RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 SMC5Q8IY18 1101 aa9.35□□□□□ -0.91
CLDN1-202ENST00000490800 KAZALD1Q96I82 304 aa9.35□□□□□ -0.91
CLDN1-202ENST00000490800 SUCLG2Q96I99 432 aa9.35□□□□□ -0.91
CLDN1-202ENST00000490800 HS3ST6Q96QI5 342 aa9.35□□□□□ -0.91
CLDN1-202ENST00000490800 GOPCQ9HD26 462 aa9.35□□□□□ -0.91
CLDN1-202ENST00000490800 LRRFIP2Q9Y608 721 aaKnown RBP9.35□□□□□ -0.91
CLDN1-202ENST00000490800 UTYO14607 1347 aa9.34□□□□□ -0.91
CLDN1-202ENST00000490800 IRS2Q9Y4H2 1338 aa9.34□□□□□ -0.91
CLDN1-202ENST00000490800 POLR2AP24928 1970 aaKnown RBP9.34□□□□□ -0.91
CLDN1-202ENST00000490800 CA12O43570 354 aa9.34□□□□□ -0.91
CLDN1-202ENST00000490800 SASH1O94885 1247 aa9.34□□□□□ -0.91
CLDN1-202ENST00000490800 C15orf52Q6ZUT6 534 aaKnown RBP9.34□□□□□ -0.91
CLDN1-202ENST00000490800 MOB2Q70IA6 237 aa9.34□□□□□ -0.91
CLDN1-202ENST00000490800 ZNF687Q8N1G0 1237 aa9.34□□□□□ -0.91
CLDN1-202ENST00000490800 CSRNP1Q96S65 589 aa9.34□□□□□ -0.91
CLDN1-202ENST00000490800 PUS3Q9BZE2 481 aaKnown RBP9.34□□□□□ -0.91
CLDN1-202ENST00000490800 CNNM1Q9NRU3 951 aa9.34□□□□□ -0.91
CLDN1-202ENST00000490800 RABGEF1Q9UJ41 708 aa9.34□□□□□ -0.91
CLDN1-202ENST00000490800 HDAC9Q9UKV0 1011 aa9.34□□□□□ -0.91
CLDN1-202ENST00000490800 PITPNM2Q9BZ72 1349 aa9.33□□□□□ -0.92
CLDN1-202ENST00000490800 UBE2Q2LH0YL09 131 aa9.33□□□□□ -0.92
CLDN1-202ENST00000490800 IL1R1P14778 569 aa9.33□□□□□ -0.92
CLDN1-202ENST00000490800 MMP14P50281 582 aa9.33□□□□□ -0.92
CLDN1-202ENST00000490800 FKBP1BP68106 108 aa9.33□□□□□ -0.92
CLDN1-202ENST00000490800 ATP8B2P98198 1209 aa9.33□□□□□ -0.92
CLDN1-202ENST00000490800 ZNF804AQ7Z570 1209 aa9.33□□□□□ -0.92
CLDN1-202ENST00000490800 CERS5Q8N5B7 392 aa9.33□□□□□ -0.92
CLDN1-202ENST00000490800 RDH13Q8NBN7 331 aa9.33□□□□□ -0.92
CLDN1-202ENST00000490800 ABHD8Q96I13 439 aa9.33□□□□□ -0.92
CLDN1-202ENST00000490800 POLR3EQ9NVU0 708 aa9.33□□□□□ -0.92
CLDN1-202ENST00000490800 JAG2Q9Y219 1238 aa9.33□□□□□ -0.92
CLDN1-202ENST00000490800 F8W031 263 aaPredicted RBP9.32□□□□□ -0.92
CLDN1-202ENST00000490800 TRPA1O75762 1119 aa9.32□□□□□ -0.92
CLDN1-202ENST00000490800 SLC10A3P09131 477 aa9.32□□□□□ -0.92
CLDN1-202ENST00000490800 PRKG1Q13976 671 aa9.32□□□□□ -0.92
CLDN1-202ENST00000490800 DLGAP5Q15398 846 aa9.32□□□□□ -0.92
CLDN1-202ENST00000490800 LCE2DQ5TA82 110 aaPredicted RBP9.32□□□□□ -0.92
CLDN1-202ENST00000490800 GCC1Q96CN9 775 aa9.32□□□□□ -0.92
CLDN1-202ENST00000490800 ZBED3Q96IU2 234 aaPredicted RBP9.32□□□□□ -0.92
CLDN1-202ENST00000490800 TBC1D2Q9BYX2 928 aa9.32□□□□□ -0.92
CLDN1-202ENST00000490800 DCTPP1Q9H773 170 aa9.32□□□□□ -0.92
CLDN1-202ENST00000490800 RNF186Q9NXI6 227 aa9.32□□□□□ -0.92
CLDN1-202ENST00000490800 VPS9D1Q9Y2B5 631 aa9.32□□□□□ -0.92
CLDN1-202ENST00000490800 PCDHAC2Q9Y5I4 1007 aa9.32□□□□□ -0.92
CLDN1-202ENST00000490800 MYH3P11055 1940 aa9.31□□□□□ -0.92
CLDN1-202ENST00000490800 PNMA6EA0A0J9YXQ4 647 aa9.31□□□□□ -0.92
CLDN1-202ENST00000490800 POTEB3A0JP26 581 aa9.31□□□□□ -0.92
CLDN1-202ENST00000490800 HMMRO75330 724 aa9.31□□□□□ -0.92
CLDN1-202ENST00000490800 CD46P15529 392 aa9.31□□□□□ -0.92
CLDN1-202ENST00000490800 GYG1P46976 350 aa9.31□□□□□ -0.92
CLDN1-202ENST00000490800 NUCB1Q02818 461 aa9.31□□□□□ -0.92
CLDN1-202ENST00000490800 UBE4AQ14139 1066 aa9.31□□□□□ -0.92
CLDN1-202ENST00000490800 MYSM1Q5VVJ2 828 aa9.31□□□□□ -0.92
CLDN1-202ENST00000490800 POTEBQ6S5H4 581 aa9.31□□□□□ -0.92
CLDN1-202ENST00000490800 RASAL3Q86YV0 1011 aa9.31□□□□□ -0.92
CLDN1-202ENST00000490800 FAM84BQ96KN1 310 aaPredicted RBP9.31□□□□□ -0.92
CLDN1-202ENST00000490800 PRMT6Q96LA8 375 aaPredicted RBP9.31□□□□□ -0.92
CLDN1-202ENST00000490800 SLC4A5Q9BY07 1137 aa9.31□□□□□ -0.92
CLDN1-202ENST00000490800 BICC1Q9H694 974 aaKnown RBP9.31□□□□□ -0.92
CLDN1-202ENST00000490800 HDAC5Q9UQL6 1122 aa9.31□□□□□ -0.92
CLDN1-202ENST00000490800 RIPOR2Q9Y4F9 1068 aa9.31□□□□□ -0.92
CLDN1-202ENST00000490800 SPEF2Q9C093 1822 aa9.31□□□□□ -0.92
CLDN1-202ENST00000490800 THSD7BQ9C0I4 1608 aa9.31□□□□□ -0.92
CLDN1-202ENST00000490800 CCDC85CA6NKD9 419 aa9.3□□□□□ -0.92
CLDN1-202ENST00000490800 HIBADHP31937 336 aaKnown RBP9.3□□□□□ -0.92
CLDN1-202ENST00000490800 NF2P35240 595 aa9.3□□□□□ -0.92
CLDN1-202ENST00000490800 FKBP1AP62942 108 aaKnown RBP9.3□□□□□ -0.92
CLDN1-202ENST00000490800 MTX1Q13505 466 aa9.3□□□□□ -0.92
CLDN1-202ENST00000490800 SKIV2LQ15477 1246 aaKnown RBP9.3□□□□□ -0.92
CLDN1-202ENST00000490800 RABL6Q3YEC7 729 aaPredicted RBP9.3□□□□□ -0.92
CLDN1-202ENST00000490800 CFAP100Q494V2 611 aa9.3□□□□□ -0.92
CLDN1-202ENST00000490800 LRRC24Q50LG9 513 aa9.3□□□□□ -0.92
CLDN1-202ENST00000490800 SWT1Q5T5J6 900 aaKnown RBP9.3□□□□□ -0.92
CLDN1-202ENST00000490800 APOBEC3FQ8IUX4 373 aaKnown RBP9.3□□□□□ -0.92
CLDN1-202ENST00000490800 MTMR14Q8NCE2 650 aa9.3□□□□□ -0.92
CLDN1-202ENST00000490800 TDRD7Q8NHU6 1098 aaKnown RBP9.3□□□□□ -0.92
CLDN1-202ENST00000490800 KLHDC4Q8TBB5 520 aa9.3□□□□□ -0.92
CLDN1-202ENST00000490800 SSH3Q8TE77 659 aa9.3□□□□□ -0.92
CLDN1-202ENST00000490800 MCOLN1Q9GZU1 580 aa9.3□□□□□ -0.92
CLDN1-202ENST00000490800 DEFB129Q9H1M3 183 aa9.3□□□□□ -0.92
CLDN1-202ENST00000490800 FZD1Q9UP38 647 aa9.3□□□□□ -0.92
CLDN1-202ENST00000490800 CLRN2A0PK11 232 aa9.29□□□□□ -0.92
CLDN1-202ENST00000490800 RGS3P49796 1198 aa9.29□□□□□ -0.92
CLDN1-202ENST00000490800 RBM5P52756 815 aaKnown RBP eCLIP9.29□□□□□ -0.92
CLDN1-202ENST00000490800 PTPN12Q05209 780 aaKnown RBP9.29□□□□□ -0.92
CLDN1-202ENST00000490800 DGKZQ13574 1117 aa9.29□□□□□ -0.92
CLDN1-202ENST00000490800 CHD1LQ86WJ1 897 aa9.29□□□□□ -0.92
CLDN1-202ENST00000490800 PROCA1Q8NCQ7 364 aaPredicted RBP9.29□□□□□ -0.92
CLDN1-202ENST00000490800 NBPF3Q9H094 633 aa9.29□□□□□ -0.92
CLDN1-202ENST00000490800 SAGE1Q9NXZ1 904 aa9.29□□□□□ -0.92
CLDN1-202ENST00000490800 AOX1Q06278 1338 aa9.29□□□□□ -0.92
CLDN1-202ENST00000490800 FAM205AQ6ZU69 1335 aa9.29□□□□□ -0.92
CLDN1-202ENST00000490800 MROH5Q6ZUA9 1318 aa9.29□□□□□ -0.92
CLDN1-202ENST00000490800 PSME4Q14997 1843 aa9.28□□□□□ -0.92
CLDN1-202ENST00000490800 SRGAP3O43295 1099 aa9.28□□□□□ -0.92
CLDN1-202ENST00000490800 MYO1BO43795 1136 aa9.28□□□□□ -0.92
CLDN1-202ENST00000490800 PDE8BO95263 885 aa9.28□□□□□ -0.92
CLDN1-202ENST00000490800 CLK2P49760 499 aaKnown RBP9.28□□□□□ -0.92
CLDN1-202ENST00000490800 METTL24Q5JXM2 366 aa9.28□□□□□ -0.92
CLDN1-202ENST00000490800 MFSD14BQ5SR56 506 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms