3 127 aa13.39□□□□□ -0.27
APTX-230ENST00000494649 GPAA1O43292 621 aa13.39□□□□□ -0.27
APTX-230ENST00000494649 ZNF157P51786 506 aaPredicted RBP13.39□□□□□ -0.27
APTX-230ENST00000494649 ARMC9Q7Z3E5 817 aa13.39□□□□□ -0.27
APTX-230ENST00000494649 STK11IPQ8N1F8 1099 aa13.39□□□□□ -0.27
APTX-230ENST00000494649 ZKSCAN4Q969J2 545 aaPredicted RBP13.39□□□□□ -0.27
APTX-230ENST00000494649 WRNIP1Q96S55 665 aa13.39□□□□□ -0.27
APTX-230ENST00000494649 CDK5RAP2Q96SN8 1893 aa13.39□□□□□ -0.27
APTX-230ENST00000494649 CYP2D7A0A087X1C5 515 aa13.38□□□□□ -0.27
APTX-230ENST00000494649 CYP2D6P10635 497 aa13.38□□□□□ -0.27
APTX-230ENST00000494649 VEGFBP49765 207 aa13.38□□□□□ -0.27
APTX-230ENST00000494649 NMIQ13287 307 aaPredicted RBP13.38□□□□□ -0.27
APTX-230ENST00000494649 MCM9Q9NXL9 1143 aa13.38□□□□□ -0.27
APTX-230ENST00000494649 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.38□□□□□ -0.27
APTX-230ENST00000494649 AOC2O75106 756 aa13.38□□□□□ -0.27
APTX-230ENST00000494649 APPP05067 770 aa13.38□□□□□ -0.27
APTX-230ENST00000494649 ZFYP08048 801 aaPredicted RBP13.38□□□□□ -0.27
APTX-230ENST00000494649 INPP5BP32019 993 aa13.38□□□□□ -0.27
APTX-230ENST00000494649 CWC27Q6UX04 472 aaKnown RBP13.38□□□□□ -0.27
APTX-230ENST00000494649 CNKSR2Q8WXI2 1034 aa13.38□□□□□ -0.27
APTX-230ENST00000494649 STRBPQ96SI9 672 aaKnown RBP13.38□□□□□ -0.27
APTX-230ENST00000494649 ZIC5Q96T25 663 aa13.38□□□□□ -0.27
APTX-230ENST00000494649 DCP1AQ9NPI6 582 aaPredicted RBP13.38□□□□□ -0.27
APTX-230ENST00000494649 PAPPA2Q9BXP8 1791 aa13.37□□□□□ -0.27
APTX-230ENST00000494649 PLCD1P51178 756 aa13.37□□□□□ -0.27
APTX-230ENST00000494649 ZMYM1Q5SVZ6 1142 aa13.37□□□□□ -0.27
APTX-230ENST00000494649 CAPNS2Q96L46 248 aa13.37□□□□□ -0.27
APTX-230ENST00000494649 ELP3Q9H9T3 547 aa13.37□□□□□ -0.27
APTX-230ENST00000494649 RASSF10A6NK89 507 aa13.36□□□□□ -0.27
APTX-230ENST00000494649 POLR3DP05423 398 aaPredicted RBP13.36□□□□□ -0.27
APTX-230ENST00000494649 IREB2P48200 963 aaKnown RBP13.36□□□□□ -0.27
APTX-230ENST00000494649 VGLL4Q14135 290 aa13.36□□□□□ -0.27
APTX-230ENST00000494649 LRRFIP1Q32MZ4 808 aaKnown RBP13.36□□□□□ -0.27
APTX-230ENST00000494649 VPS53Q5VIR6 699 aa13.36□□□□□ -0.27
APTX-230ENST00000494649 ERICH6BQ5W0A0 696 aa13.36□□□□□ -0.27
APTX-230ENST00000494649 RGMBQ6NW40 437 aa13.36□□□□□ -0.27
APTX-230ENST00000494649 ZNF589Q86UQ0 364 aaPredicted RBP13.36□□□□□ -0.27
APTX-230ENST00000494649 DNAJC5GQ8N7S2 189 aa13.36□□□□□ -0.27
APTX-230ENST00000494649 KLRG1Q96E93 195 aa13.36□□□□□ -0.27
APTX-230ENST00000494649 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.36□□□□□ -0.27
APTX-230ENST00000494649 ATRNL1Q5VV63 1379 aa13.36□□□□□ -0.27
APTX-230ENST00000494649 RPAP1Q9BWH6 1393 aaPredicted RBP13.36□□□□□ -0.27
APTX-230ENST00000494649 IGSF3O75054 1194 aa13.36□□□□□ -0.27
APTX-230ENST00000494649 SHROOM1Q2M3G4 852 aaPredicted RBP13.36□□□□□ -0.27
APTX-230ENST00000494649 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.36□□□□□ -0.27
APTX-230ENST00000494649 CCDC84Q86UT8 332 aaPredicted RBP13.36□□□□□ -0.27
APTX-230ENST00000494649 CRACR2BQ8N4Y2 399 aaPredicted RBP13.36□□□□□ -0.27
APTX-230ENST00000494649 IL25Q9H293 177 aa13.36□□□□□ -0.27
APTX-230ENST00000494649 DIAPH3Q9NSV4 1193 aa13.36□□□□□ -0.27
APTX-230ENST00000494649 FKBP1BP68106 108 aa13.35□□□□□ -0.27
APTX-230ENST00000494649 DCAF15Q66K64 600 aa13.35□□□□□ -0.27
APTX-230ENST00000494649 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.35□□□□□ -0.27
APTX-230ENST00000494649 ZNF341Q9BYN7 854 aa13.35□□□□□ -0.27
APTX-230ENST00000494649 DNAJC18Q9H819 358 aa13.35□□□□□ -0.27
APTX-230ENST00000494649 EPB41L4AQ9HCS5 686 aaPredicted RBP13.35□□□□□ -0.27
APTX-230ENST00000494649 WDR33Q9C0J8 1336 aaKnown RBP13.35□□□□□ -0.27
APTX-230ENST00000494649 FOCADQ5VW36 1801 aa13.35□□□□□ -0.27
APTX-230ENST00000494649 BAZ2AQ9UIF9 1905 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms