RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 BTDP43251 543 aa16.5■□□□□ 0.23
CTDSP1-212ENST00000494067 PPATQ06203 517 aa16.5■□□□□ 0.23
CTDSP1-212ENST00000494067 TNNI3KQ59H18 835 aa16.5■□□□□ 0.23
CTDSP1-212ENST00000494067 ERICH6Q7L0X2 663 aa16.5■□□□□ 0.23
CTDSP1-212ENST00000494067 ZSCAN29Q8IWY8 852 aaPredicted RBP16.5■□□□□ 0.23
CTDSP1-212ENST00000494067 CD99L2Q8TCZ2 262 aa16.5■□□□□ 0.23
CTDSP1-212ENST00000494067 FAM163AQ96GL9 167 aaPredicted RBP16.5■□□□□ 0.23
CTDSP1-212ENST00000494067 IDI2Q9BXS1 227 aa16.5■□□□□ 0.23
CTDSP1-212ENST00000494067 FPGT-TNNI3KV9GXZ4 949 aa16.5■□□□□ 0.23
CTDSP1-212ENST00000494067 PTPRFP10586 1907 aa16.5■□□□□ 0.23
CTDSP1-212ENST00000494067 FOCADQ5VW36 1801 aa16.49■□□□□ 0.23
CTDSP1-212ENST00000494067 CENPFP49454 3210 aa16.49■□□□□ 0.23
CTDSP1-212ENST00000494067 ENTPD3O75355 529 aa16.49■□□□□ 0.23
CTDSP1-212ENST00000494067 LDHCP07864 332 aa16.49■□□□□ 0.23
CTDSP1-212ENST00000494067 GSTO1P78417 241 aa16.49■□□□□ 0.23
CTDSP1-212ENST00000494067 PPIL2Q13356 520 aa16.49■□□□□ 0.23
CTDSP1-212ENST00000494067 OS9Q13438 667 aaPredicted RBP16.49■□□□□ 0.23
CTDSP1-212ENST00000494067 MOGSQ13724 837 aa16.49■□□□□ 0.23
CTDSP1-212ENST00000494067 CEP85Q6P2H3 762 aa16.49■□□□□ 0.23
CTDSP1-212ENST00000494067 OTOP1Q7RTM1 612 aa16.49■□□□□ 0.23
CTDSP1-212ENST00000494067 NSUN4Q96CB9 384 aaKnown RBP16.49■□□□□ 0.23
CTDSP1-212ENST00000494067 EFCC1Q9HA90 598 aa16.49■□□□□ 0.23
CTDSP1-212ENST00000494067 ZCCHC17Q9NP64 241 aaKnown RBP16.49■□□□□ 0.23
CTDSP1-212ENST00000494067 SNRKQ9NRH2 765 aa16.49■□□□□ 0.23
CTDSP1-212ENST00000494067 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.49■□□□□ 0.23
CTDSP1-212ENST00000494067 ATAD5Q96QE3 1844 aa16.48■□□□□ 0.23
CTDSP1-212ENST00000494067 BRCA2P51587 3418 aa16.48■□□□□ 0.23
CTDSP1-212ENST00000494067 GPR75-ASB3A0A0A6YYF3 556 aa16.48■□□□□ 0.23
CTDSP1-212ENST00000494067 PHF20L1A8MW92 1017 aa16.48■□□□□ 0.23
CTDSP1-212ENST00000494067 BTBD19C9JJ37 291 aa16.48■□□□□ 0.23
CTDSP1-212ENST00000494067 SURF6O75683 361 aaKnown RBP16.48■□□□□ 0.23
CTDSP1-212ENST00000494067 UQCRFS1P1P0C7P4 283 aa16.48■□□□□ 0.23
CTDSP1-212ENST00000494067 KIF22Q14807 665 aa16.48■□□□□ 0.23
CTDSP1-212ENST00000494067 NOP58Q9Y2X3 529 aaKnown RBP16.48■□□□□ 0.23
CTDSP1-212ENST00000494067 PICALMQ13492 652 aa16.47■□□□□ 0.23
CTDSP1-212ENST00000494067 ADGRA1Q86SQ6 560 aa16.47■□□□□ 0.23
CTDSP1-212ENST00000494067 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.47■□□□□ 0.23
CTDSP1-212ENST00000494067 GPR108Q9NPR9 543 aa16.47■□□□□ 0.23
CTDSP1-212ENST00000494067 DBNLQ9UJU6 430 aaKnown RBP16.47■□□□□ 0.23
CTDSP1-212ENST00000494067 CYP2E1P05181 493 aaPredicted RBP16.46■□□□□ 0.23
CTDSP1-212ENST00000494067 MAP3K10Q02779 954 aa16.46■□□□□ 0.23
CTDSP1-212ENST00000494067 CCDC158Q5M9N0 1113 aa16.46■□□□□ 0.23
CTDSP1-212ENST00000494067 NOL9Q5SY16 702 aaKnown RBP16.46■□□□□ 0.23
CTDSP1-212ENST00000494067 EAF2Q96CJ1 260 aaPredicted RBP16.46■□□□□ 0.23
CTDSP1-212ENST00000494067 NOL10Q9BSC4 688 aaKnown RBP16.46■□□□□ 0.23
CTDSP1-212ENST00000494067 CCDC8Q9H0W5 538 aaPredicted RBP16.46■□□□□ 0.23
CTDSP1-212ENST00000494067 PTPN22Q9Y2R2 807 aa16.46■□□□□ 0.23
CTDSP1-212ENST00000494067 FAM196BA6NMK8 535 aa16.45■□□□□ 0.22
CTDSP1-212ENST00000494067 TLR2O60603 784 aa16.45■□□□□ 0.22
CTDSP1-212ENST00000494067 MAP4K4O95819 1239 aaPredicted RBP16.45■□□□□ 0.22
CTDSP1-212ENST00000494067 CCDC84Q86UT8 332 aaPredicted RBP16.45■□□□□ 0.22
CTDSP1-212ENST00000494067 ARHGAP39Q9C0H5 1083 aa16.45■□□□□ 0.22
CTDSP1-212ENST00000494067 PIH1D3Q9NQM4 214 aaKnown RBP16.45■□□□□ 0.22
CTDSP1-212ENST00000494067 PICK1Q9NRD5 415 aa16.45■□□□□ 0.22
CTDSP1-212ENST00000494067 RAI14Q9P0K7 980 aa16.45■□□□□ 0.22
CTDSP1-212ENST00000494067 LRP2BPQ9P2M1 347 aa16.45■□□□□ 0.22
CTDSP1-212ENST00000494067 KCNH4Q9UQ05 1017 aa16.45■□□□□ 0.22
CTDSP1-212ENST00000494067 EXOC6BQ9Y2D4 811 aa16.45■□□□□ 0.22
CTDSP1-212ENST00000494067 NDUFB9Q9Y6M9 179 aa16.45■□□□□ 0.22
CTDSP1-212ENST00000494067 ADGRA2Q96PE1 1338 aa16.45■□□□□ 0.22
CTDSP1-212ENST00000494067 RBBP6Q7Z6E9 1792 aaKnown RBP16.44■□□□□ 0.22
CTDSP1-212ENST00000494067 CTGFP29279 349 aa16.44■□□□□ 0.22
CTDSP1-212ENST00000494067 ZAP70P43403 619 aa16.44■□□□□ 0.22
CTDSP1-212ENST00000494067 RRP1BQ14684 758 aaKnown RBP16.44■□□□□ 0.22
CTDSP1-212ENST00000494067 TTC39AQ5SRH9 613 aa16.44■□□□□ 0.22
CTDSP1-212ENST00000494067 NBPF11Q86T75 865 aa16.44■□□□□ 0.22
CTDSP1-212ENST00000494067 SIRT2Q8IXJ6 389 aa16.44■□□□□ 0.22
CTDSP1-212ENST00000494067 C20orf194Q5TEA3 1177 aa16.43■□□□□ 0.22
CTDSP1-212ENST00000494067 ANKRD23Q86SG2 305 aa16.43■□□□□ 0.22
CTDSP1-212ENST00000494067 SH3RF3Q8TEJ3 882 aaPredicted RBP16.43■□□□□ 0.22
CTDSP1-212ENST00000494067 COL2A1P02458 1487 aaPredicted RBP16.42■□□□□ 0.22
CTDSP1-212ENST00000494067 CXCL11O14625 94 aa16.42■□□□□ 0.22
CTDSP1-212ENST00000494067 GNRH1P01148 92 aa16.42■□□□□ 0.22
CTDSP1-212ENST00000494067 MS4A1P11836 297 aa16.42■□□□□ 0.22
CTDSP1-212ENST00000494067 GPAT2Q6NUI2 795 aa16.42■□□□□ 0.22
CTDSP1-212ENST00000494067 FASTKD5Q7L8L6 764 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-212ENST00000494067 SCYL3Q8IZE3 742 aa16.42■□□□□ 0.22
CTDSP1-212ENST00000494067 COG6Q9Y2V7 657 aa16.42■□□□□ 0.22
CTDSP1-212ENST00000494067 LOC285556D6RIA3 1793 aa16.41■□□□□ 0.22
CTDSP1-212ENST00000494067 PDHXO00330 501 aa16.41■□□□□ 0.22
CTDSP1-212ENST00000494067 NPM3O75607 178 aaKnown RBP16.41■□□□□ 0.22
CTDSP1-212ENST00000494067 BAG3O95817 575 aa16.41■□□□□ 0.22
CTDSP1-212ENST00000494067 PTPRAP18433 802 aa16.41■□□□□ 0.22
CTDSP1-212ENST00000494067 ZNF512BQ96KM6 892 aaPredicted RBP16.41■□□□□ 0.22
CTDSP1-212ENST00000494067 TMEM106CQ9BVX2 250 aa16.41■□□□□ 0.22
CTDSP1-212ENST00000494067 OSBPL5Q9H0X9 879 aaPredicted RBP16.41■□□□□ 0.22
CTDSP1-212ENST00000494067 ANTXR1Q9H6X2 564 aa16.41■□□□□ 0.22
CTDSP1-212ENST00000494067 AATFQ9NY61 560 aaKnown RBP eCLIP16.41■□□□□ 0.22
CTDSP1-212ENST00000494067 ZHX2Q9Y6X8 837 aa16.41■□□□□ 0.22
CTDSP1-212ENST00000494067 DDX60LQ5H9U9 1706 aaKnown RBP16.41■□□□□ 0.22
CTDSP1-212ENST00000494067 MGAMO43451 1857 aa16.4■□□□□ 0.22
CTDSP1-212ENST00000494067 CTNND1O60716 968 aaKnown RBP16.4■□□□□ 0.22
CTDSP1-212ENST00000494067 IGSF3O75054 1194 aa16.4■□□□□ 0.22
CTDSP1-212ENST00000494067 ECM2O94769 699 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-212ENST00000494067 HOXD10P28358 340 aa16.4■□□□□ 0.22
CTDSP1-212ENST00000494067 PRMT2P55345 433 aa16.4■□□□□ 0.22
CTDSP1-212ENST00000494067 SHROOM1Q2M3G4 852 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-212ENST00000494067 SLC9C1Q4G0N8 1177 aa16.4■□□□□ 0.22
CTDSP1-212ENST00000494067 C17orf99Q6UX52 265 aa16.4■□□□□ 0.22
CTDSP1-212ENST00000494067 ZBTB40Q9NUA8 1239 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms