RNA–Protein interactions for RNA: ENST00000493358.1

SNED1-212, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-212ENST00000493358 CCDC158Q5M9N0 1113 aa16.46■□□□□ 0.23
SNED1-212ENST00000493358 TTC39AQ5SRH9 613 aa16.46■□□□□ 0.23
SNED1-212ENST00000493358 NOL9Q5SY16 702 aaKnown RBP16.46■□□□□ 0.23
SNED1-212ENST00000493358 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.46■□□□□ 0.23
SNED1-212ENST00000493358 FAM163AQ96GL9 167 aaPredicted RBP16.46■□□□□ 0.23
SNED1-212ENST00000493358 PICK1Q9NRD5 415 aa16.46■□□□□ 0.23
SNED1-212ENST00000493358 HMG20BQ9P0W2 317 aa16.46■□□□□ 0.23
SNED1-212ENST00000493358 PTPN22Q9Y2R2 807 aa16.46■□□□□ 0.23
SNED1-212ENST00000493358 MYH1P12882 1939 aa16.46■□□□□ 0.23
SNED1-212ENST00000493358 BTBD19C9JJ37 291 aa16.45■□□□□ 0.22
SNED1-212ENST00000493358 SURF6O75683 361 aaKnown RBP16.45■□□□□ 0.22
SNED1-212ENST00000493358 MAP4K4O95819 1239 aaPredicted RBP16.45■□□□□ 0.22
SNED1-212ENST00000493358 LRP2BPQ9P2M1 347 aa16.45■□□□□ 0.22
SNED1-212ENST00000493358 ZNF112Q9UJU3 913 aa16.45■□□□□ 0.22
SNED1-212ENST00000493358 RFX7Q2KHR2 1363 aa16.45■□□□□ 0.22
SNED1-212ENST00000493358 TLR2O60603 784 aa16.44■□□□□ 0.22
SNED1-212ENST00000493358 ATP8B2P98198 1209 aa16.44■□□□□ 0.22
SNED1-212ENST00000493358 POLA2Q14181 598 aa16.44■□□□□ 0.22
SNED1-212ENST00000493358 TNNI3KQ59H18 835 aa16.44■□□□□ 0.22
SNED1-212ENST00000493358 SSH3Q8TE77 659 aa16.44■□□□□ 0.22
SNED1-212ENST00000493358 C1orf115Q9H7X2 142 aa16.44■□□□□ 0.22
SNED1-212ENST00000493358 GPR108Q9NPR9 543 aa16.44■□□□□ 0.22
SNED1-212ENST00000493358 FPGT-TNNI3KV9GXZ4 949 aa16.44■□□□□ 0.22
SNED1-212ENST00000493358 GPR75-ASB3A0A0A6YYF3 556 aa16.43■□□□□ 0.22
SNED1-212ENST00000493358 MS4A1P11836 297 aa16.43■□□□□ 0.22
SNED1-212ENST00000493358 MCAMP43121 646 aa16.43■□□□□ 0.22
SNED1-212ENST00000493358 PI16Q6UXB8 463 aa16.43■□□□□ 0.22
SNED1-212ENST00000493358 ANKRD23Q86SG2 305 aa16.43■□□□□ 0.22
SNED1-212ENST00000493358 SCYL3Q8IZE3 742 aa16.43■□□□□ 0.22
SNED1-212ENST00000493358 KCNH4Q9UQ05 1017 aa16.43■□□□□ 0.22
SNED1-212ENST00000493358 TBC1D9Q6ZT07 1266 aa16.42■□□□□ 0.22
SNED1-212ENST00000493358 NBPF11Q86T75 865 aa16.42■□□□□ 0.22
SNED1-212ENST00000493358 ZFPM1Q8IX07 1006 aa16.42■□□□□ 0.22
SNED1-212ENST00000493358 NSUN4Q96CB9 384 aaKnown RBP16.42■□□□□ 0.22
SNED1-212ENST00000493358 PARK7Q99497 189 aaKnown RBP16.42■□□□□ 0.22
SNED1-212ENST00000493358 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.42■□□□□ 0.22
SNED1-212ENST00000493358 COL2A1P02458 1487 aaPredicted RBP16.42■□□□□ 0.22
SNED1-212ENST00000493358 HTTP42858 3142 aa16.41■□□□□ 0.22
SNED1-212ENST00000493358 ATRNL1Q5VV63 1379 aa16.41■□□□□ 0.22
SNED1-212ENST00000493358 PDHXO00330 501 aa16.41■□□□□ 0.22
SNED1-212ENST00000493358 CXCL11O14625 94 aa16.41■□□□□ 0.22
SNED1-212ENST00000493358 NPM3O75607 178 aaKnown RBP16.41■□□□□ 0.22
SNED1-212ENST00000493358 BAG3O95817 575 aa16.41■□□□□ 0.22
SNED1-212ENST00000493358 GNRH1P01148 92 aa16.41■□□□□ 0.22
SNED1-212ENST00000493358 PLCG2P16885 1265 aa16.41■□□□□ 0.22
SNED1-212ENST00000493358 SLC9C1Q4G0N8 1177 aa16.41■□□□□ 0.22
SNED1-212ENST00000493358 NAA16Q6N069 864 aaPredicted RBP16.41■□□□□ 0.22
SNED1-212ENST00000493358 DDX4Q9NQI0 724 aaKnown RBP16.41■□□□□ 0.22
SNED1-212ENST00000493358 CENPFP49454 3210 aa16.4■□□□□ 0.22
SNED1-212ENST00000493358 DDTLA6NHG4 134 aaPredicted RBP16.4■□□□□ 0.22
SNED1-212ENST00000493358 CTNND1O60716 968 aaKnown RBP16.4■□□□□ 0.22
SNED1-212ENST00000493358 LACTBP83111 547 aaPredicted RBP16.4■□□□□ 0.22
SNED1-212ENST00000493358 FASTKD5Q7L8L6 764 aaKnown RBP16.4■□□□□ 0.22
SNED1-212ENST00000493358 ERC1Q8IUD2 1116 aa16.4■□□□□ 0.22
SNED1-212ENST00000493358 TEX11Q8IYF3 940 aa16.4■□□□□ 0.22
SNED1-212ENST00000493358 DBNDD2Q9BQY9 259 aa16.4■□□□□ 0.22
SNED1-212ENST00000493358 TMEM106CQ9BVX2 250 aa16.4■□□□□ 0.22
SNED1-212ENST00000493358 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.4■□□□□ 0.22
SNED1-212ENST00000493358 SNRKQ9NRH2 765 aa16.4■□□□□ 0.22
SNED1-212ENST00000493358 ZHX2Q9Y6X8 837 aa16.4■□□□□ 0.22
SNED1-212ENST00000493358 MYH8P13535 1937 aa16.4■□□□□ 0.22
SNED1-212ENST00000493358 LOC285556D6RIA3 1793 aa16.4■□□□□ 0.22
SNED1-212ENST00000493358 ZBTB7BO15156 539 aaPredicted RBP16.39■□□□□ 0.21
SNED1-212ENST00000493358 RLBP1P12271 317 aa16.39■□□□□ 0.21
SNED1-212ENST00000493358 PTPRAP18433 802 aa16.39■□□□□ 0.21
SNED1-212ENST00000493358 PRMT2P55345 433 aa16.39■□□□□ 0.21
SNED1-212ENST00000493358 RHBDL3P58872 404 aa16.39■□□□□ 0.21
SNED1-212ENST00000493358 GADL1Q6ZQY3 521 aa16.39■□□□□ 0.21
SNED1-212ENST00000493358 ARMC5Q96C12 935 aa16.39■□□□□ 0.21
SNED1-212ENST00000493358 SIPA1L1O43166 1804 aa16.39■□□□□ 0.21
SNED1-212ENST00000493358 DOCK3Q8IZD9 2030 aa16.38■□□□□ 0.21
SNED1-212ENST00000493358 PHF20L1A8MW92 1017 aa16.38■□□□□ 0.21
SNED1-212ENST00000493358 IGSF3O75054 1194 aa16.38■□□□□ 0.21
SNED1-212ENST00000493358 HOXD10P28358 340 aa16.38■□□□□ 0.21
SNED1-212ENST00000493358 SH3BP5LQ7L8J4 393 aa16.38■□□□□ 0.21
SNED1-212ENST00000493358 TRIM34Q9BYJ4 488 aa16.38■□□□□ 0.21
SNED1-212ENST00000493358 OSBPL5Q9H0X9 879 aaPredicted RBP16.38■□□□□ 0.21
SNED1-212ENST00000493358 CPA4Q9UI42 421 aa16.38■□□□□ 0.21
SNED1-212ENST00000493358 NOP58Q9Y2X3 529 aaKnown RBP16.38■□□□□ 0.21
SNED1-212ENST00000493358 PTCH2Q9Y6C5 1203 aa16.38■□□□□ 0.21
SNED1-212ENST00000493358 MYH7P12883 1935 aa16.38■□□□□ 0.21
SNED1-212ENST00000493358 NAV1Q8NEY1 1877 aa16.37■□□□□ 0.21
SNED1-212ENST00000493358 A0A0G2JLL6 359 aaPredicted RBP16.37■□□□□ 0.21
SNED1-212ENST00000493358 TBC1D12O60347 775 aa16.37■□□□□ 0.21
SNED1-212ENST00000493358 MAP3K10Q02779 954 aa16.37■□□□□ 0.21
SNED1-212ENST00000493358 HSP90AB4PQ58FF6 505 aa16.37■□□□□ 0.21
SNED1-212ENST00000493358 PRRT2Q7Z6L0 340 aaPredicted RBP16.37■□□□□ 0.21
SNED1-212ENST00000493358 ZNF384Q8TF68 577 aa16.37■□□□□ 0.21
SNED1-212ENST00000493358 ZNF512BQ96KM6 892 aaPredicted RBP16.37■□□□□ 0.21
SNED1-212ENST00000493358 AATFQ9NY61 560 aaKnown RBP eCLIP16.37■□□□□ 0.21
SNED1-212ENST00000493358 TRIM75PA6NK02 468 aa16.36■□□□□ 0.21
SNED1-212ENST00000493358 FMNL1O95466 1100 aaPredicted RBP16.36■□□□□ 0.21
SNED1-212ENST00000493358 PRPF38BQ5VTL8 546 aaKnown RBP16.36■□□□□ 0.21
SNED1-212ENST00000493358 CEP85Q6P2H3 762 aa16.36■□□□□ 0.21
SNED1-212ENST00000493358 C17orf99Q6UX52 265 aa16.36■□□□□ 0.21
SNED1-212ENST00000493358 PANK1Q8TE04 598 aa16.36■□□□□ 0.21
SNED1-212ENST00000493358 TBC1D2Q9BYX2 928 aa16.36■□□□□ 0.21
SNED1-212ENST00000493358 ARHGAP39Q9C0H5 1083 aa16.36■□□□□ 0.21
SNED1-212ENST00000493358 CCDC8Q9H0W5 538 aaPredicted RBP16.36■□□□□ 0.21
SNED1-212ENST00000493358 DHX36Q9H2U1 1008 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms