RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 PRKCZQ05513 592 aa14.04□□□□□ -0.16
CLCNKA-206ENST00000491433 FASTKD5Q7L8L6 764 aaKnown RBP14.04□□□□□ -0.16
CLCNKA-206ENST00000491433 PXYLP1Q8TE99 480 aa14.04□□□□□ -0.16
CLCNKA-206ENST00000491433 FAM151AQ8WW52 585 aa14.04□□□□□ -0.16
CLCNKA-206ENST00000491433 ZNF112Q9UJU3 913 aa14.04□□□□□ -0.16
CLCNKA-206ENST00000491433 ADCY3O60266 1144 aa14.03□□□□□ -0.16
CLCNKA-206ENST00000491433 BCRP11274 1271 aa14.03□□□□□ -0.16
CLCNKA-206ENST00000491433 NOL9Q5SY16 702 aaKnown RBP14.03□□□□□ -0.16
CLCNKA-206ENST00000491433 ATXN2LQ8WWM7 1075 aaKnown RBP14.03□□□□□ -0.16
CLCNKA-206ENST00000491433 DEFB118Q96PH6 123 aa14.03□□□□□ -0.16
CLCNKA-206ENST00000491433 KIF16BQ96L93 1317 aa14.02□□□□□ -0.17
CLCNKA-206ENST00000491433 INPP5BP32019 993 aa14.02□□□□□ -0.17
CLCNKA-206ENST00000491433 IRF5Q13568 498 aa14.02□□□□□ -0.17
CLCNKA-206ENST00000491433 EPHA10Q5JZY3 1008 aa14.02□□□□□ -0.17
CLCNKA-206ENST00000491433 APOBEC3HQ6NTF7 200 aaKnown RBP14.02□□□□□ -0.17
CLCNKA-206ENST00000491433 MIGA2Q7L4E1 593 aa14.02□□□□□ -0.17
CLCNKA-206ENST00000491433 IL27Q8NEV9 243 aa14.02□□□□□ -0.17
CLCNKA-206ENST00000491433 SLC45A1Q9Y2W3 748 aa14.02□□□□□ -0.17
CLCNKA-206ENST00000491433 MYH13Q9UKX3 1938 aa14.02□□□□□ -0.17
CLCNKA-206ENST00000491433 F6X3S4 739 aa14.01□□□□□ -0.17
CLCNKA-206ENST00000491433 VAMP4O75379 141 aa14.01□□□□□ -0.17
CLCNKA-206ENST00000491433 MRE11P49959 708 aa14.01□□□□□ -0.17
CLCNKA-206ENST00000491433 METTL24Q5JXM2 366 aa14.01□□□□□ -0.17
CLCNKA-206ENST00000491433 WDR66Q8TBY9 1149 aa14.01□□□□□ -0.17
CLCNKA-206ENST00000491433 DIS3LQ8TF46 1054 aaKnown RBP14.01□□□□□ -0.17
CLCNKA-206ENST00000491433 LRFN3Q9BTN0 628 aa14.01□□□□□ -0.17
CLCNKA-206ENST00000491433 IQSEC3Q9UPP2 1182 aaPredicted RBP14.01□□□□□ -0.17
CLCNKA-206ENST00000491433 ALPK3Q96L96 1907 aa14□□□□□ -0.17
CLCNKA-206ENST00000491433 FANCIQ9NVI1 1328 aa14□□□□□ -0.17
CLCNKA-206ENST00000491433 PDE8BO95263 885 aa14□□□□□ -0.17
CLCNKA-206ENST00000491433 IFIT1P09914 478 aaKnown RBP14□□□□□ -0.17
CLCNKA-206ENST00000491433 GRIK5Q16478 980 aa14□□□□□ -0.17
CLCNKA-206ENST00000491433 ANKLE1Q8NAG6 615 aa14□□□□□ -0.17
CLCNKA-206ENST00000491433 COA7Q96BR5 231 aa14□□□□□ -0.17
CLCNKA-206ENST00000491433 ASB2Q96Q27 587 aa14□□□□□ -0.17
CLCNKA-206ENST00000491433 PUS3Q9BZE2 481 aaKnown RBP14□□□□□ -0.17
CLCNKA-206ENST00000491433 SRCIN1Q9C0H9 1055 aa14□□□□□ -0.17
CLCNKA-206ENST00000491433 CRISPLD2Q9H0B8 497 aa14□□□□□ -0.17
CLCNKA-206ENST00000491433 TNPO2O14787 897 aaKnown RBP13.99□□□□□ -0.17
CLCNKA-206ENST00000491433 INHAP05111 366 aa13.99□□□□□ -0.17
CLCNKA-206ENST00000491433 FLT3LGP49771 235 aa13.99□□□□□ -0.17
CLCNKA-206ENST00000491433 MOGSQ13724 837 aa13.99□□□□□ -0.17
CLCNKA-206ENST00000491433 NBPF3Q9H094 633 aa13.99□□□□□ -0.17
CLCNKA-206ENST00000491433 PICK1Q9NRD5 415 aa13.99□□□□□ -0.17
CLCNKA-206ENST00000491433 GABRQQ9UN88 632 aa13.99□□□□□ -0.17
CLCNKA-206ENST00000491433 CDH23Q9H251 3354 aa13.98□□□□□ -0.17
CLCNKA-206ENST00000491433 CYP2C8P10632 490 aa13.98□□□□□ -0.17
CLCNKA-206ENST00000491433 MDM2Q00987 491 aaPredicted RBP13.98□□□□□ -0.17
CLCNKA-206ENST00000491433 GPAT2Q6NUI2 795 aa13.98□□□□□ -0.17
CLCNKA-206ENST00000491433 WDR63Q8IWG1 891 aa13.98□□□□□ -0.17
CLCNKA-206ENST00000491433 USP38Q8NB14 1042 aa13.98□□□□□ -0.17
CLCNKA-206ENST00000491433 SMCR8Q8TEV9 937 aaPredicted RBP13.98□□□□□ -0.17
CLCNKA-206ENST00000491433 PAK6Q9NQU5 681 aaPredicted RBP13.98□□□□□ -0.17
CLCNKA-206ENST00000491433 A0A0G2JLL6 359 aaPredicted RBP13.97□□□□□ -0.17
CLCNKA-206ENST00000491433 TCP10Q12799 353 aa13.97□□□□□ -0.17
CLCNKA-206ENST00000491433 PUM3Q15397 648 aaKnown RBP13.97□□□□□ -0.17
CLCNKA-206ENST00000491433 SLC4A10Q6U841 1118 aa13.97□□□□□ -0.17
CLCNKA-206ENST00000491433 PRRT2Q7Z6L0 340 aaPredicted RBP13.97□□□□□ -0.17
CLCNKA-206ENST00000491433 SCYL3Q8IZE3 742 aa13.97□□□□□ -0.17
CLCNKA-206ENST00000491433 SUCLG2Q96I99 432 aa13.97□□□□□ -0.17
CLCNKA-206ENST00000491433 UTYO14607 1347 aa13.96□□□□□ -0.17
CLCNKA-206ENST00000491433 SLC5A1P13866 664 aa13.96□□□□□ -0.17
CLCNKA-206ENST00000491433 ELNP15502 786 aa13.96□□□□□ -0.17
CLCNKA-206ENST00000491433 EXOSC9Q06265 439 aaKnown RBP13.96□□□□□ -0.17
CLCNKA-206ENST00000491433 RABL6Q3YEC7 729 aaPredicted RBP13.96□□□□□ -0.17
CLCNKA-206ENST00000491433 TMEM31Q5JXX7 168 aa13.96□□□□□ -0.17
CLCNKA-206ENST00000491433 DIEXFQ68CQ4 756 aaKnown RBP13.96□□□□□ -0.17
CLCNKA-206ENST00000491433 GADL1Q6ZQY3 521 aa13.96□□□□□ -0.17
CLCNKA-206ENST00000491433 VGLL2Q8N8G2 317 aa13.96□□□□□ -0.17
CLCNKA-206ENST00000491433 TTYH1Q9H313 450 aaPredicted RBP13.96□□□□□ -0.17
CLCNKA-206ENST00000491433 C11orf49Q9H6J7 331 aa13.96□□□□□ -0.17
CLCNKA-206ENST00000491433 THEGQ9P2T0 379 aa13.96□□□□□ -0.17
CLCNKA-206ENST00000491433 PNMA3Q9UL41 463 aa13.96□□□□□ -0.17
CLCNKA-206ENST00000491433 ZHX2Q9Y6X8 837 aa13.96□□□□□ -0.17
CLCNKA-206ENST00000491433 DOCK2Q92608 1830 aa13.96□□□□□ -0.17
CLCNKA-206ENST00000491433 MRPS5P82675 430 aaKnown RBP13.95□□□□□ -0.18
CLCNKA-206ENST00000491433 LRRC24Q50LG9 513 aa13.95□□□□□ -0.18
CLCNKA-206ENST00000491433 CDC42EP5Q6NZY7 148 aa13.95□□□□□ -0.18
CLCNKA-206ENST00000491433 LBHD1Q9BQE6 289 aaPredicted RBP13.95□□□□□ -0.18
CLCNKA-206ENST00000491433 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.95□□□□□ -0.18
CLCNKA-206ENST00000491433 GNL3LQ9NVN8 582 aaKnown RBP13.95□□□□□ -0.18
CLCNKA-206ENST00000491433 DAGLAQ9Y4D2 1042 aa13.95□□□□□ -0.18
CLCNKA-206ENST00000491433 LRRFIP2Q9Y608 721 aaKnown RBP13.95□□□□□ -0.18
CLCNKA-206ENST00000491433 PTPRFP10586 1907 aa13.94□□□□□ -0.18
CLCNKA-206ENST00000491433 ENTPD3O75355 529 aa13.94□□□□□ -0.18
CLCNKA-206ENST00000491433 LDHBP07195 334 aaKnown RBP13.94□□□□□ -0.18
CLCNKA-206ENST00000491433 PTPRAP18433 802 aa13.94□□□□□ -0.18
CLCNKA-206ENST00000491433 FAM110CQ1W6H9 321 aa13.94□□□□□ -0.18
CLCNKA-206ENST00000491433 LPIN2Q92539 896 aa13.94□□□□□ -0.18
CLCNKA-206ENST00000491433 BICC1Q9H694 974 aaKnown RBP13.94□□□□□ -0.18
CLCNKA-206ENST00000491433 USP40Q9NVE5 1235 aa13.94□□□□□ -0.18
CLCNKA-206ENST00000491433 TAOK2Q9UL54 1235 aa13.94□□□□□ -0.18
CLCNKA-206ENST00000491433 AFG3L2Q9Y4W6 797 aa13.94□□□□□ -0.18
CLCNKA-206ENST00000491433 DOCK1Q14185 1865 aa13.93□□□□□ -0.18
CLCNKA-206ENST00000491433 CTNND1O60716 968 aaKnown RBP13.93□□□□□ -0.18
CLCNKA-206ENST00000491433 HMGCRP04035 888 aa13.93□□□□□ -0.18
CLCNKA-206ENST00000491433 NBPF7P0C2Y1 421 aaPredicted RBP13.93□□□□□ -0.18
CLCNKA-206ENST00000491433 FGFR2P21802 821 aa13.93□□□□□ -0.18
CLCNKA-206ENST00000491433 FOXK2Q01167 660 aa13.93□□□□□ -0.18
CLCNKA-206ENST00000491433 PABPC4Q13310 644 aaKnown RBP eCLIP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms