RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 RRS1Q15050 365 aaKnown RBP7.79□□□□□ -1.16
VPS13B-205ENST00000493587 E4F1Q66K89 784 aaPredicted RBP7.79□□□□□ -1.16
VPS13B-205ENST00000493587 RCSD1Q6JBY9 416 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 GET4Q7L5D6 327 aaPredicted RBP7.79□□□□□ -1.16
VPS13B-205ENST00000493587 ANKLE2Q86XL3 938 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 FAM81AQ8TBF8 368 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 SSH1Q8WYL5 1049 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 ANO2Q9NQ90 1003 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 TTC41PQ6P2S7 1318 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 EIF4E1BA6NMX2 242 aaKnown RBP7.79□□□□□ -1.16
VPS13B-205ENST00000493587 CHL1O00533 1208 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 SLC8A1P32418 973 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 GNGT1P63211 74 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 CASP8Q14790 479 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 TDRD7Q8NHU6 1098 aaKnown RBP7.79□□□□□ -1.16
VPS13B-205ENST00000493587 MIPOL1Q8TD10 442 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 NOC3LQ8WTT2 800 aaKnown RBP7.79□□□□□ -1.16
VPS13B-205ENST00000493587 CCDC12Q8WUD4 166 aaPredicted RBP7.79□□□□□ -1.16
VPS13B-205ENST00000493587 GCC1Q96CN9 775 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 LARP6Q9BRS8 491 aaKnown RBP7.79□□□□□ -1.16
VPS13B-205ENST00000493587 ABCB6Q9NP58 842 aa7.79□□□□□ -1.16
VPS13B-205ENST00000493587 KAT6BQ8WYB5 2073 aa7.78□□□□□ -1.16
VPS13B-205ENST00000493587 CHMP4BP1P59074 171 aa7.78□□□□□ -1.16
VPS13B-205ENST00000493587 MYO1EQ12965 1108 aa7.78□□□□□ -1.16
VPS13B-205ENST00000493587 VPS53Q5VIR6 699 aa7.78□□□□□ -1.16
VPS13B-205ENST00000493587 ATF7IPQ6VMQ6 1270 aa7.78□□□□□ -1.16
VPS13B-205ENST00000493587 FERMT3Q86UX7 667 aa7.78□□□□□ -1.16
VPS13B-205ENST00000493587 CCDC50Q8IVM0 306 aa7.78□□□□□ -1.16
VPS13B-205ENST00000493587 RNF168Q8IYW5 571 aaPredicted RBP7.78□□□□□ -1.16
VPS13B-205ENST00000493587 ZCRB1Q8TBF4 217 aaKnown RBP7.78□□□□□ -1.16
VPS13B-205ENST00000493587 OSBPL9Q96SU4 736 aa7.78□□□□□ -1.16
VPS13B-205ENST00000493587 IRX2Q9BZI1 471 aaPredicted RBP7.78□□□□□ -1.16
VPS13B-205ENST00000493587 HOMER3Q9NSC5 361 aa7.78□□□□□ -1.16
VPS13B-205ENST00000493587 BAIAP2L1Q9UHR4 511 aa7.78□□□□□ -1.16
VPS13B-205ENST00000493587 TBC1D2BQ9UPU7 963 aa7.78□□□□□ -1.16
VPS13B-205ENST00000493587 SALL3Q9BXA9 1300 aa7.78□□□□□ -1.16
VPS13B-205ENST00000493587 C1orf167Q5SNV9 1468 aa7.78□□□□□ -1.16
VPS13B-205ENST00000493587 PSDA5PKW4 1024 aaPredicted RBP7.78□□□□□ -1.16
VPS13B-205ENST00000493587 POTEB2H3BUK9 544 aa7.78□□□□□ -1.16
VPS13B-205ENST00000493587 ZBTB7BO15156 539 aaPredicted RBP7.78□□□□□ -1.16
VPS13B-205ENST00000493587 NAT1P18440 290 aa7.78□□□□□ -1.16
VPS13B-205ENST00000493587 PAPOLAP51003 745 aaKnown RBP7.78□□□□□ -1.16
VPS13B-205ENST00000493587 PRPF4BQ13523 1007 aaKnown RBP7.78□□□□□ -1.16
VPS13B-205ENST00000493587 CCDC150Q8NCX0 1101 aa7.78□□□□□ -1.16
VPS13B-205ENST00000493587 PHC3Q8NDX5 983 aa7.78□□□□□ -1.16
VPS13B-205ENST00000493587 MAP3K19Q56UN5 1328 aa7.78□□□□□ -1.16
VPS13B-205ENST00000493587 PHLPP2Q6ZVD8 1323 aa7.78□□□□□ -1.16
VPS13B-205ENST00000493587 NUTM2FA1L443 756 aa7.77□□□□□ -1.16
VPS13B-205ENST00000493587 ZEB2O60315 1214 aa7.77□□□□□ -1.16
VPS13B-205ENST00000493587 F13A1P00488 732 aa7.77□□□□□ -1.16
VPS13B-205ENST00000493587 U2AF1L5P0DN76 240 aaPredicted RBP7.77□□□□□ -1.16
VPS13B-205ENST00000493587 GNAT1P11488 350 aa7.77□□□□□ -1.16
VPS13B-205ENST00000493587 SLC8A3P57103 927 aa7.77□□□□□ -1.16
VPS13B-205ENST00000493587 U2AF1Q01081 240 aaKnown RBP eCLIP7.77□□□□□ -1.16
VPS13B-205ENST00000493587 AKAP17AQ02040 695 aaKnown RBP7.77□□□□□ -1.16
VPS13B-205ENST00000493587 IL17RAQ96F46 866 aa7.77□□□□□ -1.16
VPS13B-205ENST00000493587 SPAG5Q96R06 1193 aa7.77□□□□□ -1.16
VPS13B-205ENST00000493587 EPAS1Q99814 870 aa7.77□□□□□ -1.16
VPS13B-205ENST00000493587 LZTS2Q9BRK4 669 aa7.77□□□□□ -1.16
VPS13B-205ENST00000493587 BATF3Q9NR55 127 aa7.77□□□□□ -1.16
VPS13B-205ENST00000493587 PAPOLBQ9NRJ5 636 aaKnown RBP7.77□□□□□ -1.16
VPS13B-205ENST00000493587 TPX2Q9ULW0 747 aaKnown RBP7.77□□□□□ -1.16
VPS13B-205ENST00000493587 NOB1Q9ULX3 412 aaKnown RBP7.77□□□□□ -1.16
VPS13B-205ENST00000493587 KDM4FA0A1W2PPD8 638 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 SASH1O94885 1247 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 KRT85P78386 507 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 CCDC15Q0P6D6 951 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 RBM33Q96EV2 1170 aaKnown RBP7.77□□□□□ -1.17
VPS13B-205ENST00000493587 INTS4Q96HW7 963 aaKnown RBP7.77□□□□□ -1.17
VPS13B-205ENST00000493587 GDAP1L1Q96MZ0 367 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 KCPQ6ZWJ8 1503 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 BCORQ6W2J9 1755 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 MAP2K7O14733 419 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 CDC25BP30305 580 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 HSPA4P34932 840 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 SDCCAG8Q86SQ7 713 aaPredicted RBP7.77□□□□□ -1.17
VPS13B-205ENST00000493587 HOOK3Q86VS8 718 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 PARP9Q8IXQ6 854 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 RBM12BQ8IXT5 1001 aaKnown RBP7.77□□□□□ -1.17
VPS13B-205ENST00000493587 AMOTL1Q8IY63 956 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 C17orf50Q8WW18 174 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 TCP11Q8WWU5 503 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 TBC1D5Q92609 795 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 CFAP53Q96M91 514 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 UTP14AQ9BVJ6 771 aaKnown RBP7.77□□□□□ -1.17
VPS13B-205ENST00000493587 CAPS2Q9BXY5 557 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 RANBP17Q9H2T7 1088 aaKnown RBP7.77□□□□□ -1.17
VPS13B-205ENST00000493587 KAT14Q9H8E8 782 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 ATP6V0A4Q9HBG4 840 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 MBIPQ9NS73 344 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 SPEF2Q9C093 1822 aa7.77□□□□□ -1.17
VPS13B-205ENST00000493587 ZSCAN9O15535 394 aaPredicted RBP7.76□□□□□ -1.17
VPS13B-205ENST00000493587 CD151P48509 253 aa7.76□□□□□ -1.17
VPS13B-205ENST00000493587 TSPYL6Q8N831 410 aa7.76□□□□□ -1.17
VPS13B-205ENST00000493587 IGSF22Q8N9C0 903 aa7.76□□□□□ -1.17
VPS13B-205ENST00000493587 TSR2Q969E8 191 aaKnown RBP7.76□□□□□ -1.17
VPS13B-205ENST00000493587 ZBED6P86452 979 aa7.76□□□□□ -1.17
VPS13B-205ENST00000493587 EXOSC9Q06265 439 aaKnown RBP7.76□□□□□ -1.17
VPS13B-205ENST00000493587 SF3B2Q13435 895 aaKnown RBP7.76□□□□□ -1.17
VPS13B-205ENST00000493587 CUL3Q13618 768 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms