RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 PUS7LQ9H0K6 701 aaKnown RBP8.39□□□□□ -1.07
SNX13-210ENST00000494402 RSPH9Q9H1X1 276 aaPredicted RBP8.39□□□□□ -1.07
SNX13-210ENST00000494402 ELP3Q9H9T3 547 aa8.39□□□□□ -1.07
SNX13-210ENST00000494402 NCOA5Q9HCD5 579 aaKnown RBP8.39□□□□□ -1.07
SNX13-210ENST00000494402 INTS7Q9NVH2 962 aaKnown RBP8.39□□□□□ -1.07
SNX13-210ENST00000494402 AKAP2Q9Y2D5 859 aa8.39□□□□□ -1.07
SNX13-210ENST00000494402 DYTNA2CJ06 578 aa8.38□□□□□ -1.07
SNX13-210ENST00000494402 TLR3O15455 904 aaKnown RBP8.38□□□□□ -1.07
SNX13-210ENST00000494402 GPR39O43194 453 aa8.38□□□□□ -1.07
SNX13-210ENST00000494402 TLL1O43897 1013 aa8.38□□□□□ -1.07
SNX13-210ENST00000494402 FBXO24O75426 580 aa8.38□□□□□ -1.07
SNX13-210ENST00000494402 ARAFP10398 606 aa8.38□□□□□ -1.07
SNX13-210ENST00000494402 SARSP49591 514 aaKnown RBP8.38□□□□□ -1.07
SNX13-210ENST00000494402 HIF1AQ16665 826 aa8.38□□□□□ -1.07
SNX13-210ENST00000494402 HGSNATQ68CP4 663 aa8.38□□□□□ -1.07
SNX13-210ENST00000494402 VASH1Q7L8A9 365 aaPredicted RBP8.38□□□□□ -1.07
SNX13-210ENST00000494402 REXO1Q8N1G1 1221 aaKnown RBP8.38□□□□□ -1.07
SNX13-210ENST00000494402 PPHLN1Q8NEY8 458 aaKnown RBP8.38□□□□□ -1.07
SNX13-210ENST00000494402 XAGE2Q96GT9 111 aa8.38□□□□□ -1.07
SNX13-210ENST00000494402 RHOBTB2Q9BYZ6 727 aa8.38□□□□□ -1.07
SNX13-210ENST00000494402 CEP44Q9C0F1 390 aa8.38□□□□□ -1.07
SNX13-210ENST00000494402 CCDC8Q9H0W5 538 aaPredicted RBP8.38□□□□□ -1.07
SNX13-210ENST00000494402 LUC7LQ9NQ29 371 aaKnown RBP8.38□□□□□ -1.07
SNX13-210ENST00000494402 CABP1Q9NZU7 370 aa8.38□□□□□ -1.07
SNX13-210ENST00000494402 IQCA1LA6NCM1 817 aa8.37□□□□□ -1.07
SNX13-210ENST00000494402 ADCY3O60266 1144 aa8.37□□□□□ -1.07
SNX13-210ENST00000494402 SRGNP10124 158 aa8.37□□□□□ -1.07
SNX13-210ENST00000494402 STRN3Q13033 797 aa8.37□□□□□ -1.07
SNX13-210ENST00000494402 TCIRG1Q13488 830 aa8.37□□□□□ -1.07
SNX13-210ENST00000494402 AGMOQ6ZNB7 445 aa8.37□□□□□ -1.07
SNX13-210ENST00000494402 SPATS2Q86XZ4 545 aaKnown RBP8.37□□□□□ -1.07
SNX13-210ENST00000494402 IFNL2Q8IZJ0 200 aa8.37□□□□□ -1.07
SNX13-210ENST00000494402 AHI1Q8N157 1196 aa8.37□□□□□ -1.07
SNX13-210ENST00000494402 PI4K2BQ8TCG2 481 aa8.37□□□□□ -1.07
SNX13-210ENST00000494402 LEO1Q8WVC0 666 aaPredicted RBP8.37□□□□□ -1.07
SNX13-210ENST00000494402 ZNF516Q92618 1163 aa8.37□□□□□ -1.07
SNX13-210ENST00000494402 TIFAQ96CG3 184 aa8.37□□□□□ -1.07
SNX13-210ENST00000494402 GPR101Q96P66 508 aaPredicted RBP8.37□□□□□ -1.07
SNX13-210ENST00000494402 PLCB1Q9NQ66 1216 aa8.37□□□□□ -1.07
SNX13-210ENST00000494402 RAB6BQ9NRW1 208 aa8.37□□□□□ -1.07
SNX13-210ENST00000494402 ANKIB1Q9P2G1 1089 aa8.37□□□□□ -1.07
SNX13-210ENST00000494402 POLG2Q9UHN1 485 aa8.37□□□□□ -1.07
SNX13-210ENST00000494402 RABGAP1Q9Y3P9 1069 aa8.37□□□□□ -1.07
SNX13-210ENST00000494402 RPGRIP1LQ68CZ1 1315 aa8.36□□□□□ -1.07
SNX13-210ENST00000494402 KLRG2A4D1S0 409 aaPredicted RBP8.36□□□□□ -1.07
SNX13-210ENST00000494402 UBAP1LF5GYI3 381 aa8.36□□□□□ -1.07
SNX13-210ENST00000494402 TGFBR3LH3BV60 316 aa8.36□□□□□ -1.07
SNX13-210ENST00000494402 BRINP1O60477 761 aa8.36□□□□□ -1.07
SNX13-210ENST00000494402 CT47B1P0C2W7 299 aaPredicted RBP8.36□□□□□ -1.07
SNX13-210ENST00000494402 EPB42P16452 691 aa8.36□□□□□ -1.07
SNX13-210ENST00000494402 TFE3P19532 575 aaPredicted RBP8.36□□□□□ -1.07
SNX13-210ENST00000494402 DHX9Q08211 1270 aaKnown RBP8.36□□□□□ -1.07
SNX13-210ENST00000494402 MPP2Q14168 576 aa8.36□□□□□ -1.07
SNX13-210ENST00000494402 MINDY4Q4G0A6 757 aa8.36□□□□□ -1.07
SNX13-210ENST00000494402 HYIQ5T013 277 aa8.36□□□□□ -1.07
SNX13-210ENST00000494402 MRM1Q6IN84 353 aaKnown RBP8.36□□□□□ -1.07
SNX13-210ENST00000494402 DTHD1Q6ZMT9 781 aa8.36□□□□□ -1.07
SNX13-210ENST00000494402 MMS22LQ6ZRQ5 1243 aa8.36□□□□□ -1.07
SNX13-210ENST00000494402 TOGARAM2Q6ZUX3 1019 aa8.36□□□□□ -1.07
SNX13-210ENST00000494402 CCDC84Q86UT8 332 aaPredicted RBP8.36□□□□□ -1.07
SNX13-210ENST00000494402 TRIM42Q8IWZ5 723 aa8.36□□□□□ -1.07
SNX13-210ENST00000494402 VPS37AQ8NEZ2 397 aa8.36□□□□□ -1.07
SNX13-210ENST00000494402 PMEPA1Q969W9 287 aa8.36□□□□□ -1.07
SNX13-210ENST00000494402 TRMT2BQ96GJ1 504 aaKnown RBP8.36□□□□□ -1.07
SNX13-210ENST00000494402 TMEM63CQ9P1W3 806 aa8.36□□□□□ -1.07
SNX13-210ENST00000494402 TRHDEQ9UKU6 1024 aa8.36□□□□□ -1.07
SNX13-210ENST00000494402 ASAP1Q9ULH1 1129 aa8.36□□□□□ -1.07
SNX13-210ENST00000494402 NOL7Q9UMY1 257 aaKnown RBP8.36□□□□□ -1.07
SNX13-210ENST00000494402 BCS1LQ9Y276 419 aa8.36□□□□□ -1.07
SNX13-210ENST00000494402 EREGO14944 169 aa8.35□□□□□ -1.07
SNX13-210ENST00000494402 F13A1P00488 732 aa8.35□□□□□ -1.07
SNX13-210ENST00000494402 CCNFP41002 786 aa8.35□□□□□ -1.07
SNX13-210ENST00000494402 RPS26P62854 115 aaKnown RBP8.35□□□□□ -1.07
SNX13-210ENST00000494402 MAP7Q14244 749 aa8.35□□□□□ -1.07
SNX13-210ENST00000494402 STAT4Q14765 748 aa8.35□□□□□ -1.07
SNX13-210ENST00000494402 KRT72Q14CN4 511 aa8.35□□□□□ -1.07
SNX13-210ENST00000494402 PUM3Q15397 648 aaKnown RBP8.35□□□□□ -1.07
SNX13-210ENST00000494402 DIEXFQ68CQ4 756 aaKnown RBP8.35□□□□□ -1.07
SNX13-210ENST00000494402 TTBK2Q6IQ55 1244 aa8.35□□□□□ -1.07
SNX13-210ENST00000494402 NBPF10Q6P3W6 841 aaKnown RBP8.35□□□□□ -1.07
SNX13-210ENST00000494402 TPTE2Q6XPS3 522 aa8.35□□□□□ -1.07
SNX13-210ENST00000494402 GK5Q6ZS86 529 aa8.35□□□□□ -1.07
SNX13-210ENST00000494402 NLRP8Q86W28 1048 aa8.35□□□□□ -1.07
SNX13-210ENST00000494402 FBXO27Q8NI29 283 aa8.35□□□□□ -1.07
SNX13-210ENST00000494402 SKA1Q96BD8 255 aa8.35□□□□□ -1.07
SNX13-210ENST00000494402 PLD4Q96BZ4 506 aa8.35□□□□□ -1.07
SNX13-210ENST00000494402 MPP4Q96JB8 637 aa8.35□□□□□ -1.07
SNX13-210ENST00000494402 SLC6A16Q9GZN6 736 aa8.35□□□□□ -1.07
SNX13-210ENST00000494402 ZFYVE1Q9HBF4 777 aa8.35□□□□□ -1.07
SNX13-210ENST00000494402 IFT122Q9HBG6 1241 aa8.35□□□□□ -1.07
SNX13-210ENST00000494402 TMPRSS4Q9NRS4 437 aa8.35□□□□□ -1.07
SNX13-210ENST00000494402 CELA3AP09093 270 aa8.34□□□□□ -1.07
SNX13-210ENST00000494402 SERPINB3P29508 390 aa8.34□□□□□ -1.07
SNX13-210ENST00000494402 DDIT3P35638 169 aa8.34□□□□□ -1.07
SNX13-210ENST00000494402 ZNF280AP59817 542 aaPredicted RBP8.34□□□□□ -1.07
SNX13-210ENST00000494402 BIRC3Q13489 604 aa8.34□□□□□ -1.07
SNX13-210ENST00000494402 DHCR24Q15392 516 aa8.34□□□□□ -1.07
SNX13-210ENST00000494402 SAFBQ15424 915 aaKnown RBP eCLIP8.34□□□□□ -1.07
SNX13-210ENST00000494402 COBLL1Q53SF7 1204 aa8.34□□□□□ -1.07
SNX13-210ENST00000494402 CCDC93Q567U6 631 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms