RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 SLFNL1Q499Z3 407 aa28.43■■■□□ 2.14
CLIC3-203ENST00000494426 MIGA1Q8NAN2 632 aa28.43■■■□□ 2.14
CLIC3-203ENST00000494426 STAP2Q9UGK3 403 aa28.43■■■□□ 2.14
CLIC3-203ENST00000494426 ZNF532Q9HCE3 1301 aa28.43■■■□□ 2.14
CLIC3-203ENST00000494426 DDTLA6NHG4 134 aaPredicted RBP28.42■■■□□ 2.14
CLIC3-203ENST00000494426 CHGBP05060 677 aa28.42■■■□□ 2.14
CLIC3-203ENST00000494426 SLC10A3P09131 477 aa28.42■■■□□ 2.14
CLIC3-203ENST00000494426 PLCG2P16885 1265 aa28.42■■■□□ 2.14
CLIC3-203ENST00000494426 CHD1LQ86WJ1 897 aa28.42■■■□□ 2.14
CLIC3-203ENST00000494426 RASAL3Q86YV0 1011 aa28.42■■■□□ 2.14
CLIC3-203ENST00000494426 CCDC102AQ96A19 550 aa28.42■■■□□ 2.14
CLIC3-203ENST00000494426 ZIC5Q96T25 663 aa28.42■■■□□ 2.14
CLIC3-203ENST00000494426 ADD2P35612 726 aa28.41■■■□□ 2.14
CLIC3-203ENST00000494426 IREB2P48200 963 aaKnown RBP28.41■■■□□ 2.14
CLIC3-203ENST00000494426 MIGA2Q7L4E1 593 aa28.41■■■□□ 2.14
CLIC3-203ENST00000494426 CLMNQ96JQ2 1002 aa28.41■■■□□ 2.14
CLIC3-203ENST00000494426 RIOK1Q9BRS2 568 aaKnown RBP28.41■■■□□ 2.14
CLIC3-203ENST00000494426 ERC2O15083 957 aa28.4■■■□□ 2.14
CLIC3-203ENST00000494426 GLRX3O76003 335 aaKnown RBP28.4■■■□□ 2.14
CLIC3-203ENST00000494426 PDE1AP54750 535 aa28.4■■■□□ 2.14
CLIC3-203ENST00000494426 ATRNL1Q5VV63 1379 aa28.39■■■□□ 2.14
CLIC3-203ENST00000494426 MAP2K2P36507 400 aa28.39■■■□□ 2.14
CLIC3-203ENST00000494426 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.39■■■□□ 2.14
CLIC3-203ENST00000494426 TGFBRAP1Q8WUH2 860 aa28.39■■■□□ 2.14
CLIC3-203ENST00000494426 HOOK2Q96ED9 719 aa28.39■■■□□ 2.14
CLIC3-203ENST00000494426 OSBPL5Q9H0X9 879 aaPredicted RBP28.39■■■□□ 2.14
CLIC3-203ENST00000494426 UNCXA6NJT0 531 aa28.38■■■□□ 2.13
CLIC3-203ENST00000494426 SLURP2P0DP57 97 aa28.38■■■□□ 2.13
CLIC3-203ENST00000494426 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.38■■■□□ 2.13
CLIC3-203ENST00000494426 ZSCAN29Q8IWY8 852 aaPredicted RBP28.38■■■□□ 2.13
CLIC3-203ENST00000494426 KBTBD3Q8NAB2 608 aa28.38■■■□□ 2.13
CLIC3-203ENST00000494426 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.38■■■□□ 2.13
CLIC3-203ENST00000494426 NOGQ13253 232 aa28.37■■■□□ 2.13
CLIC3-203ENST00000494426 MAPKAPK5Q8IW41 473 aa28.37■■■□□ 2.13
CLIC3-203ENST00000494426 ANKRD13AQ8IZ07 590 aa28.37■■■□□ 2.13
CLIC3-203ENST00000494426 CSRNP1Q96S65 589 aa28.37■■■□□ 2.13
CLIC3-203ENST00000494426 COL2A1P02458 1487 aaPredicted RBP28.37■■■□□ 2.13
CLIC3-203ENST00000494426 MAGEB6P1A0A0J9YX57 407 aa28.36■■■□□ 2.13
CLIC3-203ENST00000494426 MAP3K9P80192 1104 aa28.36■■■□□ 2.13
CLIC3-203ENST00000494426 MAP3K10Q02779 954 aa28.36■■■□□ 2.13
CLIC3-203ENST00000494426 UBE3CQ15386 1083 aa28.36■■■□□ 2.13
CLIC3-203ENST00000494426 DCAF15Q66K64 600 aa28.36■■■□□ 2.13
CLIC3-203ENST00000494426 ZNF341Q9BYN7 854 aa28.36■■■□□ 2.13
CLIC3-203ENST00000494426 FLT1P17948 1338 aa28.36■■■□□ 2.13
CLIC3-203ENST00000494426 CERS3Q8IU89 383 aa28.35■■■□□ 2.13
CLIC3-203ENST00000494426 SLC10A4Q96EP9 437 aa28.35■■■□□ 2.13
CLIC3-203ENST00000494426 ZNF112Q9UJU3 913 aa28.35■■■□□ 2.13
CLIC3-203ENST00000494426 KIF23Q02241 960 aaPredicted RBP28.34■■■□□ 2.13
CLIC3-203ENST00000494426 ZSCAN25Q6NSZ9 544 aa28.34■■■□□ 2.13
CLIC3-203ENST00000494426 PLEKHM2Q8IWE5 1019 aa28.34■■■□□ 2.13
CLIC3-203ENST00000494426 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.34■■■□□ 2.13
CLIC3-203ENST00000494426 SIPA1L1O43166 1804 aa28.34■■■□□ 2.13
CLIC3-203ENST00000494426 VGLL4Q14135 290 aa28.33■■■□□ 2.13
CLIC3-203ENST00000494426 LCORLQ8N3X6 602 aa28.33■■■□□ 2.13
CLIC3-203ENST00000494426 WRNIP1Q96S55 665 aa28.33■■■□□ 2.13
CLIC3-203ENST00000494426 WBP1LQ9NX94 342 aa28.33■■■□□ 2.13
CLIC3-203ENST00000494426 PCNTO95613 3336 aa28.33■■■□□ 2.13
CLIC3-203ENST00000494426 MYH1P12882 1939 aa28.32■■■□□ 2.12
CLIC3-203ENST00000494426 SPRYD7Q5W111 196 aa28.32■■■□□ 2.12
CLIC3-203ENST00000494426 ZKSCAN4Q969J2 545 aaPredicted RBP28.32■■■□□ 2.12
CLIC3-203ENST00000494426 ELP3Q9H9T3 547 aa28.32■■■□□ 2.12
CLIC3-203ENST00000494426 PHF20L1A8MW92 1017 aa28.31■■■□□ 2.12
CLIC3-203ENST00000494426 HSPA1AP0DMV8 641 aaKnown RBP28.31■■■□□ 2.12
CLIC3-203ENST00000494426 HSPA1BP0DMV9 641 aaKnown RBP28.31■■■□□ 2.12
CLIC3-203ENST00000494426 INPP5BP32019 993 aa28.31■■■□□ 2.12
CLIC3-203ENST00000494426 GJA5P36382 358 aa28.31■■■□□ 2.12
CLIC3-203ENST00000494426 MKRN3Q13064 507 aaKnown RBP28.31■■■□□ 2.12
CLIC3-203ENST00000494426 WNK4Q96J92 1243 aa28.31■■■□□ 2.12
CLIC3-203ENST00000494426 PUS7LQ9H0K6 701 aaKnown RBP28.31■■■□□ 2.12
CLIC3-203ENST00000494426 OSBPL3Q9H4L5 887 aa28.31■■■□□ 2.12
CLIC3-203ENST00000494426 ARMT1Q9H993 441 aa28.31■■■□□ 2.12
CLIC3-203ENST00000494426 SNCAIPQ9Y6H5 919 aa28.31■■■□□ 2.12
CLIC3-203ENST00000494426 RNF113AO15541 343 aaKnown RBP28.3■■■□□ 2.12
CLIC3-203ENST00000494426 TBC1D12O60347 775 aa28.3■■■□□ 2.12
CLIC3-203ENST00000494426 PDE4AP27815 886 aa28.3■■■□□ 2.12
CLIC3-203ENST00000494426 USP5P45974 858 aa28.3■■■□□ 2.12
CLIC3-203ENST00000494426 MAP2K1Q02750 393 aaPredicted RBP28.3■■■□□ 2.12
CLIC3-203ENST00000494426 SAP30BPQ9UHR5 308 aaKnown RBP28.3■■■□□ 2.12
CLIC3-203ENST00000494426 PALD1Q9ULE6 856 aa28.3■■■□□ 2.12
CLIC3-203ENST00000494426 MBD4O95243 580 aa28.29■■■□□ 2.12
CLIC3-203ENST00000494426 CNKSR2Q8WXI2 1034 aa28.29■■■□□ 2.12
CLIC3-203ENST00000494426 DHX36Q9H2U1 1008 aaKnown RBP28.29■■■□□ 2.12
CLIC3-203ENST00000494426 CSADQ9Y600 493 aa28.29■■■□□ 2.12
CLIC3-203ENST00000494426 LAMB1P07942 1786 aa28.29■■■□□ 2.12
CLIC3-203ENST00000494426 FAM196BA6NMK8 535 aa28.28■■■□□ 2.12
CLIC3-203ENST00000494426 CRNKL1Q9BZJ0 848 aaKnown RBP28.28■■■□□ 2.12
CLIC3-203ENST00000494426 PI4KBQ9UBF8 816 aa28.28■■■□□ 2.12
CLIC3-203ENST00000494426 DDX60LQ5H9U9 1706 aaKnown RBP28.28■■■□□ 2.12
CLIC3-203ENST00000494426 PRKAB2O43741 272 aa28.27■■■□□ 2.12
CLIC3-203ENST00000494426 CENPBP07199 599 aaPredicted RBP28.27■■■□□ 2.12
CLIC3-203ENST00000494426 ZFYP08048 801 aaPredicted RBP28.27■■■□□ 2.12
CLIC3-203ENST00000494426 SDR42E1Q8WUS8 393 aa28.27■■■□□ 2.12
CLIC3-203ENST00000494426 OSBP2Q969R2 916 aa28.27■■■□□ 2.12
CLIC3-203ENST00000494426 OPTNQ96CV9 577 aa28.27■■■□□ 2.12
CLIC3-203ENST00000494426 FSD1Q9BTV5 496 aa28.27■■■□□ 2.12
CLIC3-203ENST00000494426 NAV1Q8NEY1 1877 aa28.27■■■□□ 2.12
CLIC3-203ENST00000494426 ZBTB48P10074 688 aaPredicted RBP28.26■■■□□ 2.11
CLIC3-203ENST00000494426 APPBP2Q92624 585 aa28.26■■■□□ 2.11
CLIC3-203ENST00000494426 EVI5LQ96CN4 794 aa28.26■■■□□ 2.11
CLIC3-203ENST00000494426 NOL9Q5SY16 702 aaKnown RBP28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms