RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 ADD2P35612 726 aa11.27□□□□□ -0.61
SUPT20H-220ENST00000490716 CCDC102AQ96A19 550 aa11.27□□□□□ -0.61
SUPT20H-220ENST00000490716 WNK4Q96J92 1243 aa11.27□□□□□ -0.61
SUPT20H-220ENST00000490716 OSBPL5Q9H0X9 879 aaPredicted RBP11.27□□□□□ -0.61
SUPT20H-220ENST00000490716 TAOK2Q9UL54 1235 aa11.27□□□□□ -0.61
SUPT20H-220ENST00000490716 FLT1P17948 1338 aa11.26□□□□□ -0.61
SUPT20H-220ENST00000490716 SMARCA5O60264 1052 aaPredicted RBP11.26□□□□□ -0.61
SUPT20H-220ENST00000490716 NUCB1Q02818 461 aa11.26□□□□□ -0.61
SUPT20H-220ENST00000490716 SPDYE5A6NIY4 337 aa11.26□□□□□ -0.61
SUPT20H-220ENST00000490716 TNFAIP1Q13829 316 aa11.26□□□□□ -0.61
SUPT20H-220ENST00000490716 ERICH6Q7L0X2 663 aa11.26□□□□□ -0.61
SUPT20H-220ENST00000490716 VPS37DQ86XT2 251 aa11.26□□□□□ -0.61
SUPT20H-220ENST00000490716 C2orf69Q8N8R5 385 aa11.26□□□□□ -0.61
SUPT20H-220ENST00000490716 EXOC6Q8TAG9 804 aa11.26□□□□□ -0.61
SUPT20H-220ENST00000490716 HSPA1AP0DMV8 641 aaKnown RBP11.26□□□□□ -0.61
SUPT20H-220ENST00000490716 HSPA1BP0DMV9 641 aaKnown RBP11.26□□□□□ -0.61
SUPT20H-220ENST00000490716 VGLL4Q14135 290 aa11.26□□□□□ -0.61
SUPT20H-220ENST00000490716 UBE2Q2LH0YL09 131 aa11.25□□□□□ -0.61
SUPT20H-220ENST00000490716 SLURP2P0DP57 97 aa11.25□□□□□ -0.61
SUPT20H-220ENST00000490716 HUNKP57058 714 aa11.25□□□□□ -0.61
SUPT20H-220ENST00000490716 NOGQ13253 232 aa11.25□□□□□ -0.61
SUPT20H-220ENST00000490716 EHD4Q9H223 541 aa11.25□□□□□ -0.61
SUPT20H-220ENST00000490716 SNRKQ9NRH2 765 aa11.25□□□□□ -0.61
SUPT20H-220ENST00000490716 CCDC158Q5M9N0 1113 aa11.25□□□□□ -0.61
SUPT20H-220ENST00000490716 POTEEQ6S8J3 1075 aa11.25□□□□□ -0.61
SUPT20H-220ENST00000490716 GCC1Q96CN9 775 aa11.25□□□□□ -0.61
SUPT20H-220ENST00000490716 LRRC37A2A6NM11 1700 aa11.25□□□□□ -0.61
SUPT20H-220ENST00000490716 RGS3P49796 1198 aa11.25□□□□□ -0.61
SUPT20H-220ENST00000490716 EVX2Q03828 476 aa11.25□□□□□ -0.61
SUPT20H-220ENST00000490716 GPAT2Q6NUI2 795 aa11.25□□□□□ -0.61
SUPT20H-220ENST00000490716 EDC3Q96F86 508 aaKnown RBP11.25□□□□□ -0.61
SUPT20H-220ENST00000490716 NEUROD6Q96NK8 337 aa11.25□□□□□ -0.61
SUPT20H-220ENST00000490716 ECE1P42892 770 aa11.24□□□□□ -0.61
SUPT20H-220ENST00000490716 ZCCHC17Q9NP64 241 aaKnown RBP11.24□□□□□ -0.61
SUPT20H-220ENST00000490716 USP40Q9NVE5 1235 aa11.24□□□□□ -0.61
SUPT20H-220ENST00000490716 TCP10L2B9ZVM9 353 aa11.24□□□□□ -0.61
SUPT20H-220ENST00000490716 PDE6AP16499 860 aa11.24□□□□□ -0.61
SUPT20H-220ENST00000490716 UBE3CQ15386 1083 aa11.24□□□□□ -0.61
SUPT20H-220ENST00000490716 SLFNL1Q499Z3 407 aa11.24□□□□□ -0.61
SUPT20H-220ENST00000490716 TTC39AQ5SRH9 613 aa11.24□□□□□ -0.61
SUPT20H-220ENST00000490716 RNF186Q9NXI6 227 aa11.24□□□□□ -0.61
SUPT20H-220ENST00000490716 AFG3L2Q9Y4W6 797 aa11.24□□□□□ -0.61
SUPT20H-220ENST00000490716 IGF2BP3O00425 579 aaKnown RBP eCLIP11.24□□□□□ -0.61
SUPT20H-220ENST00000490716 KIF23Q02241 960 aaPredicted RBP11.24□□□□□ -0.61
SUPT20H-220ENST00000490716 SUPT20HL1Q3ZLR7 823 aa11.24□□□□□ -0.61
SUPT20H-220ENST00000490716 FBXW7Q969H0 707 aa11.24□□□□□ -0.61
SUPT20H-220ENST00000490716 R3HDMLQ9H3Y0 253 aa11.24□□□□□ -0.61
SUPT20H-220ENST00000490716 GUCY1A2P33402 732 aa11.23□□□□□ -0.61
SUPT20H-220ENST00000490716 GSTO1P78417 241 aa11.23□□□□□ -0.61
SUPT20H-220ENST00000490716 MAP2K1Q02750 393 aaPredicted RBP11.23□□□□□ -0.61
SUPT20H-220ENST00000490716 MYO1BO43795 1136 aa11.23□□□□□ -0.61
SUPT20H-220ENST00000490716 PDE4AP27815 886 aa11.23□□□□□ -0.61
SUPT20H-220ENST00000490716 NOVP48745 357 aa11.23□□□□□ -0.61
SUPT20H-220ENST00000490716 ANKRD13AQ8IZ07 590 aa11.23□□□□□ -0.61
SUPT20H-220ENST00000490716 CLASRPQ8N2M8 674 aaKnown RBP11.23□□□□□ -0.61
SUPT20H-220ENST00000490716 CNKSR2Q8WXI2 1034 aa11.23□□□□□ -0.61
SUPT20H-220ENST00000490716 PAG1Q9NWQ8 432 aa11.23□□□□□ -0.61
SUPT20H-220ENST00000490716 DYNLL1P63167 89 aaKnown RBP11.23□□□□□ -0.61
SUPT20H-220ENST00000490716 ECHDC1Q9NTX5 307 aa11.23□□□□□ -0.61
SUPT20H-220ENST00000490716 TTF1Q15361 905 aaPredicted RBP11.22□□□□□ -0.61
SUPT20H-220ENST00000490716 CERS3Q8IU89 383 aa11.22□□□□□ -0.61
SUPT20H-220ENST00000490716 IGHA2P01877 340 aa11.22□□□□□ -0.61
SUPT20H-220ENST00000490716 MAP3K9P80192 1104 aa11.22□□□□□ -0.61
SUPT20H-220ENST00000490716 SH3D19Q5HYK7 790 aa11.22□□□□□ -0.61
SUPT20H-220ENST00000490716 SUPT16HQ9Y5B9 1047 aaKnown RBP11.22□□□□□ -0.61
SUPT20H-220ENST00000490716 TACC3Q9Y6A5 838 aa11.22□□□□□ -0.61
SUPT20H-220ENST00000490716 A0A0G2JLL6 359 aaPredicted RBP11.22□□□□□ -0.61
SUPT20H-220ENST00000490716 PPIL2Q13356 520 aa11.22□□□□□ -0.61
SUPT20H-220ENST00000490716 PRRT2Q7Z6L0 340 aaPredicted RBP11.22□□□□□ -0.61
SUPT20H-220ENST00000490716 IFNL1Q8IU54 200 aa11.22□□□□□ -0.61
SUPT20H-220ENST00000490716 SLF2Q8IX21 1173 aa11.22□□□□□ -0.61
SUPT20H-220ENST00000490716 PPATQ06203 517 aa11.21□□□□□ -0.61
SUPT20H-220ENST00000490716 PLEKHM2Q8IWE5 1019 aa11.21□□□□□ -0.61
SUPT20H-220ENST00000490716 KBTBD3Q8NAB2 608 aa11.21□□□□□ -0.61
SUPT20H-220ENST00000490716 ABT1Q9ULW3 272 aaKnown RBP11.21□□□□□ -0.61
SUPT20H-220ENST00000490716 PLIN4Q96Q06 1357 aa11.21□□□□□ -0.61
SUPT20H-220ENST00000490716 CA12O43570 354 aa11.21□□□□□ -0.61
SUPT20H-220ENST00000490716 FGRP09769 529 aa11.21□□□□□ -0.61
SUPT20H-220ENST00000490716 COL13A1Q5TAT6 717 aaPredicted RBP11.21□□□□□ -0.61
SUPT20H-220ENST00000490716 SIAH1Q8IUQ4 282 aa11.21□□□□□ -0.61
SUPT20H-220ENST00000490716 BRI3BPQ8WY22 251 aa11.21□□□□□ -0.61
SUPT20H-220ENST00000490716 ZNF532Q9HCE3 1301 aa11.21□□□□□ -0.62
SUPT20H-220ENST00000490716 ZNF157P51786 506 aaPredicted RBP11.21□□□□□ -0.62
SUPT20H-220ENST00000490716 ARMC9Q7Z3E5 817 aa11.21□□□□□ -0.62
SUPT20H-220ENST00000490716 PUS7LQ9H0K6 701 aaKnown RBP11.21□□□□□ -0.62
SUPT20H-220ENST00000490716 SLC45A1Q9Y2W3 748 aa11.21□□□□□ -0.62
SUPT20H-220ENST00000490716 ZMYM6O95789 1325 aa11.2□□□□□ -0.62
SUPT20H-220ENST00000490716 SMIM22K7EJ46 135 aa11.2□□□□□ -0.62
SUPT20H-220ENST00000490716 PTPRAP18433 802 aa11.2□□□□□ -0.62
SUPT20H-220ENST00000490716 INPP5BP32019 993 aa11.2□□□□□ -0.62
SUPT20H-220ENST00000490716 TNNI2P48788 182 aa11.2□□□□□ -0.62
SUPT20H-220ENST00000490716 LCORLQ8N3X6 602 aa11.2□□□□□ -0.62
SUPT20H-220ENST00000490716 PDE1AP54750 535 aa11.2□□□□□ -0.62
SUPT20H-220ENST00000490716 SHROOM1Q2M3G4 852 aaPredicted RBP11.2□□□□□ -0.62
SUPT20H-220ENST00000490716 NAA16Q6N069 864 aaPredicted RBP11.2□□□□□ -0.62
SUPT20H-220ENST00000490716 MAGEB6Q8N7X4 407 aa11.2□□□□□ -0.62
SUPT20H-220ENST00000490716 OPTNQ96CV9 577 aa11.2□□□□□ -0.62
SUPT20H-220ENST00000490716 ZNF341Q9BYN7 854 aa11.2□□□□□ -0.62
SUPT20H-220ENST00000490716 ANGEL1Q9UNK9 670 aaKnown RBP11.2□□□□□ -0.62
SUPT20H-220ENST00000490716 PLXNA1Q9UIW2 1896 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms