RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 DDX4Q9NQI0 724 aaKnown RBP25.83■■□□□ 1.73
SYNE4-205ENST00000490730 ATRNL1Q5VV63 1379 aa25.82■■□□□ 1.72
SYNE4-205ENST00000490730 CENPFP49454 3210 aa25.82■■□□□ 1.72
SYNE4-205ENST00000490730 ARID4AP29374 1257 aaPredicted RBP25.82■■□□□ 1.72
SYNE4-205ENST00000490730 GSTO1P78417 241 aa25.82■■□□□ 1.72
SYNE4-205ENST00000490730 PICK1Q9NRD5 415 aa25.82■■□□□ 1.72
SYNE4-205ENST00000490730 KCNH4Q9UQ05 1017 aa25.82■■□□□ 1.72
SYNE4-205ENST00000490730 DDTLA6NHG4 134 aaPredicted RBP25.81■■□□□ 1.72
SYNE4-205ENST00000490730 PDHXO00330 501 aa25.81■■□□□ 1.72
SYNE4-205ENST00000490730 UQCRFS1P1P0C7P4 283 aa25.81■■□□□ 1.72
SYNE4-205ENST00000490730 MCAMP43121 646 aa25.81■■□□□ 1.72
SYNE4-205ENST00000490730 ANKRD23Q86SG2 305 aa25.81■■□□□ 1.72
SYNE4-205ENST00000490730 ZNF384Q8TF68 577 aa25.81■■□□□ 1.72
SYNE4-205ENST00000490730 ARHGAP39Q9C0H5 1083 aa25.81■■□□□ 1.72
SYNE4-205ENST00000490730 PTCH2Q9Y6C5 1203 aa25.81■■□□□ 1.72
SYNE4-205ENST00000490730 GPR75-ASB3A0A0A6YYF3 556 aa25.8■■□□□ 1.72
SYNE4-205ENST00000490730 POTEFA5A3E0 1075 aa25.8■■□□□ 1.72
SYNE4-205ENST00000490730 LDHCP07864 332 aa25.8■■□□□ 1.72
SYNE4-205ENST00000490730 POLA2Q14181 598 aa25.8■■□□□ 1.72
SYNE4-205ENST00000490730 SCYL3Q8IZE3 742 aa25.8■■□□□ 1.72
SYNE4-205ENST00000490730 NSUN4Q96CB9 384 aaKnown RBP25.8■■□□□ 1.72
SYNE4-205ENST00000490730 LRP2BPQ9P2M1 347 aa25.8■■□□□ 1.72
SYNE4-205ENST00000490730 CPA4Q9UI42 421 aa25.8■■□□□ 1.72
SYNE4-205ENST00000490730 PHF20L1A8MW92 1017 aa25.79■■□□□ 1.72
SYNE4-205ENST00000490730 SURF6O75683 361 aaKnown RBP25.79■■□□□ 1.72
SYNE4-205ENST00000490730 SLURP2P0DP57 97 aa25.79■■□□□ 1.72
SYNE4-205ENST00000490730 LACTBP83111 547 aaPredicted RBP25.79■■□□□ 1.72
SYNE4-205ENST00000490730 ATP8B2P98198 1209 aa25.79■■□□□ 1.72
SYNE4-205ENST00000490730 SLC9C1Q4G0N8 1177 aa25.79■■□□□ 1.72
SYNE4-205ENST00000490730 TTC39AQ5SRH9 613 aa25.79■■□□□ 1.72
SYNE4-205ENST00000490730 SSH3Q8TE77 659 aa25.79■■□□□ 1.72
SYNE4-205ENST00000490730 ARMC5Q96C12 935 aa25.79■■□□□ 1.72
SYNE4-205ENST00000490730 SNRKQ9NRH2 765 aa25.79■■□□□ 1.72
SYNE4-205ENST00000490730 ZHX2Q9Y6X8 837 aa25.79■■□□□ 1.72
SYNE4-205ENST00000490730 DOCK1Q14185 1865 aa25.79■■□□□ 1.72
SYNE4-205ENST00000490730 RLBP1P12271 317 aa25.78■■□□□ 1.72
SYNE4-205ENST00000490730 RHBDL3P58872 404 aa25.78■■□□□ 1.72
SYNE4-205ENST00000490730 TNNI3KQ59H18 835 aa25.78■■□□□ 1.72
SYNE4-205ENST00000490730 FPGT-TNNI3KV9GXZ4 949 aa25.78■■□□□ 1.72
SYNE4-205ENST00000490730 CCDC158Q5M9N0 1113 aa25.77■■□□□ 1.72
SYNE4-205ENST00000490730 DBNDD2Q9BQY9 259 aa25.77■■□□□ 1.72
SYNE4-205ENST00000490730 NOL10Q9BSC4 688 aaKnown RBP25.77■■□□□ 1.72
SYNE4-205ENST00000490730 RBBP6Q7Z6E9 1792 aaKnown RBP25.77■■□□□ 1.72
SYNE4-205ENST00000490730 CXCL11O14625 94 aa25.76■■□□□ 1.71
SYNE4-205ENST00000490730 PTPRAP18433 802 aa25.76■■□□□ 1.71
SYNE4-205ENST00000490730 MOGSQ13724 837 aa25.76■■□□□ 1.71
SYNE4-205ENST00000490730 GPR108Q9NPR9 543 aa25.76■■□□□ 1.71
SYNE4-205ENST00000490730 MAST2Q6P0Q8 1798 aa25.75■■□□□ 1.71
SYNE4-205ENST00000490730 FAM196BA6NMK8 535 aa25.75■■□□□ 1.71
SYNE4-205ENST00000490730 MYCP01106 439 aaPredicted RBP25.75■■□□□ 1.71
SYNE4-205ENST00000490730 C17orf99Q6UX52 265 aa25.75■■□□□ 1.71
SYNE4-205ENST00000490730 GADL1Q6ZQY3 521 aa25.75■■□□□ 1.71
SYNE4-205ENST00000490730 NBPF11Q86T75 865 aa25.75■■□□□ 1.71
SYNE4-205ENST00000490730 PARK7Q99497 189 aaKnown RBP25.75■■□□□ 1.71
SYNE4-205ENST00000490730 ZBED9Q6R2W3 1325 aa25.74■■□□□ 1.71
SYNE4-205ENST00000490730 CTNND1O60716 968 aaKnown RBP25.74■■□□□ 1.71
SYNE4-205ENST00000490730 PRPF38BQ5VTL8 546 aaKnown RBP25.74■■□□□ 1.71
SYNE4-205ENST00000490730 TEX11Q8IYF3 940 aa25.74■■□□□ 1.71
SYNE4-205ENST00000490730 ZNF333Q96JL9 665 aa25.74■■□□□ 1.71
SYNE4-205ENST00000490730 TMEM106CQ9BVX2 250 aa25.74■■□□□ 1.71
SYNE4-205ENST00000490730 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.74■■□□□ 1.71
SYNE4-205ENST00000490730 KIAA0100Q14667 2235 aaKnown RBP25.73■■□□□ 1.71
SYNE4-205ENST00000490730 ZBTB7BO15156 539 aaPredicted RBP25.73■■□□□ 1.71
SYNE4-205ENST00000490730 CYP2C8P10632 490 aa25.73■■□□□ 1.71
SYNE4-205ENST00000490730 MAP3K10Q02779 954 aa25.73■■□□□ 1.71
SYNE4-205ENST00000490730 NAA16Q6N069 864 aaPredicted RBP25.73■■□□□ 1.71
SYNE4-205ENST00000490730 GPAT2Q6NUI2 795 aa25.73■■□□□ 1.71
SYNE4-205ENST00000490730 FASTKD5Q7L8L6 764 aaKnown RBP25.73■■□□□ 1.71
SYNE4-205ENST00000490730 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.73■■□□□ 1.71
SYNE4-205ENST00000490730 ADGRA2Q96PE1 1338 aa25.72■■□□□ 1.71
SYNE4-205ENST00000490730 A0A0G2JLL6 359 aaPredicted RBP25.72■■□□□ 1.71
SYNE4-205ENST00000490730 TRIM75PA6NK02 468 aa25.72■■□□□ 1.71
SYNE4-205ENST00000490730 FMNL1O95466 1100 aaPredicted RBP25.72■■□□□ 1.71
SYNE4-205ENST00000490730 MAP4K4O95819 1239 aaPredicted RBP25.72■■□□□ 1.71
SYNE4-205ENST00000490730 GNRH1P01148 92 aa25.72■■□□□ 1.71
SYNE4-205ENST00000490730 PSMC4P43686 418 aa25.72■■□□□ 1.71
SYNE4-205ENST00000490730 PRRT2Q7Z6L0 340 aaPredicted RBP25.72■■□□□ 1.71
SYNE4-205ENST00000490730 CCDC84Q86UT8 332 aaPredicted RBP25.72■■□□□ 1.71
SYNE4-205ENST00000490730 SH3RF3Q8TEJ3 882 aaPredicted RBP25.72■■□□□ 1.71
SYNE4-205ENST00000490730 SH3TC2Q8TF17 1288 aa25.72■■□□□ 1.71
SYNE4-205ENST00000490730 OSBPL5Q9H0X9 879 aaPredicted RBP25.72■■□□□ 1.71
SYNE4-205ENST00000490730 AFG3L2Q9Y4W6 797 aa25.72■■□□□ 1.71
SYNE4-205ENST00000490730 PHIPQ8WWQ0 1821 aa25.72■■□□□ 1.71
SYNE4-205ENST00000490730 PTPRFP10586 1907 aa25.71■■□□□ 1.71
SYNE4-205ENST00000490730 NPM3O75607 178 aaKnown RBP25.71■■□□□ 1.71
SYNE4-205ENST00000490730 EN2P19622 333 aaPredicted RBP25.71■■□□□ 1.71
SYNE4-205ENST00000490730 SLC4A8Q2Y0W8 1093 aa25.71■■□□□ 1.71
SYNE4-205ENST00000490730 AATFQ9NY61 560 aaKnown RBP eCLIP25.71■■□□□ 1.71
SYNE4-205ENST00000490730 MYO5AQ9Y4I1 1855 aaKnown RBP25.7■■□□□ 1.71
SYNE4-205ENST00000490730 PANK1Q8TE04 598 aa25.7■■□□□ 1.7
SYNE4-205ENST00000490730 TRIM47Q96LD4 638 aa25.7■■□□□ 1.7
SYNE4-205ENST00000490730 CCDC8Q9H0W5 538 aaPredicted RBP25.7■■□□□ 1.7
SYNE4-205ENST00000490730 ATAD5Q96QE3 1844 aa25.7■■□□□ 1.7
SYNE4-205ENST00000490730 COL2A1P02458 1487 aaPredicted RBP25.69■■□□□ 1.7
SYNE4-205ENST00000490730 TBC1D12O60347 775 aa25.69■■□□□ 1.7
SYNE4-205ENST00000490730 BAG3O95817 575 aa25.69■■□□□ 1.7
SYNE4-205ENST00000490730 CYP2E1P05181 493 aaPredicted RBP25.69■■□□□ 1.7
SYNE4-205ENST00000490730 CTGFP29279 349 aa25.69■■□□□ 1.7
SYNE4-205ENST00000490730 TLR7Q9NYK1 1049 aaKnown RBP25.69■■□□□ 1.7
SYNE4-205ENST00000490730 DBNLQ9UJU6 430 aaKnown RBP25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms