RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 CEP350Q5VT06 3117 aa19.72■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 ZNF532Q9HCE3 1301 aa19.72■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 TCRBV5S4A2TA0A5A2 114 aa19.71■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 CENPBP07199 599 aaPredicted RBP19.71■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 ADD2P35612 726 aa19.71■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 DCAF15Q66K64 600 aa19.71■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 RASAL3Q86YV0 1011 aa19.71■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 ZSCAN29Q8IWY8 852 aaPredicted RBP19.71■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 OSBPL5Q9H0X9 879 aaPredicted RBP19.71■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 STAP2Q9UGK3 403 aa19.71■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 COL2A1P02458 1487 aaPredicted RBP19.71■□□□□ 0.75
MSH5-SAPCD1-206ENST00000491552 MYH7P12883 1935 aa19.7■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 OTOFQ9HC10 1997 aa19.7■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 FOCADQ5VW36 1801 aa19.7■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 UNCXA6NJT0 531 aa19.7■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 FAM155AB1AL88 458 aaPredicted RBP19.7■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 AOC2O75106 756 aa19.7■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 PDE1AP54750 535 aa19.7■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 NOGQ13253 232 aa19.7■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 ZSCAN25Q6NSZ9 544 aa19.7■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 SH3BP5LQ7L8J4 393 aa19.7■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 KBTBD3Q8NAB2 608 aa19.7■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 CSRNP1Q96S65 589 aa19.7■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 ATRNL1Q5VV63 1379 aa19.7■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 CDK5RAP2Q96SN8 1893 aa19.69■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 MAGEB6P1A0A0J9YX57 407 aa19.69■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 ANKRD13AQ8IZ07 590 aa19.69■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 TGFBRAP1Q8WUH2 860 aa19.69■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 FLT1P17948 1338 aa19.69■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 AK9Q5TCS8 1911 aa19.68■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 DDTLA6NHG4 134 aaPredicted RBP19.68■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 MAP2K2P36507 400 aa19.68■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 UBE3CQ15386 1083 aa19.68■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 MIGA2Q7L4E1 593 aa19.68■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.68■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 RIOK1Q9BRS2 568 aaKnown RBP19.68■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 ZNF341Q9BYN7 854 aa19.68■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 SLFNL1Q499Z3 407 aa19.67■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 MAPKAPK5Q8IW41 473 aa19.67■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 SLC10A4Q96EP9 437 aa19.67■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 CLMNQ96JQ2 1002 aa19.67■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 WRNIP1Q96S55 665 aa19.67■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 CHGBP05060 677 aa19.66■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 USP5P45974 858 aa19.66■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 MAP3K9P80192 1104 aa19.66■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.66■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.66■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 CSADQ9Y600 493 aa19.66■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 NEFLP07196 543 aa19.65■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 ZFYP08048 801 aaPredicted RBP19.65■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 MAP2K1Q02750 393 aaPredicted RBP19.65■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 VGLL4Q14135 290 aa19.65■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 LRRFIP1Q32MZ4 808 aaKnown RBP19.65■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 PLEKHM2Q8IWE5 1019 aa19.65■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 LCORLQ8N3X6 602 aa19.65■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 FSD1Q9BTV5 496 aa19.65■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 CRNKL1Q9BZJ0 848 aaKnown RBP19.65■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 DHX36Q9H2U1 1008 aaKnown RBP19.65■□□□□ 0.74
MSH5-SAPCD1-206ENST00000491552 RNF113AO15541 343 aaKnown RBP19.64■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 MBD4O95243 580 aa19.64■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 ZIC5Q96T25 663 aa19.64■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 ELP3Q9H9T3 547 aa19.64■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 ZNF112Q9UJU3 913 aa19.64■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 HSPA1AP0DMV8 641 aaKnown RBP19.63■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 HSPA1BP0DMV9 641 aaKnown RBP19.63■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 KIF23Q02241 960 aaPredicted RBP19.63■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 MAP3K10Q02779 954 aa19.63■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 MKRN3Q13064 507 aaKnown RBP19.63■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 SPRYD7Q5W111 196 aa19.63■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 APPBP2Q92624 585 aa19.63■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 WNK4Q96J92 1243 aa19.63■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 OSBPL3Q9H4L5 887 aa19.63■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 ARMT1Q9H993 441 aa19.63■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 SAP30BPQ9UHR5 308 aaKnown RBP19.63■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 NAV1Q8NEY1 1877 aa19.62■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 DDX60LQ5H9U9 1706 aaKnown RBP19.62■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 TBC1D12O60347 775 aa19.62■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 HLA-DOAP06340 250 aa19.62■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 ZBTB48P10074 688 aaPredicted RBP19.62■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 INPP5BP32019 993 aa19.62■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 ZKSCAN4Q969J2 545 aaPredicted RBP19.62■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 AIDAQ96BJ3 306 aa19.62■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 EVI5LQ96CN4 794 aa19.62■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 PUS7LQ9H0K6 701 aaKnown RBP19.62■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.62■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 WBP1LQ9NX94 342 aa19.62■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 PI4KBQ9UBF8 816 aa19.62■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 PALD1Q9ULE6 856 aa19.62■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 SNCAIPQ9Y6H5 919 aa19.62■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 SIPA1L1O43166 1804 aa19.62■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 SLURP2P0DP57 97 aa19.61■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 REM2Q8IYK8 340 aaPredicted RBP19.61■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 OPTNQ96CV9 577 aa19.61■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 MYH1P12882 1939 aa19.61■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 PHF20L1A8MW92 1017 aa19.6■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 PDE4AP27815 886 aa19.6■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 GJA5P36382 358 aa19.6■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 NOL9Q5SY16 702 aaKnown RBP19.6■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 SDR42E1Q8WUS8 393 aa19.6■□□□□ 0.73
MSH5-SAPCD1-206ENST00000491552 OSBP2Q969R2 916 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms