RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 FAM43AQ8N2R8 423 aa10.77□□□□□ -0.69
NUP50-217ENST00000491860 SPATA5Q8NB90 893 aa10.77□□□□□ -0.69
NUP50-217ENST00000491860 ZNF333Q96JL9 665 aa10.77□□□□□ -0.69
NUP50-217ENST00000491860 NOL10Q9BSC4 688 aaKnown RBP10.77□□□□□ -0.69
NUP50-217ENST00000491860 TBC1D2Q9BYX2 928 aa10.77□□□□□ -0.69
NUP50-217ENST00000491860 FAM198AQ9UFP1 575 aa10.77□□□□□ -0.69
NUP50-217ENST00000491860 COL2A1P02458 1487 aaPredicted RBP10.76□□□□□ -0.69
NUP50-217ENST00000491860 GPR75-ASB3A0A0A6YYF3 556 aa10.76□□□□□ -0.69
NUP50-217ENST00000491860 BTBD19C9JJ37 291 aa10.76□□□□□ -0.69
NUP50-217ENST00000491860 TBC1D12O60347 775 aa10.76□□□□□ -0.69
NUP50-217ENST00000491860 RGS3P49796 1198 aa10.76□□□□□ -0.69
NUP50-217ENST00000491860 MAP3K10Q02779 954 aa10.76□□□□□ -0.69
NUP50-217ENST00000491860 NFIAQ12857 509 aa10.76□□□□□ -0.69
NUP50-217ENST00000491860 OS9Q13438 667 aaPredicted RBP10.76□□□□□ -0.69
NUP50-217ENST00000491860 DIEXFQ68CQ4 756 aaKnown RBP10.76□□□□□ -0.69
NUP50-217ENST00000491860 TMED8Q6PL24 325 aaPredicted RBP10.76□□□□□ -0.69
NUP50-217ENST00000491860 FASTKD5Q7L8L6 764 aaKnown RBP10.76□□□□□ -0.69
NUP50-217ENST00000491860 SCYL3Q8IZE3 742 aa10.76□□□□□ -0.69
NUP50-217ENST00000491860 CNKSR2Q8WXI2 1034 aa10.76□□□□□ -0.69
NUP50-217ENST00000491860 CLUAP1Q96AJ1 413 aa10.76□□□□□ -0.69
NUP50-217ENST00000491860 PARK7Q99497 189 aaKnown RBP10.76□□□□□ -0.69
NUP50-217ENST00000491860 TMEM106CQ9BVX2 250 aa10.76□□□□□ -0.69
NUP50-217ENST00000491860 COLQQ9Y215 455 aaPredicted RBP10.76□□□□□ -0.69
NUP50-217ENST00000491860 CTNND1O60716 968 aaKnown RBP10.75□□□□□ -0.69
NUP50-217ENST00000491860 BAG3O95817 575 aa10.75□□□□□ -0.69
NUP50-217ENST00000491860 PLCG2P16885 1265 aa10.75□□□□□ -0.69
NUP50-217ENST00000491860 INPP5BP32019 993 aa10.75□□□□□ -0.69
NUP50-217ENST00000491860 BTDP43251 543 aa10.75□□□□□ -0.69
NUP50-217ENST00000491860 ATP8B2P98198 1209 aa10.75□□□□□ -0.69
NUP50-217ENST00000491860 MECOMQ03112 1051 aa10.75□□□□□ -0.69
NUP50-217ENST00000491860 POLA2Q14181 598 aa10.75□□□□□ -0.69
NUP50-217ENST00000491860 CERS3Q8IU89 383 aa10.75□□□□□ -0.69
NUP50-217ENST00000491860 TMEM57Q8N5G2 664 aa10.75□□□□□ -0.69
NUP50-217ENST00000491860 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.75□□□□□ -0.69
NUP50-217ENST00000491860 SSH3Q8TE77 659 aa10.75□□□□□ -0.69
NUP50-217ENST00000491860 ZNF512BQ96KM6 892 aaPredicted RBP10.75□□□□□ -0.69
NUP50-217ENST00000491860 HMG20BQ9P0W2 317 aa10.75□□□□□ -0.69
NUP50-217ENST00000491860 LRP2BPQ9P2M1 347 aa10.75□□□□□ -0.69
NUP50-217ENST00000491860 SLC45A1Q9Y2W3 748 aa10.75□□□□□ -0.69
NUP50-217ENST00000491860 ZBED9Q6R2W3 1325 aa10.75□□□□□ -0.69
NUP50-217ENST00000491860 RFX7Q2KHR2 1363 aa10.75□□□□□ -0.69
NUP50-217ENST00000491860 ATRNL1Q5VV63 1379 aa10.75□□□□□ -0.69
NUP50-217ENST00000491860 PNMA6EA0A0J9YXQ4 647 aa10.74□□□□□ -0.69
NUP50-217ENST00000491860 PDHXO00330 501 aa10.74□□□□□ -0.69
NUP50-217ENST00000491860 LACTBP83111 547 aaPredicted RBP10.74□□□□□ -0.69
NUP50-217ENST00000491860 CAP1Q01518 475 aa10.74□□□□□ -0.69
NUP50-217ENST00000491860 SLC9C1Q4G0N8 1177 aa10.74□□□□□ -0.69
NUP50-217ENST00000491860 TTC39AQ5SRH9 613 aa10.74□□□□□ -0.69
NUP50-217ENST00000491860 ERC1Q8IUD2 1116 aa10.74□□□□□ -0.69
NUP50-217ENST00000491860 ITPRIPQ8IWB1 547 aa10.74□□□□□ -0.69
NUP50-217ENST00000491860 NSUN4Q96CB9 384 aaKnown RBP10.74□□□□□ -0.69
NUP50-217ENST00000491860 DHX36Q9H2U1 1008 aaKnown RBP10.74□□□□□ -0.69
NUP50-217ENST00000491860 CHMP4BQ9H444 224 aaKnown RBP10.74□□□□□ -0.69
NUP50-217ENST00000491860 RAI14Q9P0K7 980 aa10.74□□□□□ -0.69
NUP50-217ENST00000491860 MAST2Q6P0Q8 1798 aa10.73□□□□□ -0.69
NUP50-217ENST00000491860 DOCK1Q14185 1865 aa10.73□□□□□ -0.69
NUP50-217ENST00000491860 PHF20L1A8MW92 1017 aa10.73□□□□□ -0.69
NUP50-217ENST00000491860 SURF6O75683 361 aaKnown RBP10.73□□□□□ -0.69
NUP50-217ENST00000491860 CAPN2P17655 700 aa10.73□□□□□ -0.69
NUP50-217ENST00000491860 PTPRAP18433 802 aa10.73□□□□□ -0.69
NUP50-217ENST00000491860 HSP90AB4PQ58FF6 505 aa10.73□□□□□ -0.69
NUP50-217ENST00000491860 TNNI3KQ59H18 835 aa10.73□□□□□ -0.69
NUP50-217ENST00000491860 C17orf99Q6UX52 265 aa10.73□□□□□ -0.69
NUP50-217ENST00000491860 OSBPL5Q9H0X9 879 aaPredicted RBP10.73□□□□□ -0.69
NUP50-217ENST00000491860 HERC5Q9UII4 1024 aaKnown RBP10.73□□□□□ -0.69
NUP50-217ENST00000491860 NOP58Q9Y2X3 529 aaKnown RBP10.73□□□□□ -0.69
NUP50-217ENST00000491860 FPGT-TNNI3KV9GXZ4 949 aa10.73□□□□□ -0.69
NUP50-217ENST00000491860 SZT2Q5T011 3432 aa10.72□□□□□ -0.69
NUP50-217ENST00000491860 A0A0G2JLL6 359 aaPredicted RBP10.72□□□□□ -0.69
NUP50-217ENST00000491860 DDTLA6NHG4 134 aaPredicted RBP10.72□□□□□ -0.69
NUP50-217ENST00000491860 MCAMP43121 646 aa10.72□□□□□ -0.69
NUP50-217ENST00000491860 RHBDL3P58872 404 aa10.72□□□□□ -0.69
NUP50-217ENST00000491860 PICALMQ13492 652 aa10.72□□□□□ -0.69
NUP50-217ENST00000491860 PRRT2Q7Z6L0 340 aaPredicted RBP10.72□□□□□ -0.69
NUP50-217ENST00000491860 TEX11Q8IYF3 940 aa10.72□□□□□ -0.69
NUP50-217ENST00000491860 MIER1Q8N108 512 aa10.72□□□□□ -0.69
NUP50-217ENST00000491860 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.72□□□□□ -0.69
NUP50-217ENST00000491860 GINM1Q9NU53 330 aa10.72□□□□□ -0.69
NUP50-217ENST00000491860 PNMA3Q9UL41 463 aa10.72□□□□□ -0.69
NUP50-217ENST00000491860 PTCH2Q9Y6C5 1203 aa10.72□□□□□ -0.69
NUP50-217ENST00000491860 ZHX2Q9Y6X8 837 aa10.72□□□□□ -0.69
NUP50-217ENST00000491860 H0YGN5 161 aa10.71□□□□□ -0.69
NUP50-217ENST00000491860 ZBTB7BO15156 539 aaPredicted RBP10.71□□□□□ -0.69
NUP50-217ENST00000491860 PABPC4Q13310 644 aaKnown RBP eCLIP10.71□□□□□ -0.69
NUP50-217ENST00000491860 NAA16Q6N069 864 aaPredicted RBP10.71□□□□□ -0.69
NUP50-217ENST00000491860 ZFPM1Q8IX07 1006 aa10.71□□□□□ -0.69
NUP50-217ENST00000491860 AS3MTQ9HBK9 375 aa10.71□□□□□ -0.69
NUP50-217ENST00000491860 PI4KBQ9UBF8 816 aa10.71□□□□□ -0.69
NUP50-217ENST00000491860 AFG3L2Q9Y4W6 797 aa10.71□□□□□ -0.69
NUP50-217ENST00000491860 PTPRFP10586 1907 aa10.7□□□□□ -0.7
NUP50-217ENST00000491860 PSMC4P43686 418 aa10.7□□□□□ -0.7
NUP50-217ENST00000491860 FCGRTP55899 365 aa10.7□□□□□ -0.7
NUP50-217ENST00000491860 PPP4CP60510 307 aa10.7□□□□□ -0.7
NUP50-217ENST00000491860 MOGSQ13724 837 aa10.7□□□□□ -0.7
NUP50-217ENST00000491860 SLC4A8Q2Y0W8 1093 aa10.7□□□□□ -0.7
NUP50-217ENST00000491860 SH3BP5LQ7L8J4 393 aa10.7□□□□□ -0.7
NUP50-217ENST00000491860 PROCA1Q8NCQ7 364 aaPredicted RBP10.7□□□□□ -0.7
NUP50-217ENST00000491860 NKX2-3Q8TAU0 364 aa10.7□□□□□ -0.7
NUP50-217ENST00000491860 RAET1EQ8TD07 263 aa10.7□□□□□ -0.7
NUP50-217ENST00000491860 TRIM47Q96LD4 638 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms