RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 TRPM2O94759 1503 aa22.49■■□□□ 1.19
RNF40-203ENST00000493683 UGGT2Q9NYU1 1516 aa22.49■■□□□ 1.19
RNF40-203ENST00000493683 TOM1O60784 492 aa22.49■■□□□ 1.19
RNF40-203ENST00000493683 DNAJC21Q5F1R6 531 aaKnown RBP22.49■■□□□ 1.19
RNF40-203ENST00000493683 MYRIPQ8NFW9 859 aa22.49■■□□□ 1.19
RNF40-203ENST00000493683 RPGRIP1Q96KN7 1286 aa22.49■■□□□ 1.19
RNF40-203ENST00000493683 BICC1Q9H694 974 aaKnown RBP22.49■■□□□ 1.19
RNF40-203ENST00000493683 DKC1O60832 514 aaKnown RBP eCLIP22.49■■□□□ 1.19
RNF40-203ENST00000493683 ODF2LQ9ULJ1 636 aa22.49■■□□□ 1.19
RNF40-203ENST00000493683 MAPKBP1O60336 1514 aa22.49■■□□□ 1.19
RNF40-203ENST00000493683 NPC1L1Q9UHC9 1359 aa22.49■■□□□ 1.19
RNF40-203ENST00000493683 MTMR3Q13615 1198 aa22.49■■□□□ 1.19
RNF40-203ENST00000493683 ANGEL1Q9UNK9 670 aaKnown RBP22.49■■□□□ 1.19
RNF40-203ENST00000493683 NDUFAB1O14561 156 aa22.49■■□□□ 1.19
RNF40-203ENST00000493683 CETN3O15182 167 aa22.49■■□□□ 1.19
RNF40-203ENST00000493683 SMTNP53814 917 aa22.49■■□□□ 1.19
RNF40-203ENST00000493683 LMNTD2Q8IXW0 634 aa22.49■■□□□ 1.19
RNF40-203ENST00000493683 GOLGA6CA6NDK9 693 aa22.48■■□□□ 1.19
RNF40-203ENST00000493683 VIMP08670 466 aaKnown RBP22.48■■□□□ 1.19
RNF40-203ENST00000493683 GOLGA6DP0CG33 693 aa22.48■■□□□ 1.19
RNF40-203ENST00000493683 CCT6AP40227 531 aaKnown RBP22.48■■□□□ 1.19
RNF40-203ENST00000493683 CWF19L2Q2TBE0 894 aaKnown RBP22.48■■□□□ 1.19
RNF40-203ENST00000493683 TSPYL6Q8N831 410 aa22.48■■□□□ 1.19
RNF40-203ENST00000493683 GOLGA6AQ9NYA3 693 aa22.48■■□□□ 1.19
RNF40-203ENST00000493683 INSRP06213 1382 aa22.48■■□□□ 1.19
RNF40-203ENST00000493683 ZNF174Q15697 407 aa22.48■■□□□ 1.19
RNF40-203ENST00000493683 SLC9C1Q4G0N8 1177 aa22.48■■□□□ 1.19
RNF40-203ENST00000493683 MIGA1Q8NAN2 632 aa22.48■■□□□ 1.19
RNF40-203ENST00000493683 SMC1BQ8NDV3 1235 aa22.48■■□□□ 1.19
RNF40-203ENST00000493683 ABCC1P33527 1531 aa22.48■■□□□ 1.19
RNF40-203ENST00000493683 RIMS2Q9UQ26 1411 aa22.48■■□□□ 1.19
RNF40-203ENST00000493683 EYA2O00167 538 aa22.48■■□□□ 1.19
RNF40-203ENST00000493683 MBD4O95243 580 aa22.48■■□□□ 1.19
RNF40-203ENST00000493683 SYCE1Q8N0S2 351 aa22.48■■□□□ 1.19
RNF40-203ENST00000493683 SIRT1Q96EB6 747 aa22.48■■□□□ 1.19
RNF40-203ENST00000493683 GTF3C6Q969F1 213 aa22.47■■□□□ 1.19
RNF40-203ENST00000493683 FNBP1Q96RU3 617 aa22.47■■□□□ 1.19
RNF40-203ENST00000493683 KRBA2Q6ZNG9 492 aa22.47■■□□□ 1.19
RNF40-203ENST00000493683 C10orf67Q8IYJ2 551 aa22.47■■□□□ 1.19
RNF40-203ENST00000493683 CSGALNACT2Q8N6G5 542 aa22.47■■□□□ 1.19
RNF40-203ENST00000493683 WDR66Q8TBY9 1149 aa22.47■■□□□ 1.19
RNF40-203ENST00000493683 APPBP2Q92624 585 aa22.47■■□□□ 1.19
RNF40-203ENST00000493683 PAK2Q13177 524 aa22.47■■□□□ 1.19
RNF40-203ENST00000493683 DDB1Q16531 1140 aa22.47■■□□□ 1.19
RNF40-203ENST00000493683 LETM2Q2VYF4 491 aa22.47■■□□□ 1.19
RNF40-203ENST00000493683 ZNF365Q70YC5 407 aa22.47■■□□□ 1.19
RNF40-203ENST00000493683 ARHGAP24Q8N264 748 aa22.47■■□□□ 1.19
RNF40-203ENST00000493683 GBP1P32455 592 aa22.46■■□□□ 1.19
RNF40-203ENST00000493683 FAM204AQ9H8W3 233 aa22.46■■□□□ 1.19
RNF40-203ENST00000493683 PPFIA1Q13136 1202 aa22.46■■□□□ 1.19
RNF40-203ENST00000493683 CCDC51Q96ER9 411 aa22.46■■□□□ 1.19
RNF40-203ENST00000493683 LZTS2Q9BRK4 669 aa22.46■■□□□ 1.19
RNF40-203ENST00000493683 PLCB1Q9NQ66 1216 aa22.46■■□□□ 1.19
RNF40-203ENST00000493683 SNX14Q9Y5W7 946 aa22.46■■□□□ 1.19
RNF40-203ENST00000493683 NEDD9Q14511 834 aa22.46■■□□□ 1.19
RNF40-203ENST00000493683 INPP5BP32019 993 aa22.45■■□□□ 1.19
RNF40-203ENST00000493683 KIF24Q5T7B8 1368 aa22.45■■□□□ 1.18
RNF40-203ENST00000493683 UHRF1BP1Q6BDS2 1440 aa22.45■■□□□ 1.18
RNF40-203ENST00000493683 F8W031 263 aaPredicted RBP22.45■■□□□ 1.18
RNF40-203ENST00000493683 RNMTO43148 476 aaKnown RBP22.45■■□□□ 1.18
RNF40-203ENST00000493683 TNNI3KQ59H18 835 aa22.45■■□□□ 1.18
RNF40-203ENST00000493683 FPGT-TNNI3KV9GXZ4 949 aa22.45■■□□□ 1.18
RNF40-203ENST00000493683 PCDH11XQ9BZA7 1347 aa22.45■■□□□ 1.18
RNF40-203ENST00000493683 PCDH11YQ9BZA8 1340 aa22.45■■□□□ 1.18
RNF40-203ENST00000493683 PARP10Q53GL7 1025 aa22.45■■□□□ 1.18
RNF40-203ENST00000493683 CCDC84Q86UT8 332 aaPredicted RBP22.45■■□□□ 1.18
RNF40-203ENST00000493683 CBX8Q9HC52 389 aa22.45■■□□□ 1.18
RNF40-203ENST00000493683 SGSM2O43147 1006 aa22.45■■□□□ 1.18
RNF40-203ENST00000493683 PLBD2Q8NHP8 589 aa22.45■■□□□ 1.18
RNF40-203ENST00000493683 VCX3BQ9H321 246 aa22.45■■□□□ 1.18
RNF40-203ENST00000493683 U2AF2P26368 475 aaKnown RBP eCLIP22.44■■□□□ 1.18
RNF40-203ENST00000493683 SLC8A3P57103 927 aa22.44■■□□□ 1.18
RNF40-203ENST00000493683 MAIP1Q8WWC4 291 aa22.44■■□□□ 1.18
RNF40-203ENST00000493683 VPS16Q9H269 839 aa22.44■■□□□ 1.18
RNF40-203ENST00000493683 AGTPBP1Q9UPW5 1226 aa22.44■■□□□ 1.18
RNF40-203ENST00000493683 A2MP01023 1474 aa22.44■■□□□ 1.18
RNF40-203ENST00000493683 KRT25Q7Z3Z0 450 aa22.44■■□□□ 1.18
RNF40-203ENST00000493683 AFAP1L2Q8N4X5 818 aa22.44■■□□□ 1.18
RNF40-203ENST00000493683 ZKSCAN3Q9BRR0 538 aa22.44■■□□□ 1.18
RNF40-203ENST00000493683 RIOK3O14730 519 aaKnown RBP22.44■■□□□ 1.18
RNF40-203ENST00000493683 NFATC2IPQ8NCF5 419 aa22.44■■□□□ 1.18
RNF40-203ENST00000493683 PUM3Q15397 648 aaKnown RBP22.44■■□□□ 1.18
RNF40-203ENST00000493683 TTC38Q5R3I4 469 aa22.44■■□□□ 1.18
RNF40-203ENST00000493683 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.44■■□□□ 1.188e-8■■□□□ 14.5
RNF40-203ENST00000493683 FAM212AQ96EL1 285 aa22.43■■□□□ 1.18
RNF40-203ENST00000493683 ZWINTO95229 277 aa22.43■■□□□ 1.18
RNF40-203ENST00000493683 UTP14CQ5TAP6 766 aaKnown RBP22.43■■□□□ 1.18
RNF40-203ENST00000493683 GOLGA6BA6NDN3 693 aa22.43■■□□□ 1.18
RNF40-203ENST00000493683 STK10O94804 968 aaKnown RBP22.43■■□□□ 1.18
RNF40-203ENST00000493683 KRT5P13647 590 aa22.43■■□□□ 1.18
RNF40-203ENST00000493683 CARD6Q9BX69 1037 aa22.43■■□□□ 1.18
RNF40-203ENST00000493683 TM6SF1Q9BZW5 370 aa22.43■■□□□ 1.18
RNF40-203ENST00000493683 FBLN1P23142 703 aa22.42■■□□□ 1.18
RNF40-203ENST00000493683 METTL22Q9BUU2 404 aaPredicted RBP22.42■■□□□ 1.18
RNF40-203ENST00000493683 WDR7Q9Y4E6 1490 aa22.42■■□□□ 1.18
RNF40-203ENST00000493683 BACH1O14867 736 aa22.42■■□□□ 1.18
RNF40-203ENST00000493683 BIRC3Q13489 604 aa22.42■■□□□ 1.18
RNF40-203ENST00000493683 TSNAXIP1Q2TAA8 658 aa22.42■■□□□ 1.18
RNF40-203ENST00000493683 DIS3L2Q8IYB7 885 aaKnown RBP22.42■■□□□ 1.18
RNF40-203ENST00000493683 VPS52Q8N1B4 723 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms