RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 LARP1BQ659C4 914 aaKnown RBP11.84□□□□□ -0.51
HDAC9-225ENST00000490851 SPTY2D1Q68D10 685 aaPredicted RBP11.84□□□□□ -0.51
HDAC9-225ENST00000490851 DPP8Q6V1X1 898 aaPredicted RBP11.84□□□□□ -0.51
HDAC9-225ENST00000490851 MPNDQ8N594 471 aa11.84□□□□□ -0.51
HDAC9-225ENST00000490851 TMX4Q9H1E5 349 aaPredicted RBP11.84□□□□□ -0.51
HDAC9-225ENST00000490851 BAZ2AQ9UIF9 1905 aaKnown RBP11.84□□□□□ -0.51
HDAC9-225ENST00000490851 GOLGA8BA8MQT2 603 aa11.84□□□□□ -0.51
HDAC9-225ENST00000490851 H0YIN7 160 aa11.84□□□□□ -0.51
HDAC9-225ENST00000490851 PFKFB2O60825 505 aa11.84□□□□□ -0.51
HDAC9-225ENST00000490851 PDIA3P30101 505 aaKnown RBP11.84□□□□□ -0.51
HDAC9-225ENST00000490851 ALDH1B1P30837 517 aa11.84□□□□□ -0.51
HDAC9-225ENST00000490851 EVX2Q03828 476 aa11.84□□□□□ -0.51
HDAC9-225ENST00000490851 PPARAQ07869 468 aa11.84□□□□□ -0.51
HDAC9-225ENST00000490851 DOK7Q18PE1 504 aa11.84□□□□□ -0.51
HDAC9-225ENST00000490851 MFSD6Q6ZSS7 791 aa11.84□□□□□ -0.51
HDAC9-225ENST00000490851 FERMT3Q86UX7 667 aa11.84□□□□□ -0.51
HDAC9-225ENST00000490851 ZKSCAN3Q9BRR0 538 aa11.84□□□□□ -0.51
HDAC9-225ENST00000490851 GDPD2Q9HCC8 539 aa11.84□□□□□ -0.51
HDAC9-225ENST00000490851 VGLL3A8MV65 326 aa11.83□□□□□ -0.52
HDAC9-225ENST00000490851 PRPF40AO75400 957 aaKnown RBP11.83□□□□□ -0.52
HDAC9-225ENST00000490851 RXRAP19793 462 aa11.83□□□□□ -0.52
HDAC9-225ENST00000490851 AKNAD1Q5T1N1 836 aa11.83□□□□□ -0.52
HDAC9-225ENST00000490851 AGXT2Q9BYV1 514 aa11.83□□□□□ -0.52
HDAC9-225ENST00000490851 SENP2Q9HC62 589 aa11.83□□□□□ -0.52
HDAC9-225ENST00000490851 GTF2IP78347 998 aa11.82□□□□□ -0.52
HDAC9-225ENST00000490851 GSE1Q14687 1217 aa11.82□□□□□ -0.52
HDAC9-225ENST00000490851 PPP4R3BQ5MIZ7 849 aa11.82□□□□□ -0.52
HDAC9-225ENST00000490851 MFSD14BQ5SR56 506 aa11.82□□□□□ -0.52
HDAC9-225ENST00000490851 CLEC17AQ6ZS10 378 aa11.82□□□□□ -0.52
HDAC9-225ENST00000490851 C15orf52Q6ZUT6 534 aaKnown RBP11.82□□□□□ -0.52
HDAC9-225ENST00000490851 TMC4Q7Z404 712 aa11.82□□□□□ -0.52
HDAC9-225ENST00000490851 CCDC144CPQ8IYA2 1237 aa11.82□□□□□ -0.52
HDAC9-225ENST00000490851 MAP7D2Q96T17 732 aa11.82□□□□□ -0.52
HDAC9-225ENST00000490851 CRNKL1Q9BZJ0 848 aaKnown RBP11.82□□□□□ -0.52
HDAC9-225ENST00000490851 MTMR6Q9Y217 621 aa11.82□□□□□ -0.52
HDAC9-225ENST00000490851 ZMYM6O95789 1325 aa11.82□□□□□ -0.52
HDAC9-225ENST00000490851 CHD4Q14839 1912 aa11.82□□□□□ -0.52
HDAC9-225ENST00000490851 CCDC88AQ3V6T2 1871 aa11.82□□□□□ -0.52
HDAC9-225ENST00000490851 G3V3G9 751 aa11.82□□□□□ -0.52
HDAC9-225ENST00000490851 PRDM1O75626 825 aa11.82□□□□□ -0.52
HDAC9-225ENST00000490851 SLC20A2Q08357 652 aa11.82□□□□□ -0.52
HDAC9-225ENST00000490851 DCAF8Q5TAQ9 597 aa11.82□□□□□ -0.52
HDAC9-225ENST00000490851 NFXL1Q6ZNB6 911 aa11.82□□□□□ -0.52
HDAC9-225ENST00000490851 CDC37L1Q7L3B6 337 aa11.82□□□□□ -0.52
HDAC9-225ENST00000490851 ZC3H12CQ9C0D7 883 aaKnown RBP11.82□□□□□ -0.52
HDAC9-225ENST00000490851 ZSWIM5Q9P217 1185 aa11.82□□□□□ -0.52
HDAC9-225ENST00000490851 PTPDC1A2A3K4 754 aa11.81□□□□□ -0.52
HDAC9-225ENST00000490851 USP17L12C9JPN9 530 aa11.81□□□□□ -0.52
HDAC9-225ENST00000490851 USP17L21D6R901 530 aa11.81□□□□□ -0.52
HDAC9-225ENST00000490851 F8W031 263 aaPredicted RBP11.81□□□□□ -0.52
HDAC9-225ENST00000490851 F13A1P00488 732 aa11.81□□□□□ -0.52
HDAC9-225ENST00000490851 CYP2D6P10635 497 aa11.81□□□□□ -0.52
HDAC9-225ENST00000490851 IL1R1P14778 569 aa11.81□□□□□ -0.52
HDAC9-225ENST00000490851 TMEM67Q5HYA8 995 aa11.81□□□□□ -0.52
HDAC9-225ENST00000490851 NBPF11Q86T75 865 aa11.81□□□□□ -0.52
HDAC9-225ENST00000490851 EGFL6Q8IUX8 553 aa11.81□□□□□ -0.52
HDAC9-225ENST00000490851 FAM184AQ8NB25 1140 aa11.81□□□□□ -0.52
HDAC9-225ENST00000490851 SH3RF3Q8TEJ3 882 aaPredicted RBP11.81□□□□□ -0.52
HDAC9-225ENST00000490851 MYL10Q9BUA6 226 aa11.81□□□□□ -0.52
HDAC9-225ENST00000490851 ANGEL1Q9UNK9 670 aaKnown RBP11.81□□□□□ -0.52
HDAC9-225ENST00000490851 LRRC37AA6NMS7 1700 aa11.81□□□□□ -0.52
HDAC9-225ENST00000490851 IFIT3O14879 490 aaKnown RBP11.81□□□□□ -0.52
HDAC9-225ENST00000490851 CTDNEP1O95476 244 aa11.81□□□□□ -0.52
HDAC9-225ENST00000490851 TPM2P07951 284 aa11.81□□□□□ -0.52
HDAC9-225ENST00000490851 NSUN7Q8NE18 718 aaKnown RBP11.81□□□□□ -0.52
HDAC9-225ENST00000490851 MXD3Q9BW11 206 aa11.81□□□□□ -0.52
HDAC9-225ENST00000490851 DDX49Q9Y6V7 483 aaKnown RBP11.81□□□□□ -0.52
HDAC9-225ENST00000490851 SALL1Q9NSC2 1324 aa11.81□□□□□ -0.52
HDAC9-225ENST00000490851 SH2B2O14492 632 aaPredicted RBP11.8□□□□□ -0.52
HDAC9-225ENST00000490851 USP5P45974 858 aa11.8□□□□□ -0.52
HDAC9-225ENST00000490851 CTR9Q6PD62 1173 aa11.8□□□□□ -0.52
HDAC9-225ENST00000490851 MICU3Q86XE3 530 aa11.8□□□□□ -0.52
HDAC9-225ENST00000490851 STAG1Q8WVM7 1258 aa11.8□□□□□ -0.52
HDAC9-225ENST00000490851 ZNF274Q96GC6 653 aaPredicted RBP11.8□□□□□ -0.52
HDAC9-225ENST00000490851 KRT23Q9C075 422 aa11.8□□□□□ -0.52
HDAC9-225ENST00000490851 CNNM2Q9H8M5 875 aa11.8□□□□□ -0.52
HDAC9-225ENST00000490851 DCP1AQ9NPI6 582 aaPredicted RBP11.8□□□□□ -0.52
HDAC9-225ENST00000490851 LMBRD1Q9NUN5 540 aa11.8□□□□□ -0.52
HDAC9-225ENST00000490851 MAST2Q6P0Q8 1798 aa11.8□□□□□ -0.52
HDAC9-225ENST00000490851 TTC36A6NLP5 189 aa11.8□□□□□ -0.52
HDAC9-225ENST00000490851 PDCP20941 246 aa11.8□□□□□ -0.52
HDAC9-225ENST00000490851 LTBP1Q14766 1721 aa11.8□□□□□ -0.52
HDAC9-225ENST00000490851 NOL10Q9BSC4 688 aaKnown RBP11.8□□□□□ -0.52
HDAC9-225ENST00000490851 DBNDD1Q9H9R9 158 aa11.8□□□□□ -0.52
HDAC9-225ENST00000490851 DUOX1Q9NRD9 1551 aa11.8□□□□□ -0.52
HDAC9-225ENST00000490851 HPS5Q9UPZ3 1129 aa11.8□□□□□ -0.52
HDAC9-225ENST00000490851 CNPY2Q9Y2B0 182 aa11.8□□□□□ -0.52
HDAC9-225ENST00000490851 H3BQV1 296 aa11.79□□□□□ -0.52
HDAC9-225ENST00000490851 RANBP6O60518 1105 aaKnown RBP11.79□□□□□ -0.52
HDAC9-225ENST00000490851 GSTO1P78417 241 aa11.79□□□□□ -0.52
HDAC9-225ENST00000490851 GUCY1B3Q02153 619 aa11.79□□□□□ -0.52
HDAC9-225ENST00000490851 IFFO2Q5TF58 517 aa11.79□□□□□ -0.52
HDAC9-225ENST00000490851 FAM173BQ6P4H8 233 aa11.79□□□□□ -0.52
HDAC9-225ENST00000490851 RNF41Q9H4P4 317 aaPredicted RBP11.79□□□□□ -0.52
HDAC9-225ENST00000490851 MCM9Q9NXL9 1143 aa11.79□□□□□ -0.52
HDAC9-225ENST00000490851 CPLX1O14810 134 aa11.79□□□□□ -0.52
HDAC9-225ENST00000490851 FIBPO43427 364 aa11.79□□□□□ -0.52
HDAC9-225ENST00000490851 USP17L8P0C7I0 530 aa11.79□□□□□ -0.52
HDAC9-225ENST00000490851 BTDP43251 543 aa11.79□□□□□ -0.52
HDAC9-225ENST00000490851 LY9Q9HBG7 655 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms