RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 PTCH2Q9Y6C5 1203 aa11.03□□□□□ -0.64
HDAC3-211ENST00000491581 MGAMO43451 1857 aa11.03□□□□□ -0.64
HDAC3-211ENST00000491581 GAKO14976 1311 aa11.03□□□□□ -0.64
HDAC3-211ENST00000491581 RBBP6Q7Z6E9 1792 aaKnown RBP11.03□□□□□ -0.64
HDAC3-211ENST00000491581 RPAP1Q9BWH6 1393 aaPredicted RBP11.03□□□□□ -0.64
HDAC3-211ENST00000491581 FOCADQ5VW36 1801 aa11.02□□□□□ -0.64
HDAC3-211ENST00000491581 PHF20L1A8MW92 1017 aa11.02□□□□□ -0.65
HDAC3-211ENST00000491581 ALDH1A1P00352 501 aa11.02□□□□□ -0.65
HDAC3-211ENST00000491581 GTF2A2P52657 109 aa11.02□□□□□ -0.65
HDAC3-211ENST00000491581 RHBDL3P58872 404 aa11.02□□□□□ -0.65
HDAC3-211ENST00000491581 NOM1Q5C9Z4 860 aaKnown RBP11.02□□□□□ -0.65
HDAC3-211ENST00000491581 ERO1BQ86YB8 467 aa11.02□□□□□ -0.65
HDAC3-211ENST00000491581 ITPRIPQ8IWB1 547 aa11.02□□□□□ -0.65
HDAC3-211ENST00000491581 SPATA5Q8NB90 893 aa11.02□□□□□ -0.65
HDAC3-211ENST00000491581 GNL3LQ9NVN8 582 aaKnown RBP11.02□□□□□ -0.65
HDAC3-211ENST00000491581 ZNF112Q9UJU3 913 aa11.02□□□□□ -0.65
HDAC3-211ENST00000491581 FBXO3Q9UK99 471 aa11.02□□□□□ -0.65
HDAC3-211ENST00000491581 MROH7-TTC4A0A0A0MT08 1334 aa11.02□□□□□ -0.65
HDAC3-211ENST00000491581 ZBTB7BO15156 539 aaPredicted RBP11.01□□□□□ -0.65
HDAC3-211ENST00000491581 CYP2C8P10632 490 aa11.01□□□□□ -0.65
HDAC3-211ENST00000491581 EN2P19622 333 aaPredicted RBP11.01□□□□□ -0.65
HDAC3-211ENST00000491581 JAG1P78504 1218 aa11.01□□□□□ -0.65
HDAC3-211ENST00000491581 PPIL2Q13356 520 aa11.01□□□□□ -0.65
HDAC3-211ENST00000491581 POLA2Q14181 598 aa11.01□□□□□ -0.65
HDAC3-211ENST00000491581 FKBP1CQ5VVH2 108 aa11.01□□□□□ -0.65
HDAC3-211ENST00000491581 ZSCAN29Q8IWY8 852 aaPredicted RBP11.01□□□□□ -0.65
HDAC3-211ENST00000491581 SH3RF3Q8TEJ3 882 aaPredicted RBP11.01□□□□□ -0.65
HDAC3-211ENST00000491581 SH3TC2Q8TF17 1288 aa11.01□□□□□ -0.65
HDAC3-211ENST00000491581 NSUN4Q96CB9 384 aaKnown RBP11.01□□□□□ -0.65
HDAC3-211ENST00000491581 CCDC8Q9H0W5 538 aaPredicted RBP11.01□□□□□ -0.65
HDAC3-211ENST00000491581 EFCC1Q9HA90 598 aa11.01□□□□□ -0.65
HDAC3-211ENST00000491581 UNCXA6NJT0 531 aa11□□□□□ -0.65
HDAC3-211ENST00000491581 SEMA3EO15041 775 aa11□□□□□ -0.65
HDAC3-211ENST00000491581 IPO8O15397 1037 aaKnown RBP11□□□□□ -0.65
HDAC3-211ENST00000491581 PEX10O60683 326 aa11□□□□□ -0.65
HDAC3-211ENST00000491581 SURF6O75683 361 aaKnown RBP11□□□□□ -0.65
HDAC3-211ENST00000491581 ARID4AP29374 1257 aaPredicted RBP11□□□□□ -0.65
HDAC3-211ENST00000491581 ATP8B2P98198 1209 aa11□□□□□ -0.65
HDAC3-211ENST00000491581 G3BP1Q13283 466 aaKnown RBP eCLIP11□□□□□ -0.65
HDAC3-211ENST00000491581 MVPQ14764 893 aaKnown RBP11□□□□□ -0.65
HDAC3-211ENST00000491581 PKN2Q16513 984 aaKnown RBP11□□□□□ -0.65
HDAC3-211ENST00000491581 TNNI3KQ59H18 835 aa11□□□□□ -0.65
HDAC3-211ENST00000491581 GORABQ5T7V8 394 aa11□□□□□ -0.65
HDAC3-211ENST00000491581 DCAF15Q66K64 600 aa11□□□□□ -0.65
HDAC3-211ENST00000491581 GPAT2Q6NUI2 795 aa11□□□□□ -0.65
HDAC3-211ENST00000491581 ERICH6Q7L0X2 663 aa11□□□□□ -0.65
HDAC3-211ENST00000491581 SSH3Q8TE77 659 aa11□□□□□ -0.65
HDAC3-211ENST00000491581 ERO1AQ96HE7 468 aa11□□□□□ -0.65
HDAC3-211ENST00000491581 PIH1D3Q9NQM4 214 aaKnown RBP11□□□□□ -0.65
HDAC3-211ENST00000491581 RAI14Q9P0K7 980 aa11□□□□□ -0.65
HDAC3-211ENST00000491581 EXOC6BQ9Y2D4 811 aa11□□□□□ -0.65
HDAC3-211ENST00000491581 FPGT-TNNI3KV9GXZ4 949 aa11□□□□□ -0.65
HDAC3-211ENST00000491581 GPR75-ASB3A0A0A6YYF3 556 aa10.99□□□□□ -0.65
HDAC3-211ENST00000491581 APBB1O00213 710 aa10.99□□□□□ -0.65
HDAC3-211ENST00000491581 PDHXO00330 501 aa10.99□□□□□ -0.65
HDAC3-211ENST00000491581 CYP2E1P05181 493 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-211ENST00000491581 CETPP11597 493 aa10.99□□□□□ -0.65
HDAC3-211ENST00000491581 ZAP70P43403 619 aa10.99□□□□□ -0.65
HDAC3-211ENST00000491581 DYNLL1P63167 89 aaKnown RBP10.99□□□□□ -0.65
HDAC3-211ENST00000491581 EVX2Q03828 476 aa10.99□□□□□ -0.65
HDAC3-211ENST00000491581 SNAPC2Q13487 334 aa10.99□□□□□ -0.65
HDAC3-211ENST00000491581 OTUD7BQ6GQQ9 843 aa10.99□□□□□ -0.65
HDAC3-211ENST00000491581 EAF2Q96CJ1 260 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-211ENST00000491581 IDI2Q9BXS1 227 aa10.99□□□□□ -0.65
HDAC3-211ENST00000491581 ANTXR1Q9H6X2 564 aa10.99□□□□□ -0.65
HDAC3-211ENST00000491581 ZFYVE28Q9HCC9 887 aa10.99□□□□□ -0.65
HDAC3-211ENST00000491581 AATFQ9NY61 560 aaKnown RBP eCLIP10.99□□□□□ -0.65
HDAC3-211ENST00000491581 DBNLQ9UJU6 430 aaKnown RBP10.99□□□□□ -0.65
HDAC3-211ENST00000491581 AKAP2Q9Y2D5 859 aa10.99□□□□□ -0.65
HDAC3-211ENST00000491581 ZHX2Q9Y6X8 837 aa10.99□□□□□ -0.65
HDAC3-211ENST00000491581 ADGRA2Q96PE1 1338 aa10.99□□□□□ -0.65
HDAC3-211ENST00000491581 TRIM75PA6NK02 468 aa10.98□□□□□ -0.65
HDAC3-211ENST00000491581 TLR2O60603 784 aa10.98□□□□□ -0.65
HDAC3-211ENST00000491581 PTPRAP18433 802 aa10.98□□□□□ -0.65
HDAC3-211ENST00000491581 LACTBP83111 547 aaPredicted RBP10.98□□□□□ -0.65
HDAC3-211ENST00000491581 PPATQ06203 517 aa10.98□□□□□ -0.65
HDAC3-211ENST00000491581 OS9Q13438 667 aaPredicted RBP10.98□□□□□ -0.65
HDAC3-211ENST00000491581 SLFNL1Q499Z3 407 aa10.98□□□□□ -0.65
HDAC3-211ENST00000491581 GADL1Q6ZQY3 521 aa10.98□□□□□ -0.65
HDAC3-211ENST00000491581 FTSJ3Q8IY81 847 aaKnown RBP10.98□□□□□ -0.65
HDAC3-211ENST00000491581 TRIM47Q96LD4 638 aa10.98□□□□□ -0.65
HDAC3-211ENST00000491581 KCNH4Q9UQ05 1017 aa10.98□□□□□ -0.65
HDAC3-211ENST00000491581 MKI67P46013 3256 aaKnown RBP10.98□□□□□ -0.65
HDAC3-211ENST00000491581 LOC285556D6RIA3 1793 aa10.98□□□□□ -0.65
HDAC3-211ENST00000491581 MYH1P12882 1939 aa10.97□□□□□ -0.65
HDAC3-211ENST00000491581 ENTPD3O75355 529 aa10.97□□□□□ -0.65
HDAC3-211ENST00000491581 CHGBP05060 677 aa10.97□□□□□ -0.65
HDAC3-211ENST00000491581 MTFR1Q15390 333 aa10.97□□□□□ -0.65
HDAC3-211ENST00000491581 TTC39AQ5SRH9 613 aa10.97□□□□□ -0.65
HDAC3-211ENST00000491581 NOL9Q5SY16 702 aaKnown RBP10.97□□□□□ -0.65
HDAC3-211ENST00000491581 TREML2Q5T2D2 321 aa10.97□□□□□ -0.65
HDAC3-211ENST00000491581 C20orf194Q5TEA3 1177 aa10.97□□□□□ -0.65
HDAC3-211ENST00000491581 CEP85Q6P2H3 762 aa10.97□□□□□ -0.65
HDAC3-211ENST00000491581 C17orf99Q6UX52 265 aa10.97□□□□□ -0.65
HDAC3-211ENST00000491581 MAPKAPK5Q8IW41 473 aa10.97□□□□□ -0.65
HDAC3-211ENST00000491581 SCYL3Q8IZE3 742 aa10.97□□□□□ -0.65
HDAC3-211ENST00000491581 FAM163AQ96GL9 167 aaPredicted RBP10.97□□□□□ -0.65
HDAC3-211ENST00000491581 IL1RAPL2Q9NP60 686 aa10.97□□□□□ -0.65
HDAC3-211ENST00000491581 LRP2BPQ9P2M1 347 aa10.97□□□□□ -0.65
HDAC3-211ENST00000491581 SAP30BPQ9UHR5 308 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms