RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 CCL15-CCL14A0A0B4J2E2 113 aa10.01□□□□□ -0.81
HDAC6-234ENST00000493923 A0A1B0GUL7 405 aa10.01□□□□□ -0.81
HDAC6-234ENST00000493923 SPDYE5A6NIY4 337 aa10.01□□□□□ -0.81
HDAC6-234ENST00000493923 UNCXA6NJT0 531 aa10.01□□□□□ -0.81
HDAC6-234ENST00000493923 LDHBP07195 334 aaKnown RBP10.01□□□□□ -0.81
HDAC6-234ENST00000493923 NCLP19338 710 aaKnown RBP10.01□□□□□ -0.81
HDAC6-234ENST00000493923 PDE4AP27815 886 aa10.01□□□□□ -0.81
HDAC6-234ENST00000493923 TNNI2P48788 182 aa10.01□□□□□ -0.81
HDAC6-234ENST00000493923 CCL15Q16663 113 aa10.01□□□□□ -0.81
HDAC6-234ENST00000493923 FKBP1CQ5VVH2 108 aa10.01□□□□□ -0.81
HDAC6-234ENST00000493923 TBC1D9Q6ZT07 1266 aa10.01□□□□□ -0.81
HDAC6-234ENST00000493923 OTOP1Q7RTM1 612 aa10.01□□□□□ -0.81
HDAC6-234ENST00000493923 FAM83AQ86UY5 434 aa10.01□□□□□ -0.81
HDAC6-234ENST00000493923 USP40Q9NVE5 1235 aa10.01□□□□□ -0.81
HDAC6-234ENST00000493923 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-234ENST00000493923 SALL1Q9NSC2 1324 aa10.01□□□□□ -0.81
HDAC6-234ENST00000493923 IRF6O14896 467 aa10□□□□□ -0.81
HDAC6-234ENST00000493923 GNAI3P08754 354 aa10□□□□□ -0.81
HDAC6-234ENST00000493923 CLCN1P35523 988 aa10□□□□□ -0.81
HDAC6-234ENST00000493923 INHBEP58166 350 aa10□□□□□ -0.81
HDAC6-234ENST00000493923 MOGSQ13724 837 aa10□□□□□ -0.81
HDAC6-234ENST00000493923 FBXO46Q6PJ61 603 aaPredicted RBP10□□□□□ -0.81
HDAC6-234ENST00000493923 FAM151AQ8WW52 585 aa10□□□□□ -0.81
HDAC6-234ENST00000493923 NAP1L5Q96NT1 182 aaPredicted RBP10□□□□□ -0.81
HDAC6-234ENST00000493923 MAP7D2Q96T17 732 aa10□□□□□ -0.81
HDAC6-234ENST00000493923 ARHGAP39Q9C0H5 1083 aa10□□□□□ -0.81
HDAC6-234ENST00000493923 HMG20BQ9P0W2 317 aa10□□□□□ -0.81
HDAC6-234ENST00000493923 ZNF112Q9UJU3 913 aa10□□□□□ -0.81
HDAC6-234ENST00000493923 DENND2AQ9ULE3 1009 aa10□□□□□ -0.81
HDAC6-234ENST00000493923 TRIM17Q9Y577 477 aa10□□□□□ -0.81
HDAC6-234ENST00000493923 CEP290O15078 2479 aa10□□□□□ -0.81
HDAC6-234ENST00000493923 GAKO14976 1311 aa10□□□□□ -0.81
HDAC6-234ENST00000493923 MAST3O60307 1309 aa10□□□□□ -0.81
HDAC6-234ENST00000493923 DOCK2Q92608 1830 aa10□□□□□ -0.81
HDAC6-234ENST00000493923 RPAP1Q9BWH6 1393 aaPredicted RBP10□□□□□ -0.81
HDAC6-234ENST00000493923 PHIPQ8WWQ0 1821 aa9.99□□□□□ -0.81
HDAC6-234ENST00000493923 DDTLA6NHG4 134 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-234ENST00000493923 BTBD19C9JJ37 291 aa9.99□□□□□ -0.81
HDAC6-234ENST00000493923 WDHD1O75717 1129 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-234ENST00000493923 ECM2O94769 699 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-234ENST00000493923 ALDH1A1P00352 501 aa9.99□□□□□ -0.81
HDAC6-234ENST00000493923 GNAI2P04899 355 aa9.99□□□□□ -0.81
HDAC6-234ENST00000493923 CTGFP29279 349 aa9.99□□□□□ -0.81
HDAC6-234ENST00000493923 RGS3P49796 1198 aa9.99□□□□□ -0.81
HDAC6-234ENST00000493923 CCDC84Q86UT8 332 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-234ENST00000493923 NEUROD6Q96NK8 337 aa9.99□□□□□ -0.81
HDAC6-234ENST00000493923 GNL3LQ9NVN8 582 aaKnown RBP9.99□□□□□ -0.81
HDAC6-234ENST00000493923 TMOD2Q9NZR1 351 aa9.99□□□□□ -0.81
HDAC6-234ENST00000493923 ABCF2Q9UG63 623 aa9.99□□□□□ -0.81
HDAC6-234ENST00000493923 CSADQ9Y600 493 aa9.99□□□□□ -0.81
HDAC6-234ENST00000493923 PTPRFP10586 1907 aa9.98□□□□□ -0.81
HDAC6-234ENST00000493923 POTEFA5A3E0 1075 aa9.98□□□□□ -0.81
HDAC6-234ENST00000493923 PHF20L1A8MW92 1017 aa9.98□□□□□ -0.81
HDAC6-234ENST00000493923 SEMA3EO15041 775 aa9.98□□□□□ -0.81
HDAC6-234ENST00000493923 MCAMP43121 646 aa9.98□□□□□ -0.81
HDAC6-234ENST00000493923 GTF2A2P52657 109 aa9.98□□□□□ -0.81
HDAC6-234ENST00000493923 RHBDL3P58872 404 aa9.98□□□□□ -0.81
HDAC6-234ENST00000493923 MECOMQ03112 1051 aa9.98□□□□□ -0.81
HDAC6-234ENST00000493923 PPIL2Q13356 520 aa9.98□□□□□ -0.81
HDAC6-234ENST00000493923 TAF1CQ15572 869 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-234ENST00000493923 ERO1BQ86YB8 467 aa9.98□□□□□ -0.81
HDAC6-234ENST00000493923 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-234ENST00000493923 ZNF341Q9BYN7 854 aa9.98□□□□□ -0.81
HDAC6-234ENST00000493923 PDCL3Q9H2J4 239 aa9.98□□□□□ -0.81
HDAC6-234ENST00000493923 SNRKQ9NRH2 765 aa9.98□□□□□ -0.81
HDAC6-234ENST00000493923 SIPA1L1O43166 1804 aa9.98□□□□□ -0.81
HDAC6-234ENST00000493923 FAM196BA6NMK8 535 aa9.97□□□□□ -0.81
HDAC6-234ENST00000493923 IPO8O15397 1037 aaKnown RBP9.97□□□□□ -0.81
HDAC6-234ENST00000493923 GABBR2O75899 941 aa9.97□□□□□ -0.81
HDAC6-234ENST00000493923 BTDP43251 543 aa9.97□□□□□ -0.81
HDAC6-234ENST00000493923 SP3Q02447 781 aa9.97□□□□□ -0.81
HDAC6-234ENST00000493923 RRP1BQ14684 758 aaKnown RBP9.97□□□□□ -0.81
HDAC6-234ENST00000493923 PKN2Q16513 984 aaKnown RBP9.97□□□□□ -0.81
HDAC6-234ENST00000493923 ZKSCAN2Q63HK3 967 aa9.97□□□□□ -0.81
HDAC6-234ENST00000493923 DBNDD2Q9BQY9 259 aa9.97□□□□□ -0.81
HDAC6-234ENST00000493923 IDI2Q9BXS1 227 aa9.97□□□□□ -0.81
HDAC6-234ENST00000493923 TLR7Q9NYK1 1049 aaKnown RBP9.97□□□□□ -0.81
HDAC6-234ENST00000493923 PTPN22Q9Y2R2 807 aa9.97□□□□□ -0.81
HDAC6-234ENST00000493923 MROH7-TTC4A0A0A0MT08 1334 aa9.97□□□□□ -0.81
HDAC6-234ENST00000493923 CDK5RAP2Q96SN8 1893 aa9.97□□□□□ -0.81
HDAC6-234ENST00000493923 DOCK3Q8IZD9 2030 aa9.97□□□□□ -0.81
HDAC6-234ENST00000493923 ZBTB7BO15156 539 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-234ENST00000493923 CD44P16070 742 aaKnown RBP9.96□□□□□ -0.82
HDAC6-234ENST00000493923 ARID4AP29374 1257 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-234ENST00000493923 FGD1P98174 961 aa9.96□□□□□ -0.82
HDAC6-234ENST00000493923 ATP8B2P98198 1209 aa9.96□□□□□ -0.82
HDAC6-234ENST00000493923 PICALMQ13492 652 aa9.96□□□□□ -0.82
HDAC6-234ENST00000493923 AAMPQ13685 434 aa9.96□□□□□ -0.82
HDAC6-234ENST00000493923 DCAF15Q66K64 600 aa9.96□□□□□ -0.82
HDAC6-234ENST00000493923 GPAT2Q6NUI2 795 aa9.96□□□□□ -0.82
HDAC6-234ENST00000493923 SPATA5Q8NB90 893 aa9.96□□□□□ -0.82
HDAC6-234ENST00000493923 PANK1Q8TE04 598 aa9.96□□□□□ -0.82
HDAC6-234ENST00000493923 SSH3Q8TE77 659 aa9.96□□□□□ -0.82
HDAC6-234ENST00000493923 NSUN4Q96CB9 384 aaKnown RBP9.96□□□□□ -0.82
HDAC6-234ENST00000493923 FAM163AQ96GL9 167 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-234ENST00000493923 EFCC1Q9HA90 598 aa9.96□□□□□ -0.82
HDAC6-234ENST00000493923 KCNH4Q9UQ05 1017 aa9.96□□□□□ -0.82
HDAC6-234ENST00000493923 PTCH2Q9Y6C5 1203 aa9.96□□□□□ -0.82
HDAC6-234ENST00000493923 PDS5AQ29RF7 1337 aaKnown RBP9.96□□□□□ -0.82
HDAC6-234ENST00000493923 ADGRA2Q96PE1 1338 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms