RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 ZNF341Q9BYN7 854 aa12.95□□□□□ -0.34
CDC42SE1-206ENST00000492796 ECHDC1Q9NTX5 307 aa12.95□□□□□ -0.34
CDC42SE1-206ENST00000492796 PAG1Q9NWQ8 432 aa12.95□□□□□ -0.34
CDC42SE1-206ENST00000492796 AATFQ9NY61 560 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDC42SE1-206ENST00000492796 CYP7A1P22680 504 aa12.94□□□□□ -0.34
CDC42SE1-206ENST00000492796 CTCFP49711 727 aaPredicted RBP12.94□□□□□ -0.34
CDC42SE1-206ENST00000492796 MAP3K9P80192 1104 aa12.94□□□□□ -0.34
CDC42SE1-206ENST00000492796 ADGRA1Q86SQ6 560 aa12.94□□□□□ -0.34
CDC42SE1-206ENST00000492796 TEX11Q8IYF3 940 aa12.94□□□□□ -0.34
CDC42SE1-206ENST00000492796 MAGEB6Q8N7X4 407 aa12.94□□□□□ -0.34
CDC42SE1-206ENST00000492796 EXOC6Q8TAG9 804 aa12.94□□□□□ -0.34
CDC42SE1-206ENST00000492796 CSRNP1Q96S65 589 aa12.94□□□□□ -0.34
CDC42SE1-206ENST00000492796 ZIC5Q96T25 663 aa12.94□□□□□ -0.34
CDC42SE1-206ENST00000492796 BOLA2Q9H3K6 86 aa12.94□□□□□ -0.34
CDC42SE1-206ENST00000492796 DDX4Q9NQI0 724 aaKnown RBP12.94□□□□□ -0.34
CDC42SE1-206ENST00000492796 ZBTB47Q9UFB7 747 aaPredicted RBP12.94□□□□□ -0.34
CDC42SE1-206ENST00000492796 CSADQ9Y600 493 aa12.94□□□□□ -0.34
CDC42SE1-206ENST00000492796 TTC41PQ6P2S7 1318 aa12.93□□□□□ -0.34
CDC42SE1-206ENST00000492796 FOXN1O15353 648 aa12.93□□□□□ -0.34
CDC42SE1-206ENST00000492796 SREBF2Q12772 1141 aa12.93□□□□□ -0.34
CDC42SE1-206ENST00000492796 SPRYD7Q5W111 196 aa12.93□□□□□ -0.34
CDC42SE1-206ENST00000492796 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.93□□□□□ -0.34
CDC42SE1-206ENST00000492796 ZSCAN29Q8IWY8 852 aaPredicted RBP12.93□□□□□ -0.34
CDC42SE1-206ENST00000492796 ZFPM1Q8IX07 1006 aa12.93□□□□□ -0.34
CDC42SE1-206ENST00000492796 SH3RF3Q8TEJ3 882 aaPredicted RBP12.93□□□□□ -0.34
CDC42SE1-206ENST00000492796 WNK4Q96J92 1243 aa12.93□□□□□ -0.34
CDC42SE1-206ENST00000492796 CLMNQ96JQ2 1002 aa12.93□□□□□ -0.34
CDC42SE1-206ENST00000492796 WRNIP1Q96S55 665 aa12.93□□□□□ -0.34
CDC42SE1-206ENST00000492796 OSBPL5Q9H0X9 879 aaPredicted RBP12.93□□□□□ -0.34
CDC42SE1-206ENST00000492796 RWDD1Q9H446 243 aaPredicted RBP12.93□□□□□ -0.34
CDC42SE1-206ENST00000492796 SAGE1Q9NXZ1 904 aa12.93□□□□□ -0.34
CDC42SE1-206ENST00000492796 PDE6AP16499 860 aa12.92□□□□□ -0.34
CDC42SE1-206ENST00000492796 VGLL4Q14135 290 aa12.92□□□□□ -0.34
CDC42SE1-206ENST00000492796 SLC9C2Q5TAH2 1124 aa12.92□□□□□ -0.34
CDC42SE1-206ENST00000492796 SH3BP5LQ7L8J4 393 aa12.92□□□□□ -0.34
CDC42SE1-206ENST00000492796 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.92□□□□□ -0.34
CDC42SE1-206ENST00000492796 ELP3Q9H9T3 547 aa12.92□□□□□ -0.34
CDC42SE1-206ENST00000492796 PCNTO95613 3336 aa12.91□□□□□ -0.34
CDC42SE1-206ENST00000492796 FLT1P17948 1338 aa12.91□□□□□ -0.34
CDC42SE1-206ENST00000492796 DOCK1Q14185 1865 aa12.91□□□□□ -0.34
CDC42SE1-206ENST00000492796 NAV1Q8NEY1 1877 aa12.91□□□□□ -0.34
CDC42SE1-206ENST00000492796 DDX60LQ5H9U9 1706 aaKnown RBP12.91□□□□□ -0.34
CDC42SE1-206ENST00000492796 DDTLA6NHG4 134 aaPredicted RBP12.91□□□□□ -0.34
CDC42SE1-206ENST00000492796 MANSC4A6NHS7 340 aaPredicted RBP12.91□□□□□ -0.34
CDC42SE1-206ENST00000492796 ERC2O15083 957 aa12.91□□□□□ -0.34
CDC42SE1-206ENST00000492796 SLC34A2O95436 690 aa12.91□□□□□ -0.34
CDC42SE1-206ENST00000492796 INHBEP58166 350 aa12.91□□□□□ -0.34
CDC42SE1-206ENST00000492796 MAP3K10Q02779 954 aa12.91□□□□□ -0.34
CDC42SE1-206ENST00000492796 ANKRD45Q5TZF3 282 aa12.91□□□□□ -0.34
CDC42SE1-206ENST00000492796 ZSCAN25Q6NSZ9 544 aa12.91□□□□□ -0.34
CDC42SE1-206ENST00000492796 MIGA2Q7L4E1 593 aa12.91□□□□□ -0.34
CDC42SE1-206ENST00000492796 SMC5Q8IY18 1101 aa12.91□□□□□ -0.34
CDC42SE1-206ENST00000492796 OPTNQ96CV9 577 aa12.91□□□□□ -0.34
CDC42SE1-206ENST00000492796 DHX36Q9H2U1 1008 aaKnown RBP12.91□□□□□ -0.34
CDC42SE1-206ENST00000492796 ZNF112Q9UJU3 913 aa12.91□□□□□ -0.34
CDC42SE1-206ENST00000492796 ZNF532Q9HCE3 1301 aa12.9□□□□□ -0.34
CDC42SE1-206ENST00000492796 SIPA1L1O43166 1804 aa12.9□□□□□ -0.34
CDC42SE1-206ENST00000492796 MYH1P12882 1939 aa12.9□□□□□ -0.34
CDC42SE1-206ENST00000492796 TCRBV5S4A2TA0A5A2 114 aa12.9□□□□□ -0.34
CDC42SE1-206ENST00000492796 SPDYE5A6NIY4 337 aa12.9□□□□□ -0.34
CDC42SE1-206ENST00000492796 TBC1D12O60347 775 aa12.9□□□□□ -0.34
CDC42SE1-206ENST00000492796 GLRX3O76003 335 aaKnown RBP12.9□□□□□ -0.34
CDC42SE1-206ENST00000492796 HSPA8P11142 646 aaKnown RBP12.9□□□□□ -0.34
CDC42SE1-206ENST00000492796 MX1P20591 662 aa12.9□□□□□ -0.34
CDC42SE1-206ENST00000492796 ADD2P35612 726 aa12.9□□□□□ -0.34
CDC42SE1-206ENST00000492796 TM4SF4P48230 202 aa12.9□□□□□ -0.34
CDC42SE1-206ENST00000492796 DYNLL1P63167 89 aaKnown RBP12.9□□□□□ -0.34
CDC42SE1-206ENST00000492796 MKRN3Q13064 507 aaKnown RBP12.9□□□□□ -0.34
CDC42SE1-206ENST00000492796 NOL9Q5SY16 702 aaKnown RBP12.9□□□□□ -0.34
CDC42SE1-206ENST00000492796 MIGA1Q8NAN2 632 aa12.9□□□□□ -0.34
CDC42SE1-206ENST00000492796 TGFBRAP1Q8WUH2 860 aa12.9□□□□□ -0.34
CDC42SE1-206ENST00000492796 EDC3Q96F86 508 aaKnown RBP12.9□□□□□ -0.34
CDC42SE1-206ENST00000492796 RIOK1Q9BRS2 568 aaKnown RBP12.9□□□□□ -0.34
CDC42SE1-206ENST00000492796 PRDM10Q9NQV6 1147 aa12.9□□□□□ -0.34
CDC42SE1-206ENST00000492796 SNCAIPQ9Y6H5 919 aa12.9□□□□□ -0.34
CDC42SE1-206ENST00000492796 SALL3Q9BXA9 1300 aa12.89□□□□□ -0.35
CDC42SE1-206ENST00000492796 MAGEB6P1A0A0J9YX57 407 aa12.89□□□□□ -0.35
CDC42SE1-206ENST00000492796 GJA5P36382 358 aa12.89□□□□□ -0.35
CDC42SE1-206ENST00000492796 UBE3CQ15386 1083 aa12.89□□□□□ -0.35
CDC42SE1-206ENST00000492796 ERO1BQ86YB8 467 aa12.89□□□□□ -0.35
CDC42SE1-206ENST00000492796 MAPKAPK5Q8IW41 473 aa12.89□□□□□ -0.35
CDC42SE1-206ENST00000492796 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
CDC42SE1-206ENST00000492796 ZKSCAN4Q969J2 545 aaPredicted RBP12.89□□□□□ -0.35
CDC42SE1-206ENST00000492796 RNF186Q9NXI6 227 aa12.89□□□□□ -0.35
CDC42SE1-206ENST00000492796 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.89□□□□□ -0.35
CDC42SE1-206ENST00000492796 PI4KBQ9UBF8 816 aa12.89□□□□□ -0.35
CDC42SE1-206ENST00000492796 HERC5Q9UII4 1024 aaKnown RBP12.89□□□□□ -0.35
CDC42SE1-206ENST00000492796 ATAD5Q96QE3 1844 aa12.88□□□□□ -0.35
CDC42SE1-206ENST00000492796 ALDH1A1P00352 501 aa12.88□□□□□ -0.35
CDC42SE1-206ENST00000492796 INPP5BP32019 993 aa12.88□□□□□ -0.35
CDC42SE1-206ENST00000492796 USP5P45974 858 aa12.88□□□□□ -0.35
CDC42SE1-206ENST00000492796 LBX1P52954 281 aa12.88□□□□□ -0.35
CDC42SE1-206ENST00000492796 PPATQ06203 517 aa12.88□□□□□ -0.35
CDC42SE1-206ENST00000492796 PPIL2Q13356 520 aa12.88□□□□□ -0.35
CDC42SE1-206ENST00000492796 LRRFIP1Q32MZ4 808 aaKnown RBP12.88□□□□□ -0.35
CDC42SE1-206ENST00000492796 TSHZ3Q63HK5 1081 aa12.88□□□□□ -0.35
CDC42SE1-206ENST00000492796 KBTBD3Q8NAB2 608 aa12.88□□□□□ -0.35
CDC42SE1-206ENST00000492796 PI4K2BQ8TCG2 481 aa12.88□□□□□ -0.35
CDC42SE1-206ENST00000492796 OTUD7AQ8TE49 926 aaPredicted RBP12.88□□□□□ -0.35
CDC42SE1-206ENST00000492796 OTUD5Q96G74 571 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms